* installing *source* package ‘OptOR’ ...
** this is package ‘OptOR’ version ‘0.1.0’
** package ‘OptOR’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 23.1.1’
make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-clang/OptOR/src'
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c CR_memory_conversions.c -o CR_memory_conversions.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c array.c -o array.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c calc_X.c -o calc_X.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c calc_X_wrapperR.c -o calc_X_wrapperR.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c calc_inv.c -o calc_inv.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c classify_grid.c -o classify_grid.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c constraint.c -o constraint.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c cont_hr.c -o cont_hr.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c cont_hr_expansion.c -o cont_hr_expansion.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c cont_submatrix.c -o cont_submatrix.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c debug.c -o debug.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c find_best_corner.c -o find_best_corner.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c find_extrema.c -o find_extrema.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c find_extrema_wrapperR.c -o find_extrema_wrapperR.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c find_forced_coordinates.c -o find_forced_coordinates.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c find_max.c -o find_max.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c get_counting_matrix.c -o get_counting_matrix.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c get_optimal_rectangle.c -o get_optimal_rectangle.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c grid_cont_conversion.c -o grid_cont_conversion.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c grid_hr.c -o grid_hr.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c grid_matrix.c -o grid_matrix.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c init.c -o init.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c largest_rect_under_hist.c -o largest_rect_under_hist.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c linear_algebra.c -o linear_algebra.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c logging.c -o logging.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c optimal_cont_hr.c -o optimal_cont_hr.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c optimal_cont_hr_wrapperR.c -o optimal_cont_hr_wrapperR.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c optimal_grid_hr.c -o optimal_grid_hr.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c optimal_grid_hr_wrapperR.c -o optimal_grid_hr_wrapperR.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c qf_grid_decision.c -o qf_grid_decision.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c qf_max_result.c -o qf_max_result.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c qf_precomp_build.c -o qf_precomp_build.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c qf_precomp_free.c -o qf_precomp_free.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c qf_precomp_init.c -o qf_precomp_init.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c quadratic_forms.c -o quadratic_forms.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c rectangle.c -o rectangle.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c schur.c -o schur.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c set_corner.c -o set_corner.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -DOPTOR_WITH_R   -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c slice.c -o slice.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -shared -L/usr/local/clang/lib64 -L/usr/local/clang23/lib -L/usr/local/clang23/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -o OptOR.so CR_memory_conversions.o array.o calc_X.o calc_X_wrapperR.o calc_inv.o classify_grid.o constraint.o cont_hr.o cont_hr_expansion.o cont_submatrix.o debug.o find_best_corner.o find_extrema.o find_extrema_wrapperR.o find_forced_coordinates.o find_max.o get_counting_matrix.o get_optimal_rectangle.o grid_cont_conversion.o grid_hr.o grid_matrix.o init.o largest_rect_under_hist.o linear_algebra.o logging.o optimal_cont_hr.o optimal_cont_hr_wrapperR.o optimal_grid_hr.o optimal_grid_hr_wrapperR.o qf_grid_decision.o qf_max_result.o qf_precomp_build.o qf_precomp_free.o qf_precomp_init.o quadratic_forms.o rectangle.o schur.o set_corner.o slice.o -fopenmp
make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-clang/OptOR/src'
make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-clang/OptOR/src'
make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-clang/OptOR/src'
installing to /data/localhost/ripley/R/packages/tests-clang/OptOR.Rcheck/00LOCK-OptOR/00new/OptOR/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (OptOR)