* installing *source* package ‘Ryacas’ ... ** package ‘Ryacas’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘clang version 18.1.2’ using C++14 make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/Ryacas/src' /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/anumber.cpp -o yacas/src/anumber.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/arggetter.cpp -o yacas/src/arggetter.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/associationclass.cpp -o yacas/src/associationclass.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/deffile.cpp -o yacas/src/deffile.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/errors.cpp -o yacas/src/errors.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/infixparser.cpp -o yacas/src/infixparser.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/lispatom.cpp -o yacas/src/lispatom.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/lispenvironment.cpp -o yacas/src/lispenvironment.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/lisperror.cpp -o yacas/src/lisperror.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/lispeval.cpp -o yacas/src/lispeval.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/lispevalhash.cpp -o yacas/src/lispevalhash.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/lisphash.cpp -o yacas/src/lisphash.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/lispio.cpp -o yacas/src/lispio.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/lispobject.cpp -o yacas/src/lispobject.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/lispparser.cpp -o yacas/src/lispparser.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/lispuserfunc.cpp -o yacas/src/lispuserfunc.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/mathcommands2.cpp -o yacas/src/mathcommands2.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/mathcommands3.cpp -o yacas/src/mathcommands3.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/mathcommands.cpp -o yacas/src/mathcommands.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/mathuserfunc.cpp -o yacas/src/mathuserfunc.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/mempool.cpp -o yacas/src/mempool.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/nn.cpp -o yacas/src/nn.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/numbers.cpp -o yacas/src/numbers.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/patcher.cpp -o yacas/src/patcher.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/patternclass.cpp -o yacas/src/patternclass.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/patterns.cpp -o yacas/src/patterns.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/platmath.cpp -o yacas/src/platmath.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/standard.cpp -o yacas/src/standard.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/stdfileio.cpp -o yacas/src/stdfileio.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/stringio.cpp -o yacas/src/stringio.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/substitute.cpp -o yacas/src/substitute.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/tokenizer.cpp -o yacas/src/tokenizer.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/xmltokenizer.cpp -o yacas/src/xmltokenizer.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/yacasapi.cpp -o yacas/src/yacasapi.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/yacasnumbers.cpp -o yacas/src/yacasnumbers.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c yacas/src/zz.cpp -o yacas/src/zz.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c RcppExports.cpp -o RcppExports.o /usr/local/clang18/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -Iyacas/include -DNO_GLOBALS -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c ryacas.cpp -o ryacas.o /usr/local/clang18/bin/clang++ -std=gnu++14 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o Ryacas.so yacas/src/anumber.o yacas/src/arggetter.o yacas/src/associationclass.o yacas/src/deffile.o yacas/src/errors.o yacas/src/infixparser.o yacas/src/lispatom.o yacas/src/lispenvironment.o yacas/src/lisperror.o yacas/src/lispeval.o yacas/src/lispevalhash.o yacas/src/lisphash.o yacas/src/lispio.o yacas/src/lispobject.o yacas/src/lispparser.o yacas/src/lispuserfunc.o yacas/src/mathcommands2.o yacas/src/mathcommands3.o yacas/src/mathcommands.o yacas/src/mathuserfunc.o yacas/src/mempool.o yacas/src/nn.o yacas/src/numbers.o yacas/src/patcher.o yacas/src/patternclass.o yacas/src/patterns.o yacas/src/platmath.o yacas/src/standard.o yacas/src/stdfileio.o yacas/src/stringio.o yacas/src/substitute.o yacas/src/tokenizer.o yacas/src/xmltokenizer.o yacas/src/yacasapi.o yacas/src/yacasnumbers.o yacas/src/zz.o RcppExports.o ryacas.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/Ryacas/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/Ryacas/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/Ryacas/src' installing to /data/gannet/ripley/R/packages/tests-clang/Ryacas.Rcheck/00LOCK-Ryacas/00new/Ryacas/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Ryacas)