Install log for 'SpatialPack'

* installing *source* package ‘SpatialPack’ ...
** this is package ‘SpatialPack’ version ‘0.4-1’
** package ‘SpatialPack’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 20.1.7’
using Fortran compiler: ‘flang version 20.1.7’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/SpatialPack/src'
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/fastmatrix/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c R_init_SpatialPack.c -o R_init_SpatialPack.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/fastmatrix/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c base.c -o base.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/fastmatrix/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c brent.c -o brent.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/fastmatrix/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c codisp.c -o codisp.o
flang-20  -fpic  -O2 -pedantic  -c codisp_direction.f -o codisp_direction.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/fastmatrix/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c cor_spatial.c -o cor_spatial.o
flang-20  -fpic  -O2 -pedantic  -c denoise.f -o denoise.o
./denoise.f:369:7: warning: Reference to the procedure 'moments' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object shapes
        call moments(window, n, mean, var)
        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./denoise.f:52:7: previous reference to 'moments'
        call moments(x, nobs, xbar, xvar)
        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./denoise.f:395:7: warning: Reference to the procedure 'moments' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object shapes
        call moments(window, n, mean, var)
        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./denoise.f:52:7: previous reference to 'moments'
        call moments(x, nobs, xbar, xvar)
        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./denoise.f:426:7: warning: Reference to the procedure 'moments' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object shapes
        call moments(window, n, mean, var)
        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./denoise.f:52:7: previous reference to 'moments'
        call moments(x, nobs, xbar, xvar)
        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./denoise.f:454:7: warning: Reference to the procedure 'moments' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object shapes
        call moments(window, n, mean, var)
        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./denoise.f:52:7: previous reference to 'moments'
        call moments(x, nobs, xbar, xvar)
        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./denoise.f:480:7: warning: Reference to the procedure 'moments' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object shapes
        call moments(window, n, mean, var)
        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./denoise.f:52:7: previous reference to 'moments'
        call moments(x, nobs, xbar, xvar)
        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./denoise.f:510:7: warning: Reference to the procedure 'moments' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object shapes
        call moments(window, n, mean, var)
        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./denoise.f:52:7: previous reference to 'moments'
        call moments(x, nobs, xbar, xvar)
        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/fastmatrix/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c image.c -o image.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/fastmatrix/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c interface.c -o interface.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/fastmatrix/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c mod_ttest.c -o mod_ttest.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/fastmatrix/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c similarity.c -o similarity.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/fastmatrix/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c weights.c -o weights.o
clang-20 -std=gnu23 -shared -L/usr/local/clang/lib64 -L/usr/local/clang20/lib -L/usr/local/clang20/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -L/usr/local/clang20/lib/clang/20/lib/x86_64-unknown-linux-gnu -o SpatialPack.so R_init_SpatialPack.o base.o brent.o codisp.o codisp_direction.o cor_spatial.o denoise.o image.o interface.o mod_ttest.o similarity.o weights.o -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lFortranRuntime -lFortranDecimal -lm -lm -lFortranRuntime -lFortranDecimal -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/SpatialPack/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/SpatialPack/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/SpatialPack/src'
installing to /data/gannet/ripley/R/packages/tests-clang/SpatialPack.Rcheck/00LOCK-SpatialPack/00new/SpatialPack/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SpatialPack)