* installing *source* package ‘RobustAFT’ ...
** this is package ‘RobustAFT’ version ‘1.4-7’
** package ‘RobustAFT’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 22.1.1 (https://github.com/llvm/llvm-project fef02d48c08db859ef83f84232ed78bd9d1c323a)’
using Fortran compiler: ‘flang version 22.1.1 (https://github.com/llvm/llvm-project fef02d48c08db859ef83f84232ed78bd9d1c323a)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RobustAFT/src'
clang-22 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang22/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c init.c -o init.o
flang-22  -fpic  -O2 -pedantic  -c robaft.f -o robaft.o
./robaft.f:518:29: warning: Value of uninitialized local variable 'valz' is used but never defined [-Wused-undefined-variable]
        REAL DFV(66),VALS(66),VALZ(66)
                              ^^^^
./robaft.f:651:12: warning: Value of uninitialized local variable 'xlspi' is used but never defined [-Wused-undefined-variable]
        DATA XLSPI,YLSPI/0.572364942925,0.564189583548/
             ^^^^^
./robaft.f:651:18: warning: Value of uninitialized local variable 'ylspi' is used but never defined [-Wused-undefined-variable]
        DATA XLSPI,YLSPI/0.572364942925,0.564189583548/
                   ^^^^^
./robaft.f:717:30: warning: Value of uninitialized local variable 'sqr1d2' is used but never defined [-Wused-undefined-variable]
        REAL               P,X,SQR1D2
                               ^^^^^^
./robaft.f:931:12: warning: Value of uninitialized local variable 'tl' is used but never defined [-Wused-undefined-variable]
        DATA TL/1.E-10/
             ^^
./robaft.f:1112:17: warning: Value of uninitialized local variable 'nrepq' is used but never defined [-Wused-undefined-variable]
        DIMENSION NREPQ(8),NREPE(5)
                  ^^^^^
./robaft.f:1112:26: warning: Value of uninitialized local variable 'nrepe' is used but never defined [-Wused-undefined-variable]
        DIMENSION NREPQ(8),NREPE(5)
                           ^^^^^
./robaft.f:1605:12: warning: Value of uninitialized local variable 'spi' is used but never defined [-Wused-undefined-variable]
        DATA SPI/2.506628274631/
             ^^^
./robaft.f:2266:12: warning: Value of uninitialized local variable 'ncall' is used but never defined [-Wused-undefined-variable]
        DATA NCALL,FX1/0,0.0/
             ^^^^^
./robaft.f:2304:12: warning: Value of uninitialized local variable 'ncall' is used but never defined [-Wused-undefined-variable]
        DATA NCALL,FX1/0,0.0/
             ^^^^^
./robaft.f:2332:12: warning: Value of uninitialized local variable 'ncall' is used but never defined [-Wused-undefined-variable]
        DATA NCALL,FX1/0,0.0/
             ^^^^^
./robaft.f:2518:12: warning: Value of uninitialized local variable 'tl' is used but never defined [-Wused-undefined-variable]
        DATA TL/1.E-10/
             ^^
./robaft.f:3518:12: warning: Value of uninitialized local variable 'tl' is used but never defined [-Wused-undefined-variable]
        DATA TL/1.E-10/
             ^^
./robaft.f:3812:45: warning: Value of uninitialized local variable 'medf0' is used but never defined [-Wused-undefined-variable]
        REAL BETA(MDB,NP),FMEDMAD(NB,2),YY(N),MEDF0(3),MADF0(3)
                                              ^^^^^
./robaft.f:3812:54: warning: Value of uninitialized local variable 'madf0' is used but never defined [-Wused-undefined-variable]
        REAL BETA(MDB,NP),FMEDMAD(NB,2),YY(N),MEDF0(3),MADF0(3)
                                                       ^^^^^
./robaft.f:4191:12: warning: Value of uninitialized local variable 'tl' is used but never defined [-Wused-undefined-variable]
        DATA TL/0.0001/
             ^^
./robaft.f:4813:46: warning: Value of uninitialized local variable 'tl' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION F,A,B,X,Y,FA,FB,FN,XN,TL,TOL
                                               ^^
./robaft.f:4865:26: warning: Value of uninitialized local variable 'spi' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION X,SPI,X2,XEXPD
                           ^^^
./robaft.f:4875:26: warning: Value of uninitialized local variable 'spi' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION X,SPI,X2,XEXPD
                           ^^^
./robaft.f:4885:28: warning: Value of uninitialized local variable 'sqr1d2' is used but never defined [-Wused-undefined-variable]
        REAL               X,SQR1D2
                             ^^^^^^
./robaft.f:4904:26: warning: Value of uninitialized local variable 'p' is used but never defined [-Wused-undefined-variable]
        REAL               P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                           ^
./robaft.f:4904:28: warning: Value of uninitialized local variable 'q' is used but never defined [-Wused-undefined-variable]
        REAL               P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                             ^
./robaft.f:4904:30: warning: Value of uninitialized local variable 'p1' is used but never defined [-Wused-undefined-variable]
        REAL               P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                               ^^
./robaft.f:4904:33: warning: Value of uninitialized local variable 'q1' is used but never defined [-Wused-undefined-variable]
        REAL               P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                                  ^^
./robaft.f:4904:36: warning: Value of uninitialized local variable 'p2' is used but never defined [-Wused-undefined-variable]
        REAL               P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                                     ^^
./robaft.f:4904:39: warning: Value of uninitialized local variable 'q2' is used but never defined [-Wused-undefined-variable]
        REAL               P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                                        ^^
./robaft.f:4904:42: warning: Value of uninitialized local variable 'xmin' is used but never defined [-Wused-undefined-variable]
        REAL               P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                                           ^^^^
./robaft.f:4904:47: warning: Value of uninitialized local variable 'xlarge' is used but never defined [-Wused-undefined-variable]
        REAL               P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                                                ^^^^^^
./robaft.f:4904:54: warning: Value of uninitialized local variable 'sqrpi' is used but never defined [-Wused-undefined-variable]
        REAL               P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                                                       ^^^^^
./robaft.f:4905:47: warning: Value of uninitialized local variable 'xbig' is used but never defined [-Wused-undefined-variable]
       *                   RES,XSQ,XNUM,XDEN,XI,XBIG
                                                ^^^^
./robaft.f:5003:42: warning: Value of uninitialized local variable 'zup' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION TAU,V,LOWER,UPPER,ZUP,ZLOW
                                           ^^^
./robaft.f:5003:46: warning: Value of uninitialized local variable 'zlow' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION TAU,V,LOWER,UPPER,ZUP,ZLOW
                                               ^^^^
./robaft.f:5027:63: warning: Value of uninitialized local variable 'tol' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION X,PN(6),P,G,GP,GIN,OFLO,FACTOR,RN,TERM,TOL,
                                                                ^^^
./robaft.f:6367:12: warning: Value of uninitialized local variable 'ncall' is used but never defined [-Wused-undefined-variable]
        DATA NCALL,FX1/0,0.0/
             ^^^^^
./robaft.f:6429:26: warning: Value of uninitialized local variable 'dgmax' is used but never defined [-Wused-undefined-variable]
       +       TILD,ERRSTD,DGMAX(2),WORK,F0GMBL,DGUMBL
                           ^^^^^
./robaft.f:6930:30: warning: Value of uninitialized local variable 'sqr1d2' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION   P,X,SQR1D2,CD
                               ^^^^^^
./robaft.f:6953:26: warning: Value of uninitialized local variable 'p' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION   P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                           ^
./robaft.f:6953:28: warning: Value of uninitialized local variable 'q' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION   P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                             ^
./robaft.f:6953:30: warning: Value of uninitialized local variable 'p1' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION   P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                               ^^
./robaft.f:6953:33: warning: Value of uninitialized local variable 'q1' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION   P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                                  ^^
./robaft.f:6953:36: warning: Value of uninitialized local variable 'p2' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION   P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                                     ^^
./robaft.f:6953:39: warning: Value of uninitialized local variable 'q2' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION   P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                                        ^^
./robaft.f:6953:42: warning: Value of uninitialized local variable 'xmin' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION   P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                                           ^^^^
./robaft.f:6953:47: warning: Value of uninitialized local variable 'xlarge' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION   P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                                                ^^^^^^
