* installing *source* package ‘RcppStreams’ ...
** package ‘RcppStreams’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 18.1.2’
using C++11
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RcppStreams/src'
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c RcppExports.cpp -o RcppExports.o
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c common.cpp -o common.o
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c hello.cpp -o hello.o
In file included from common.cpp:52:
In file included from ../inst/include/streamulus.h:30:
In file included from ../inst/include/engine.h:24:
In file included from ../inst/include/graph.h:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/scoped_ptr.hpp:13:
/data/gannet/ripley/R/test-clang/BH/include/boost/smart_ptr/scoped_ptr.hpp:75:31: warning: 'auto_ptr<boost::no_property>' is deprecated [-Wdeprecated-declarations]
75 | explicit scoped_ptr( std::auto_ptr<T> p ) BOOST_SP_NOEXCEPT : px( p.release() )
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:408:18: note: in instantiation of template class 'boost::scoped_ptr<boost::no_property>' requested here
408 | property_ptr m_property;
| ^
../inst/include/graph.h:46:26: note: in instantiation of template class 'boost::adjacency_list<boost::vecS, boost::vecS, boost::bidirectionalS, boost::property<streamulus::StropTag, boost::shared_ptr<streamulus::StropBase>>, boost::property<streamulus::StreamTag, boost::shared_ptr<streamulus::StreamBase>>>' requested here
46 | class Graph : public BoostGraph
| ^
/usr/local/clang18/bin/../include/c++/v1/__memory/auto_ptr.h:29:28: note: 'auto_ptr<boost::no_property>' has been explicitly marked deprecated here
29 | class _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 auto_ptr {
| ^
/usr/local/clang18/bin/../include/c++/v1/__config:989:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
989 | # define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
| ^
/usr/local/clang18/bin/../include/c++/v1/__config:974:49: note: expanded from macro '_LIBCPP_DEPRECATED'
974 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from hello.cpp:47:
In file included from ../inst/include/streamulus.h:30:
In file included from ../inst/include/engine.h:24:
In file included from ../inst/include/graph.h:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/scoped_ptr.hpp:13:
/data/gannet/ripley/R/test-clang/BH/include/boost/smart_ptr/scoped_ptr.hpp:75:31: warning: 'auto_ptr<boost::no_property>' is deprecated [-Wdeprecated-declarations]
75 | explicit scoped_ptr( std::auto_ptr<T> p ) BOOST_SP_NOEXCEPT : px( p.release() )
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:408:18: note: in instantiation of template class 'boost::scoped_ptr<boost::no_property>' requested here
408 | property_ptr m_property;
| ^
../inst/include/graph.h:46:26: note: in instantiation of template class 'boost::adjacency_list<boost::vecS, boost::vecS, boost::bidirectionalS, boost::property<streamulus::StropTag, boost::shared_ptr<streamulus::StropBase>>, boost::property<streamulus::StreamTag, boost::shared_ptr<streamulus::StreamBase>>>' requested here
46 | class Graph : public BoostGraph
| ^
/usr/local/clang18/bin/../include/c++/v1/__memory/auto_ptr.h:29:28: note: 'auto_ptr<boost::no_property>' has been explicitly marked deprecated here
29 | class _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 auto_ptr {
| ^
/usr/local/clang18/bin/../include/c++/v1/__config:989:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
989 | # define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
| ^
/usr/local/clang18/bin/../include/c++/v1/__config:974:49: note: expanded from macro '_LIBCPP_DEPRECATED'
974 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
1 warning generated.
1 warning generated.
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c movavg.cpp -o movavg.o
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c sliding.cpp -o sliding.o
In file included from movavg.cpp:28:
In file included from ../inst/include/streamulus.h:30:
In file included from ../inst/include/engine.h:24:
In file included from ../inst/include/graph.h:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/scoped_ptr.hpp:13:
/data/gannet/ripley/R/test-clang/BH/include/boost/smart_ptr/scoped_ptr.hpp:75:31: warning: 'auto_ptr<boost::no_property>' is deprecated [-Wdeprecated-declarations]
75 | explicit scoped_ptr( std::auto_ptr<T> p ) BOOST_SP_NOEXCEPT : px( p.release() )
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:408:18: note: in instantiation of template class 'boost::scoped_ptr<boost::no_property>' requested here
408 | property_ptr m_property;
| ^
../inst/include/graph.h:46:26: note: in instantiation of template class 'boost::adjacency_list<boost::vecS, boost::vecS, boost::bidirectionalS, boost::property<streamulus::StropTag, boost::shared_ptr<streamulus::StropBase>>, boost::property<streamulus::StreamTag, boost::shared_ptr<streamulus::StreamBase>>>' requested here
46 | class Graph : public BoostGraph
| ^
/usr/local/clang18/bin/../include/c++/v1/__memory/auto_ptr.h:29:28: note: 'auto_ptr<boost::no_property>' has been explicitly marked deprecated here
29 | class _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 auto_ptr {
| ^
/usr/local/clang18/bin/../include/c++/v1/__config:989:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
989 | # define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
| ^
/usr/local/clang18/bin/../include/c++/v1/__config:974:49: note: expanded from macro '_LIBCPP_DEPRECATED'
974 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
In file included from sliding.cpp:27:
In file included from ../inst/include/streamulus.h:30:
In file included from ../inst/include/engine.h:24:
In file included from ../inst/include/graph.h:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/scoped_ptr.hpp:13:
/data/gannet/ripley/R/test-clang/BH/include/boost/smart_ptr/scoped_ptr.hpp:75:31: warning: 'auto_ptr<boost::no_property>' is deprecated [-Wdeprecated-declarations]
75 | explicit scoped_ptr( std::auto_ptr<T> p ) BOOST_SP_NOEXCEPT : px( p.release() )
| ^
/data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:408:18: note: in instantiation of template class 'boost::scoped_ptr<boost::no_property>' requested here
408 | property_ptr m_property;
| ^
../inst/include/graph.h:46:26: note: in instantiation of template class 'boost::adjacency_list<boost::vecS, boost::vecS, boost::bidirectionalS, boost::property<streamulus::StropTag, boost::shared_ptr<streamulus::StropBase>>, boost::property<streamulus::StreamTag, boost::shared_ptr<streamulus::StreamBase>>>' requested here
46 | class Graph : public BoostGraph
| ^
/usr/local/clang18/bin/../include/c++/v1/__memory/auto_ptr.h:29:28: note: 'auto_ptr<boost::no_property>' has been explicitly marked deprecated here
29 | class _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 auto_ptr {
| ^
/usr/local/clang18/bin/../include/c++/v1/__config:989:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
989 | # define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
| ^
/usr/local/clang18/bin/../include/c++/v1/__config:974:49: note: expanded from macro '_LIBCPP_DEPRECATED'
974 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__))
| ^
1 warning generated.
1 warning generated.
/usr/local/clang18/bin/clang++ -std=gnu++11 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o RcppStreams.so RcppExports.o common.o hello.o movavg.o sliding.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RcppStreams/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RcppStreams/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RcppStreams/src'
installing to /data/gannet/ripley/R/packages/tests-clang/RcppStreams.Rcheck/00LOCK-RcppStreams/00new/RcppStreams/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (RcppStreams)