• using R Under development (unstable) (2025-12-18 r89199)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     clang version 21.1.8     flang version 21.1.8
• running under: Fedora Linux 42 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘RcppGreedySetCover/DESCRIPTION’ ... OK
• this is package ‘RcppGreedySetCover’ version ‘0.1.1’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘RcppGreedySetCover’ can be installed ... [25s/31s] OK See the install log for details.
• used C++ compiler: ‘clang version 21.1.8’
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking examples ... ERROR Running examples in ‘RcppGreedySetCover-Ex.R’ failed The error most likely occurred in: > ### Name: greedySetCover > ### Title: Greedy Set Cover > ### Aliases: greedySetCover > ### Keywords: cover greedy set > > ### ** Examples > > # Create some data. > set.seed(333) > X <- data.table::rbindlist( + lapply( + seq_len(1e4L), + function(x) list(element=sample.int(n=1e3L,size=sample.int(50L,1L))) + ), + idcol="set" + ) > # Elements are integers 1,2,...,1000. > > # Run set cover > res <- greedySetCover(X,FALSE) Error in `[.data.table`(X, , `:=`("i0", .GRP - 1L), by = n1) :   attempt access index 2/2 in VECTOR_ELT Calls: greedySetCover -> [ -> [.data.table Execution halted
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... ERROR   Running ‘testthat.R’ Running the tests in ‘tests/testthat.R’ failed. Complete output:   > library(testthat)   > library(RcppGreedySetCover)   >   > test_check("RcppGreedySetCover")   Saving _problems/test-greedySetCover-8.R   Saving _problems/test-greedySetCover-28.R   [ FAIL 2 | WARN 0 | SKIP 0 | PASS 1 ]      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Error ('test-greedySetCover.R:8:5'): greedySetCover returns expected coverage ──   Error in ``[.data.table`(X, , `:=`("i0", .GRP - 1L), by = n1)`: attempt access index 2/2 in VECTOR_ELT   Backtrace:       ▆    1. └─RcppGreedySetCover::greedySetCover(df, data.table = FALSE) at test-greedySetCover.R:8:5    2. ├─X[, `:=`("i0", .GRP - 1L), by = n1]    3. └─data.table:::`[.data.table`(X, , `:=`("i0", .GRP - 1L), by = n1)   ── Error ('test-greedySetCover.R:28:5'): greedySetCover computes a valid cover when several sets are required ──   Error in ``[.data.table`(X, , `:=`("i0", .GRP - 1L), by = n1)`: attempt access index 2/2 in VECTOR_ELT   Backtrace:       ▆    1. └─RcppGreedySetCover::greedySetCover(df) at test-greedySetCover.R:28:5    2. ├─X[, `:=`("i0", .GRP - 1L), by = n1]    3. └─data.table:::`[.data.table`(X, , `:=`("i0", .GRP - 1L), by = n1)      [ FAIL 2 | WARN 0 | SKIP 0 | PASS 1 ]   Error:   ! Test failures.   Execution halted
• checking PDF version of manual ... OK
• checking HTML version of manual ... OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 2 ERRORs