./robaft.f:6953:54: warning: Value of uninitialized local variable 'sqrpi' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION   P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                                                       ^^^^^
./robaft.f:6954:47: warning: Value of uninitialized local variable 'xbig' is used but never defined [-Wused-undefined-variable]
       *                   RES,XSQ,XNUM,XDEN,XI,XBIG
                                                ^^^^
./robaft.f:7098:12: warning: Value of uninitialized local variable 'radix' is used but never defined [-Wused-undefined-variable]
        DATA RADIX,PREC,EXMIN,XLGMN,YLGMN,XBIG,EPMACH
             ^^^^^
./robaft.f:7098:18: warning: Value of uninitialized local variable 'prec' is used but never defined [-Wused-undefined-variable]
        DATA RADIX,PREC,EXMIN,XLGMN,YLGMN,XBIG,EPMACH
                   ^^^^
./robaft.f:7098:23: warning: Value of uninitialized local variable 'exmin' is used but never defined [-Wused-undefined-variable]
        DATA RADIX,PREC,EXMIN,XLGMN,YLGMN,XBIG,EPMACH
                        ^^^^^
./robaft.f:7098:29: warning: Value of uninitialized local variable 'xlgmn' is used but never defined [-Wused-undefined-variable]
        DATA RADIX,PREC,EXMIN,XLGMN,YLGMN,XBIG,EPMACH
                              ^^^^^
./robaft.f:7098:35: warning: Value of uninitialized local variable 'ylgmn' is used but never defined [-Wused-undefined-variable]
        DATA RADIX,PREC,EXMIN,XLGMN,YLGMN,XBIG,EPMACH
                                    ^^^^^
./robaft.f:7098:41: warning: Value of uninitialized local variable 'xbig' is used but never defined [-Wused-undefined-variable]
        DATA RADIX,PREC,EXMIN,XLGMN,YLGMN,XBIG,EPMACH
                                          ^^^^
./robaft.f:7098:46: warning: Value of uninitialized local variable 'epmach' is used but never defined [-Wused-undefined-variable]
        DATA RADIX,PREC,EXMIN,XLGMN,YLGMN,XBIG,EPMACH
                                               ^^^^^^
./robaft.f:7141:27: warning: Value of uninitialized local variable 'radix' is used but never defined [-Wused-undefined-variable]
         DOUBLE PRECISION X,RADIX,PREC,EXMIN,XLGMN,YLGMN,XBIG,EPMACH
                            ^^^^^
./robaft.f:7141:33: warning: Value of uninitialized local variable 'prec' is used but never defined [-Wused-undefined-variable]
         DOUBLE PRECISION X,RADIX,PREC,EXMIN,XLGMN,YLGMN,XBIG,EPMACH
                                  ^^^^
./robaft.f:7141:38: warning: Value of uninitialized local variable 'exmin' is used but never defined [-Wused-undefined-variable]
         DOUBLE PRECISION X,RADIX,PREC,EXMIN,XLGMN,YLGMN,XBIG,EPMACH
                                       ^^^^^
./robaft.f:7141:44: warning: Value of uninitialized local variable 'xlgmn' is used but never defined [-Wused-undefined-variable]
         DOUBLE PRECISION X,RADIX,PREC,EXMIN,XLGMN,YLGMN,XBIG,EPMACH
                                             ^^^^^
./robaft.f:7141:50: warning: Value of uninitialized local variable 'ylgmn' is used but never defined [-Wused-undefined-variable]
         DOUBLE PRECISION X,RADIX,PREC,EXMIN,XLGMN,YLGMN,XBIG,EPMACH
                                                   ^^^^^
./robaft.f:7141:56: warning: Value of uninitialized local variable 'xbig' is used but never defined [-Wused-undefined-variable]
         DOUBLE PRECISION X,RADIX,PREC,EXMIN,XLGMN,YLGMN,XBIG,EPMACH
                                                         ^^^^
./robaft.f:7141:61: warning: Value of uninitialized local variable 'epmach' is used but never defined [-Wused-undefined-variable]
         DOUBLE PRECISION X,RADIX,PREC,EXMIN,XLGMN,YLGMN,XBIG,EPMACH
                                                              ^^^^^^
./robaft.f:7742:38: warning: Value of uninitialized local variable 'wg' is used but never defined [-Wused-undefined-variable]
       *  RESG,RESK,RESKH,RESULT,UFLOW,WG,WGK,XGK,FEXT
                                       ^^
./robaft.f:7742:41: warning: Value of uninitialized local variable 'wgk' is used but never defined [-Wused-undefined-variable]
       *  RESG,RESK,RESKH,RESULT,UFLOW,WG,WGK,XGK,FEXT
                                          ^^^
./robaft.f:7742:45: warning: Value of uninitialized local variable 'xgk' is used but never defined [-Wused-undefined-variable]
       *  RESG,RESK,RESKH,RESULT,UFLOW,WG,WGK,XGK,FEXT
                                              ^^^
flang-22  -fpic  -O2 -pedantic  -c tmlest.f -o tmlest.o
./tmlest.f:19:26: warning: Value of uninitialized local variable 'radix' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION X,RADIX,PREC,EXMIN,XLGMN,YLGMN,XBIG,EPMACH
                           ^^^^^
./tmlest.f:19:32: warning: Value of uninitialized local variable 'prec' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION X,RADIX,PREC,EXMIN,XLGMN,YLGMN,XBIG,EPMACH
                                 ^^^^
./tmlest.f:19:37: warning: Value of uninitialized local variable 'exmin' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION X,RADIX,PREC,EXMIN,XLGMN,YLGMN,XBIG,EPMACH
                                      ^^^^^
