* installing *source* package ‘SNPassoc’ ...
** this is package ‘SNPassoc’ version ‘2.3.1’
** package ‘SNPassoc’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 22.1.4 (https://github.com/llvm/llvm-project 35990504507d79e0b9deb809c8ee5e1b34ceef20)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/SNPassoc/src'
clang-22 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang22/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c SNPassoc_init.c -o SNPassoc_init.o
clang-22 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang22/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c groupsum.c -o groupsum.o
clang-22 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang22/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c haplo_em_pin.c -o haplo_em_pin.o
clang-22 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang22/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c louis_info.c -o louis_info.o
clang-22 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang22/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c seqhap.c -o seqhap.o
clang-22 -std=gnu23 -shared -L/usr/local/clang/lib64 -L/usr/local/clang22/lib -L/usr/local/clang22/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -o SNPassoc.so SNPassoc_init.o groupsum.o haplo_em_pin.o louis_info.o seqhap.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/SNPassoc/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/SNPassoc/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/SNPassoc/src'
installing to /data/gannet/ripley/R/packages/tests-clang/SNPassoc.Rcheck/00LOCK-SNPassoc/00new/SNPassoc/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SNPassoc)