* installing *source* package ‘VBLPCM’ ...
** this is package ‘VBLPCM’ version ‘2.4.9’
** package ‘VBLPCM’ successfully unpacked and MD5 sums checked
** using staged installation
checking for gsl-config... /usr/bin/gsl-config
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C compiler: ‘clang version 22.1.0 (https://github.com/llvm/llvm-project 4434dabb69916856b824f68a64b029c67175e532)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/VBLPCM/src'
clang-22 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `gsl-config --cflags` -isystem /usr/local/clang22/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c KL_funcs.c -o KL_funcs.o
clang-22 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `gsl-config --cflags` -isystem /usr/local/clang22/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c VBLPCM.c -o VBLPCM.o
VBLPCM.c:126:20: warning: allocation of insufficient size '4' for type 'double' with size '8' [-Walloc-size]
126 | double *old_xi_n=calloc(1,sizeof(int)), *old_xi_e, *old_psi2_n=calloc(1,sizeof(int)), *old_psi2_e, *old_z, *old_sigma2, *old_alpha,
| ^
VBLPCM.c:126:66: warning: allocation of insufficient size '4' for type 'double' with size '8' [-Walloc-size]
126 | double *old_xi_n=calloc(1,sizeof(int)), *old_xi_e, *old_psi2_n=calloc(1,sizeof(int)), *old_psi2_e, *old_z, *old_sigma2, *old_alpha,
| ^
2 warnings generated.
clang-22 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `gsl-config --cflags` -isystem /usr/local/clang22/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c adjacency_to_edges.c -o adjacency_to_edges.o
clang-22 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `gsl-config --cflags` -isystem /usr/local/clang22/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c bb.c -o bb.o
clang-22 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `gsl-config --cflags` -isystem /usr/local/clang22/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c fruchterman_reingold.c -o fruchterman_reingold.o
clang-22 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `gsl-config --cflags` -isystem /usr/local/clang22/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c funcs.c -o funcs.o
clang-22 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `gsl-config --cflags` -isystem /usr/local/clang22/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c init.c -o init.o
clang-22 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `gsl-config --cflags` -isystem /usr/local/clang22/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c likelihoods.c -o likelihoods.o
clang-22 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `gsl-config --cflags` -isystem /usr/local/clang22/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c ll_layout.c -o ll_layout.o
clang-22 -std=gnu23 -shared -L/usr/local/clang/lib64 -L/usr/local/clang22/lib -L/usr/local/clang22/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -L/usr/local/clang21/lib/clang/22/lib/x86_64-unknown-linux-gnu -o VBLPCM.so KL_funcs.o VBLPCM.o adjacency_to_edges.o bb.o fruchterman_reingold.o funcs.o init.o likelihoods.o ll_layout.o -lgsl -lgslcblas -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/VBLPCM/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/VBLPCM/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/VBLPCM/src'
installing to /data/gannet/ripley/R/packages/tests-clang/VBLPCM.Rcheck/00LOCK-VBLPCM/00new/VBLPCM/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (VBLPCM)