* installing *source* package ‘SLOPE’ ...
** this is package ‘SLOPE’ version ‘1.0.1’
** package ‘SLOPE’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 20.1.7’
using C++17
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/SLOPE/src'
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c RcppExports.cpp -o RcppExports.o
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c r-exports.cpp -o r-exports.o
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c rcpp_cv.cpp -o rcpp_cv.o
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c rcpp_slope.cpp -o rcpp_slope.o
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c setup_model.cpp -o setup_model.o
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/clusters.cpp -o slope/clusters.o
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/cv.cpp -o slope/cv.o
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/folds.cpp -o slope/folds.o
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/kkt_check.cpp -o slope/kkt_check.o
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/logger.cpp -o slope/logger.o
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/losses/loss.cpp -o slope/losses/loss.o
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/losses/logistic.cpp -o slope/losses/logistic.o
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/losses/multinomial.cpp -o slope/losses/multinomial.o
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/losses/poisson.cpp -o slope/losses/poisson.o
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/losses/quadratic.cpp -o slope/losses/quadratic.o
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/losses/setup_loss.cpp -o slope/losses/setup_loss.o
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/math.cpp -o slope/math.o
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/normalize.cpp -o slope/normalize.o
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/qnorm.cpp -o slope/qnorm.o
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/regularization_sequence.cpp -o slope/regularization_sequence.o
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/score.cpp -o slope/score.o
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/screening.cpp -o slope/screening.o
In file included from rcpp_cv.cpp:1:
In file included from ./setup_model.h:3:
In file included from ./slope/slope.h:8:
In file included from ./slope/clusters.h:8:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from slope/folds.cpp:1:
In file included from slope/folds.h:11:
In file included from slope/utils.h:9:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from slope/normalize.cpp:1:
In file included from slope/normalize.h:9:
In file included from slope/math.h:8:
In file included from slope/clusters.h:8:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from slope/kkt_check.cpp:2:
In file included from slope/math.h:8:
In file included from slope/clusters.h:8:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from rcpp_slope.cpp:1:
In file included from ./setup_model.h:3:
In file included from ./slope/slope.h:8:
In file included from ./slope/clusters.h:8:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from slope/screening.cpp:6:
In file included from slope/screening.h:12:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from slope/clusters.cpp:1:
In file included from slope/clusters.h:8:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from slope/losses/multinomial.cpp:3:
In file included from slope/losses/../math.h:8:
In file included from slope/losses/../clusters.h:8:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from slope/normalize.cpp:1:
In file included from slope/normalize.h:9:
slope/math.h:795:13: warning: unused variable 'p' [-Wunused-variable]
795 | const int p = x.cols();
| ^
In file included from slope/losses/logistic.cpp:3:
In file included from slope/losses/../math.h:8:
In file included from slope/losses/../clusters.h:8:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from r-exports.cpp:1:
In file included from ./slope/regularization_sequence.h:8:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from slope/math.cpp:1:
In file included from slope/math.h:8:
In file included from slope/clusters.h:8:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from slope/kkt_check.cpp:2:
slope/math.h:795:13: warning: unused variable 'p' [-Wunused-variable]
795 | const int p = x.cols();
| ^
In file included from slope/cv.cpp:1:
In file included from slope/cv.h:13:
In file included from slope/folds.h:11:
In file included from slope/utils.h:9:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from slope/losses/multinomial.cpp:3:
slope/losses/../math.h:795:13: warning: unused variable 'p' [-Wunused-variable]
795 | const int p = x.cols();
| ^
In file included from slope/clusters.cpp:2:
slope/math.h:795:13: warning: unused variable 'p' [-Wunused-variable]
795 | const int p = x.cols();
| ^
In file included from slope/regularization_sequence.cpp:1:
In file included from slope/regularization_sequence.h:8:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from slope/losses/logistic.cpp:3:
slope/losses/../math.h:795:13: warning: unused variable 'p' [-Wunused-variable]
795 | const int p = x.cols();
| ^
In file included from slope/screening.cpp:8:
slope/math.h:795:13: warning: unused variable 'p' [-Wunused-variable]
795 | const int p = x.cols();
| ^
In file included from slope/math.cpp:1:
slope/math.h:795:13: warning: unused variable 'p' [-Wunused-variable]
795 | const int p = x.cols();
| ^
In file included from setup_model.cpp:1:
In file included from ./setup_model.h:3:
In file included from ./slope/slope.h:8:
In file included from ./slope/clusters.h:8:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
slope/clusters.cpp:206:7: warning: unused variable 'old_ptr' [-Wunused-variable]
206 | int old_ptr = pointer(old_index); // Save pointer for cluster being moved
| ^~~~~~~
slope/clusters.cpp:207:7: warning: unused variable 'new_ptr' [-Wunused-variable]
207 | int new_ptr = pointer(new_index); // Save destination pointer
| ^~~~~~~
slope/clusters.cpp:251:8: warning: unused variable 'c_size_new' [-Wunused-variable]
251 | auto c_size_new = cluster_size(new_index);
| ^~~~~~~~~~
slope/losses/multinomial.cpp:30:7: warning: unused variable 'p' [-Wunused-variable]
30 | int p = y.cols();
| ^
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/slope.cpp -o slope/slope.o
In file included from slope/regularization_sequence.cpp:2:
slope/math.h:795:13: warning: unused variable 'p' [-Wunused-variable]
795 | const int p = x.cols();
| ^
1 warning generated.
