* installing *source* package ‘SpatialGEV’ ... ** package ‘SpatialGEV’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘clang version 19.1.0’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/SpatialGEV/src' /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/TMB/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c init_dummy_file.cpp -o init_dummy_file.o (cd TMB; /data/gannet/ripley/R/R-clang/bin/Rscript \ --no-save --no-restore compile.R '-I"../../inst/include" ') using C++ compiler: ‘clang version 19.1.0’ make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/SpatialGEV/src/TMB' /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"/data/gannet/ripley/R/test-clang/TMB/include" -I"/data/gannet/ripley/R/test-clang/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_SpatialGEV_TMBExports -DCPPAD_FRAMEWORK -I'/data/gannet/ripley/R/test-clang/TMB/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -I"../../inst/include" -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c SpatialGEV_TMBExports.cpp -o SpatialGEV_TMBExports.o In file included from SpatialGEV_TMBExports.cpp:4: In file included from /data/gannet/ripley/R/test-clang/TMB/include/TMB.hpp:96: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61: /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from SpatialGEV_TMBExports.cpp:4: In file included from /data/gannet/ripley/R/test-clang/TMB/include/TMB.hpp:96: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29: In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35: /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ 3 warnings generated. /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o SpatialGEV_TMBExports.so SpatialGEV_TMBExports.o make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/SpatialGEV/src/TMB' make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/SpatialGEV/src/TMB' make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/SpatialGEV/src/TMB' [1] TRUE /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o SpatialGEV.so init_dummy_file.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/SpatialGEV/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/SpatialGEV/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/SpatialGEV/src' installing to /data/gannet/ripley/R/packages/tests-clang/SpatialGEV.Rcheck/00LOCK-SpatialGEV/00new/SpatialGEV/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SpatialGEV)