* installing *source* package ‘MultiBD’ ...
** package ‘MultiBD’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 18.1.4’
using C++11
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/MultiBD/src'
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c BidBj_Cpp.cpp -o BidBj_Cpp.o
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c RcppExports.cpp -o RcppExports.o
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c SIR_Cpp.cpp -o SIR_Cpp.o
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c bb_lt_Cpp.cpp -o bb_lt_Cpp.o
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c bb_lt_invert_Cpp.cpp -o bb_lt_invert_Cpp.o
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c bbd_lt_Cpp.cpp -o bbd_lt_Cpp.o
bb_lt_invert_Cpp.cpp:80:10: warning: moving a local object in a return statement prevents copy elision [-Wpessimizing-move]
80 | return(std::move(res));
| ^
bb_lt_invert_Cpp.cpp:80:10: note: remove std::move call here
80 | return(std::move(res));
| ^~~~~~~~~~ ~
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c bbd_lt_invert_Cpp.cpp -o bbd_lt_invert_Cpp.o
In file included from bb_lt_invert_Cpp.cpp:1:
./bbd.h:246:33: warning: lambda capture 'end' is not used [-Wunused-lambda-capture]
246 | workers.run([begin, end, start, chunkSize, function]() {
| ^
bb_lt_invert_Cpp.cpp:31:10: note: in instantiation of function template specialization 'loops::TbbThreads::for_each<boost::iterators::counting_iterator<int>, (lambda at bb_lt_invert_Cpp.cpp:32:5)>' requested here
31 | scheme.for_each( boost::make_counting_iterator(0), boost::make_counting_iterator(kmax),
| ^
bb_lt_invert_Cpp.cpp:94:16: note: in instantiation of function template specialization 'bb_lt_invert_Cpp_impl<loops::TbbThreads>' requested here
94 | return bb_lt_invert_Cpp_impl(t, lambda1, lambda2, Ap1, Bp1, direction,
| ^
In file included from bb_lt_invert_Cpp.cpp:1:
./bbd.h:246:33: warning: lambda capture 'end' is not used [-Wunused-lambda-capture]
246 | workers.run([begin, end, start, chunkSize, function]() {
| ^
bb_lt_invert_Cpp.cpp:61:18: note: in instantiation of function template specialization 'loops::TbbThreads::for_each<boost::iterators::counting_iterator<int>, (lambda at bb_lt_invert_Cpp.cpp:62:13)>' requested here
61 | scheme.for_each( boost::make_counting_iterator(0), boost::make_counting_iterator(nblocks),
| ^
bb_lt_invert_Cpp.cpp:94:16: note: in instantiation of function template specialization 'bb_lt_invert_Cpp_impl<loops::TbbThreads>' requested here
94 | return bb_lt_invert_Cpp_impl(t, lambda1, lambda2, Ap1, Bp1, direction,
| ^
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c inv_Bk1dBk_Cpp.cpp -o inv_Bk1dBk_Cpp.o
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c lentz_plus_invBk1dBk_Cpp.cpp -o lentz_plus_invBk1dBk_Cpp.o
3 warnings generated.
bbd_lt_invert_Cpp.cpp:107:10: warning: moving a local object in a return statement prevents copy elision [-Wpessimizing-move]
107 | return(std::move(res));
| ^
bbd_lt_invert_Cpp.cpp:107:10: note: remove std::move call here
107 | return(std::move(res));
| ^~~~~~~~~~ ~
In file included from bbd_lt_invert_Cpp.cpp:1:
./bbd.h:246:33: warning: lambda capture 'end' is not used [-Wunused-lambda-capture]
246 | workers.run([begin, end, start, chunkSize, function]() {
| ^
bbd_lt_invert_Cpp.cpp:51:10: note: in instantiation of function template specialization 'loops::TbbThreads::for_each<boost::iterators::counting_iterator<int>, (lambda at bbd_lt_invert_Cpp.cpp:52:5)>' requested here
51 | scheme.for_each( boost::make_counting_iterator(0), boost::make_counting_iterator(kmax),
| ^
bbd_lt_invert_Cpp.cpp:122:16: note: in instantiation of function template specialization 'bbd_lt_invert_Cpp_impl<loops::TbbThreads>' requested here
122 | return bbd_lt_invert_Cpp_impl(t, a0, b0, lambda1, lambda2, mu2, gamma, x, y, A, Bp1,
| ^
In file included from bbd_lt_invert_Cpp.cpp:1:
./bbd.h:246:33: warning: lambda capture 'end' is not used [-Wunused-lambda-capture]
246 | workers.run([begin, end, start, chunkSize, function]() {
| ^
bbd_lt_invert_Cpp.cpp:85:18: note: in instantiation of function template specialization 'loops::TbbThreads::for_each<boost::iterators::counting_iterator<int>, (lambda at bbd_lt_invert_Cpp.cpp:86:13)>' requested here
85 | scheme.for_each( boost::make_counting_iterator(0), boost::make_counting_iterator(nblocks),
| ^
bbd_lt_invert_Cpp.cpp:122:16: note: in instantiation of function template specialization 'bbd_lt_invert_Cpp_impl<loops::TbbThreads>' requested here
122 | return bbd_lt_invert_Cpp_impl(t, a0, b0, lambda1, lambda2, mu2, gamma, x, y, A, Bp1,
| ^
3 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c phi_Cpp.cpp -o phi_Cpp.o
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c prod_lambda2_Cpp.cpp -o prod_lambda2_Cpp.o
prod_lambda2_Cpp.cpp:21:10: warning: moving a local object in a return statement prevents copy elision [-Wpessimizing-move]
21 | return(std::move(res));
| ^
prod_lambda2_Cpp.cpp:21:10: note: remove std::move call here
21 | return(std::move(res));
| ^~~~~~~~~~ ~
1 warning generated.
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c prod_mu2_Cpp.cpp -o prod_mu2_Cpp.o
prod_mu2_Cpp.cpp:21:10: warning: moving a local object in a return statement prevents copy elision [-Wpessimizing-move]
21 | return(std::move(res));
| ^
prod_mu2_Cpp.cpp:21:10: note: remove std::move call here
21 | return(std::move(res));
| ^~~~~~~~~~ ~
1 warning generated.
/usr/local/clang18/bin/clang++ -std=gnu++11 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o MultiBD.so BidBj_Cpp.o RcppExports.o SIR_Cpp.o bb_lt_Cpp.o bb_lt_invert_Cpp.o bbd_lt_Cpp.o bbd_lt_invert_Cpp.o inv_Bk1dBk_Cpp.o lentz_plus_invBk1dBk_Cpp.o phi_Cpp.o prod_lambda2_Cpp.o prod_mu2_Cpp.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/MultiBD/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/MultiBD/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/MultiBD/src'
installing to /data/gannet/ripley/R/packages/tests-clang/MultiBD.Rcheck/00LOCK-MultiBD/00new/MultiBD/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (MultiBD)