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/solvers/hybrid.cpp -o slope/solvers/hybrid.o
In file included from rcpp_cv.cpp:1:
In file included from ./setup_model.h:3:
In file included from ./slope/slope.h:15:
./slope/math.h:795:13: warning: unused variable 'p' [-Wunused-variable]
795 | const int p = x.cols();
| ^
In file included from r-exports.cpp:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
2 warnings generated.
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/solvers/hybrid_cd.cpp -o slope/solvers/hybrid_cd.o
In file included from r-exports.cpp:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from rcpp_slope.cpp:1:
In file included from ./setup_model.h:3:
In file included from ./slope/slope.h:15:
./slope/math.h:795:13: warning: unused variable 'p' [-Wunused-variable]
795 | const int p = x.cols();
| ^
In file included from RcppExports.cpp:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from RcppExports.cpp:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from RcppExports.cpp:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/solvers/pgd.cpp -o slope/solvers/pgd.o
In file included from rcpp_cv.cpp:1:
In file included from ./setup_model.h:3:
In file included from ./slope/slope.h:21:
./slope/solvers/hybrid_cd.h:349:13: warning: unused variable 'm' [-Wunused-variable]
349 | const int m = residual.cols();
| ^
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/solvers/setup_solver.cpp -o slope/solvers/setup_solver.o
In file included from slope/cv.cpp:1:
In file included from slope/cv.h:15:
In file included from slope/slope.h:15:
slope/math.h:795:13: warning: unused variable 'p' [-Wunused-variable]
795 | const int p = x.cols();
| ^
2 warnings generated.
2 warnings generated.
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/solvers/slope_threshold.cpp -o slope/solvers/slope_threshold.o
In file included from r-exports.cpp:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from rcpp_slope.cpp:1:
In file included from ./setup_model.h:3:
In file included from ./slope/slope.h:21:
./slope/solvers/hybrid_cd.h:349:13: warning: unused variable 'm' [-Wunused-variable]
349 | const int m = residual.cols();
| ^
In file included from RcppExports.cpp:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from setup_model.cpp:1:
In file included from ./setup_model.h:3:
In file included from ./slope/slope.h:15:
./slope/math.h:795:13: warning: unused variable 'p' [-Wunused-variable]
795 | const int p = x.cols();
| ^
In file included from slope/cv.cpp:1:
In file included from slope/cv.h:15:
In file included from slope/slope.h:21:
slope/solvers/hybrid_cd.h:349:13: warning: unused variable 'm' [-Wunused-variable]
349 | const int m = residual.cols();
| ^
3 warnings generated.
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/sorted_l1_norm.cpp -o slope/sorted_l1_norm.o
In file included from rcpp_cv.cpp:1:
In file included from ./setup_model.h:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
2 warnings generated.
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/timer.cpp -o slope/timer.o
In file included from rcpp_cv.cpp:1:
In file included from ./setup_model.h:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from setup_model.cpp:1:
In file included from ./setup_model.h:3:
In file included from ./slope/slope.h:21:
./slope/solvers/hybrid_cd.h:349:13: warning: unused variable 'm' [-Wunused-variable]
349 | const int m = residual.cols();
| ^
In file included from rcpp_slope.cpp:1:
In file included from ./setup_model.h:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
2 warnings generated.
In file included from rcpp_slope.cpp:1:
In file included from ./setup_model.h:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
5 warnings generated.
clang++-20 -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/bigmemory/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -I. -fopenmp -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c slope/utils.cpp -o slope/utils.o
In file included from rcpp_cv.cpp:1:
In file included from ./setup_model.h:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from rcpp_slope.cpp:1:
In file included from ./setup_model.h:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from setup_model.cpp:1:
In file included from ./setup_model.h:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from setup_model.cpp:1:
In file included from ./setup_model.h:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from setup_model.cpp:1:
In file included from ./setup_model.h:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
5 warnings generated.
2 warnings generated.
In file included from slope/slope.cpp:1:
In file included from slope/slope.h:8:
In file included from slope/clusters.h:8:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from slope/solvers/hybrid.cpp:6:
In file included from slope/solvers/hybrid.h:9:
In file included from slope/solvers/../clusters.h:8:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
3 warnings generated.
In file included from slope/solvers/hybrid_cd.cpp:1:
In file included from slope/solvers/hybrid_cd.h:9:
In file included from slope/solvers/../clusters.h:8:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from slope/solvers/hybrid.cpp:6:
In file included from slope/solvers/hybrid.h:12:
In file included from slope/solvers/hybrid_cd.h:10:
slope/solvers/../math.h:795:13: warning: unused variable 'p' [-Wunused-variable]
795 | const int p = x.cols();
| ^
In file included from slope/solvers/hybrid_cd.cpp:1:
In file included from slope/solvers/hybrid_cd.h:10:
slope/solvers/../math.h:795:13: warning: unused variable 'p' [-Wunused-variable]
795 | const int p = x.cols();
| ^
In file included from slope/solvers/setup_solver.cpp:1:
In file included from slope/solvers/hybrid.h:9:
In file included from slope/solvers/../clusters.h:8:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from slope/solvers/slope_threshold.cpp:1:
In file included from slope/solvers/slope_threshold.h:8:
In file included from slope/solvers/../clusters.h:8:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from slope/solvers/hybrid.cpp:6:
In file included from slope/solvers/hybrid.h:12:
slope/solvers/hybrid_cd.h:349:13: warning: unused variable 'm' [-Wunused-variable]
349 | const int m = residual.cols();
| ^
In file included from slope/solvers/pgd.cpp:6:
In file included from slope/solvers/pgd.h:9:
In file included from slope/solvers/../math.h:8:
In file included from slope/solvers/../clusters.h:8:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
5 warnings generated.
In file included from slope/solvers/hybrid_cd.cpp:1:
slope/solvers/hybrid_cd.h:349:13: warning: unused variable 'm' [-Wunused-variable]
349 | const int m = residual.cols();
| ^
In file included from slope/slope.cpp:1:
In file included from slope/slope.h:15:
slope/math.h:795:13: warning: unused variable 'p' [-Wunused-variable]
795 | const int p = x.cols();
| ^
3 warnings generated.
In file included from slope/solvers/slope_threshold.cpp:2:
slope/solvers/../math.h:795:13: warning: unused variable 'p' [-Wunused-variable]
795 | const int p = x.cols();
| ^
In file included from slope/solvers/pgd.cpp:6:
In file included from slope/solvers/pgd.h:9:
slope/solvers/../math.h:795:13: warning: unused variable 'p' [-Wunused-variable]
795 | const int p = x.cols();
| ^
In file included from slope/solvers/setup_solver.cpp:1:
In file included from slope/solvers/hybrid.h:12:
In file included from slope/solvers/hybrid_cd.h:10:
slope/solvers/../math.h:795:13: warning: unused variable 'p' [-Wunused-variable]
795 | const int p = x.cols();
| ^
2 warnings generated.
In file included from slope/sorted_l1_norm.cpp:3:
In file included from slope/math.h:8:
In file included from slope/clusters.h:8:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from slope/slope.cpp:1:
In file included from slope/slope.h:21:
slope/solvers/hybrid_cd.h:349:13: warning: unused variable 'm' [-Wunused-variable]
349 | const int m = residual.cols();
| ^
In file included from slope/solvers/setup_solver.cpp:1:
In file included from slope/solvers/hybrid.h:12:
slope/solvers/hybrid_cd.h:349:13: warning: unused variable 'm' [-Wunused-variable]
349 | const int m = residual.cols();
| ^
In file included from slope/sorted_l1_norm.cpp:3:
slope/math.h:795:13: warning: unused variable 'p' [-Wunused-variable]
795 | const int p = x.cols();
| ^
In file included from slope/utils.cpp:1:
In file included from slope/utils.h:9:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
1 warning generated.
7 warnings generated.
3 warnings generated.
In file included from slope/solvers/hybrid.cpp:6:
slope/solvers/hybrid.h:245:10: warning: private field 'pgd_learning_rate' is not used [-Wunused-private-field]
245 | double pgd_learning_rate =
| ^
slope/solvers/hybrid.h:247:10: warning: private field 'pgd_learning_rate_decr' is not used [-Wunused-private-field]
247 | double pgd_learning_rate_decr =
| ^
3 warnings generated.
2 warnings generated.
2 warnings generated.
5 warnings generated.
7 warnings generated.
7 warnings generated.
clang++-20 -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang20/lib -L/usr/local/clang20/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -L/usr/local/clang20/lib/clang/20/lib/x86_64-unknown-linux-gnu -o SLOPE.so RcppExports.o r-exports.o rcpp_cv.o rcpp_slope.o setup_model.o slope/clusters.o slope/cv.o slope/folds.o slope/kkt_check.o slope/logger.o slope/losses/loss.o slope/losses/logistic.o slope/losses/multinomial.o slope/losses/poisson.o slope/losses/quadratic.o slope/losses/setup_loss.o slope/math.o slope/normalize.o slope/qnorm.o slope/regularization_sequence.o slope/score.o slope/screening.o slope/slope.o slope/solvers/hybrid.o slope/solvers/hybrid_cd.o slope/solvers/pgd.o slope/solvers/setup_solver.o slope/solvers/slope_threshold.o slope/sorted_l1_norm.o slope/timer.o slope/utils.o -fopenmp
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/SLOPE/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/SLOPE/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/SLOPE/src'
installing to /data/gannet/ripley/R/packages/tests-clang/SLOPE.Rcheck/00LOCK-SLOPE/00new/SLOPE/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SLOPE)