* installing *source* package ‘MMGFM’ ...
** this is package ‘MMGFM’ version ‘1.2.0’
** package ‘MMGFM’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 21.1.4’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/MMGFM/src'
/usr/local/clang21/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang21/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c RcppExports.cpp -o RcppExports.o
/usr/local/clang21/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang21/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c mmcgfm.cpp -o mmcgfm.o
mmcgfm.cpp:64:10: warning: unused variable 'j' [-Wunused-variable]
64 | int s, j, ns, id, im, pm, q = Mf(0).n_cols, d = Xf.n_cols, c=Xf.n_rows, S = Xf.n_slices;
| ^
mmcgfm.cpp:122:26: warning: variable 'qs' set but not used [-Wunused-but-set-variable]
122 | int s, ns, id, im, pm, qs, d = Xf.n_cols, c=Xf.n_rows, S = Xf.n_slices;
| ^
mmcgfm.cpp:146:22: warning: variable 'ns' set but not used [-Wunused-but-set-variable]
146 | int s, id, im, pm, ns, d = Xf.n_cols, c=Xf.n_rows, S = Xf.n_slices;
| ^
mmcgfm.cpp:169:18: warning: unused variable 'pm' [-Wunused-variable]
169 | int s, id, im, pm, ns, d = wf.n_cols, c=wf.n_rows, S = wf.n_slices;
| ^~
mmcgfm.cpp:240:26: warning: unused variable 'qs' [-Wunused-variable]
240 | int s, ns, id, im, pm, qs, d = Xf.n_cols, c=Xf.n_rows, S = Xf.n_slices;
| ^~
mmcgfm.cpp:388:12: warning: unused variable 'elbo11' [-Wunused-variable]
388 | double elbo11 = ELBOfun( Xf, typeID, tauf, Zf, betaf, Af, Bf, invLambdaf, sigma2, