* installing *source* package ‘RoBSA’ ... ** package ‘RoBSA’ successfully unpacked and MD5 sums checked ** using staged installation checking for pkg-config... /usr/bin/pkg-config configure: Setting compile and link flags according to pkg-config configure: Compile flags are -I/usr/local/clang/include/JAGS configure: Link flags are -L/usr/local/clang/lib64 -ljags -ljrmath checking for gcc... /usr/local/clang18/bin/clang checking whether we are using the GNU C compiler... no checking whether /usr/local/clang18/bin/clang accepts -g... no checking for /usr/local/clang18/bin/clang option to accept ISO C89... unsupported checking for jags_version in -ljags... yes checking version of JAGS library... OK configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘clang version 18.1.4’ using C++ compiler: ‘clang version 18.1.4’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RoBSA/src' /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/clang/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c functions/exp.cc -o functions/exp.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/clang/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c functions/gamma.cc -o functions/gamma.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/clang/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c functions/llogis.cc -o functions/llogis.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/clang/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c functions/lnorm.cc -o functions/lnorm.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/clang/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c functions/weibull.cc -o functions/weibull.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/clang/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c distributions/EXP.cc -o distributions/EXP.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/clang/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c distributions/GAMMA.cc -o distributions/GAMMA.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/clang/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c distributions/LLOGIS.cc -o distributions/LLOGIS.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/clang/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c distributions/LNORM.cc -o distributions/LNORM.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/clang/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c distributions/WEIBULL.cc -o distributions/WEIBULL.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/clang/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c source/distributions.cc -o source/distributions.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/clang/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c init.c -o init.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/clang/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c RoBSA.cc -o RoBSA.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/local/clang/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c testRoBSA.cc -o testRoBSA.o /usr/local/clang18/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o RoBSA.so functions/exp.o functions/gamma.o functions/llogis.o functions/lnorm.o functions/weibull.o distributions/EXP.o distributions/GAMMA.o distributions/LLOGIS.o distributions/LNORM.o distributions/WEIBULL.o source/distributions.o init.o RoBSA.o testRoBSA.o -L/usr/local/clang/lib64 -ljags -ljrmath -ljrmath make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RoBSA/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RoBSA/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RoBSA/src' installing to /data/gannet/ripley/R/packages/tests-clang/RoBSA.Rcheck/00LOCK-RoBSA/00new/RoBSA/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RoBSA)