• using R Under development (unstable) (2025-09-09 r88801)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     clang version 21.1.0     flang version 21.1.0
• running under: Fedora Linux 42 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘RPANDA/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘RPANDA’ version ‘2.4’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... INFO Imports includes 26 non-default packages. Importing from so many packages makes the package vulnerable to any of them becoming unavailable. Move as many as possible to Suggests and use conditionally.
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘RPANDA’ can be installed ... [169s/465s] WARNING Found the following significant warnings:   Note: possible error in 'plotweb(as.matrix(link), ': unused arguments (col.low = col.P, col.high = col.H, col.interaction = "lightgray") See the install log for details. Information on the location(s) of code generating the ‘Note’s can be obtained by re-running with environment variable R_KEEP_PKG_SOURCE set to ‘yes’.
• used C compiler: ‘clang version 21.1.0’
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [31s/83s] OK
• checking whether the package can be loaded with stated dependencies ... [30s/84s] OK
• checking whether the package can be unloaded cleanly ... [30s/80s] OK
• checking whether the namespace can be loaded with stated dependencies ... [28s/59s] OK
• checking whether the namespace can be unloaded cleanly ... [29s/75s] OK
• checking loading without being on the library search path ... [29s/74s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [283s/457s] NOTE plot_network: possible error in plotweb(as.matrix(link), col.low =   col.P, col.high = col.H, col.interaction = "lightgray", empty =   TRUE): unused arguments (col.low = col.P, col.high = col.H,   col.interaction = "lightgray")
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [30s/56s] OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking examples ... [49s/126s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [31s/67s] OK   Running ‘test-all.R’ [30s/66s]
• checking PDF version of manual ... [20s/42s] OK
• checking HTML version of manual ... [13s/25s] OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 1 WARNING, 1 NOTE