./tmlest.f:19:43: warning: Value of uninitialized local variable 'xlgmn' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION X,RADIX,PREC,EXMIN,XLGMN,YLGMN,XBIG,EPMACH
                                            ^^^^^
./tmlest.f:19:49: warning: Value of uninitialized local variable 'ylgmn' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION X,RADIX,PREC,EXMIN,XLGMN,YLGMN,XBIG,EPMACH
                                                  ^^^^^
./tmlest.f:19:55: warning: Value of uninitialized local variable 'xbig' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION X,RADIX,PREC,EXMIN,XLGMN,YLGMN,XBIG,EPMACH
                                                        ^^^^
./tmlest.f:19:60: warning: Value of uninitialized local variable 'epmach' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION X,RADIX,PREC,EXMIN,XLGMN,YLGMN,XBIG,EPMACH
                                                             ^^^^^^
./tmlest.f:336:38: warning: Value of uninitialized local variable 'wg' is used but never defined [-Wused-undefined-variable]
       *  RESG,RESK,RESKH,RESULT,UFLOW,WG,WGK,XGK,FEXT
                                       ^^
./tmlest.f:336:41: warning: Value of uninitialized local variable 'wgk' is used but never defined [-Wused-undefined-variable]
       *  RESG,RESK,RESKH,RESULT,UFLOW,WG,WGK,XGK,FEXT
                                          ^^^
./tmlest.f:336:45: warning: Value of uninitialized local variable 'xgk' is used but never defined [-Wused-undefined-variable]
       *  RESG,RESK,RESKH,RESULT,UFLOW,WG,WGK,XGK,FEXT
                                              ^^^
./tmlest.f:537:12: warning: Value of uninitialized local variable 'spi' is used but never defined [-Wused-undefined-variable]
        DATA SPI/2.506628274631D0/
             ^^^
./tmlest.f:556:30: warning: Value of uninitialized local variable 'sqr1d2' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION   P,X,SQR1D2,CD
                               ^^^^^^
./tmlest.f:579:26: warning: Value of uninitialized local variable 'p' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION   P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                           ^
./tmlest.f:579:28: warning: Value of uninitialized local variable 'q' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION   P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                             ^
./tmlest.f:579:30: warning: Value of uninitialized local variable 'p1' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION   P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                               ^^
./tmlest.f:579:33: warning: Value of uninitialized local variable 'q1' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION   P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                                  ^^
./tmlest.f:579:36: warning: Value of uninitialized local variable 'p2' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION   P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                                     ^^
./tmlest.f:579:39: warning: Value of uninitialized local variable 'q2' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION   P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                                        ^^
./tmlest.f:579:42: warning: Value of uninitialized local variable 'xmin' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION   P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                                           ^^^^
./tmlest.f:579:47: warning: Value of uninitialized local variable 'xlarge' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION   P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                                                ^^^^^^
./tmlest.f:579:54: warning: Value of uninitialized local variable 'sqrpi' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION   P,Q,P1,Q1,P2,Q2,XMIN,XLARGE,SQRPI,XX,
                                                       ^^^^^
./tmlest.f:580:47: warning: Value of uninitialized local variable 'xbig' is used but never defined [-Wused-undefined-variable]
       *                   RES,XSQ,XNUM,XDEN,XI,XBIG
                                                ^^^^
./tmlest.f:693:28: warning: Value of uninitialized local variable 'spi' is used but never defined [-Wused-undefined-variable]
        DOUBLE PRECISION TMP,SPI,X2,X,EXMIN
                             ^^^
clang-22 -std=gnu23 -shared -L/usr/local/clang/lib64 -L/usr/local/clang22/lib -L/usr/local/clang22/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -L/usr/local/clang21/lib/clang/22/lib/x86_64-unknown-linux-gnu -o RobustAFT.so init.o robaft.o tmlest.o -lflang_rt.runtime -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RobustAFT/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RobustAFT/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RobustAFT/src'
installing to /data/gannet/ripley/R/packages/tests-clang/RobustAFT.Rcheck/00LOCK-RobustAFT/00new/RobustAFT/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (RobustAFT)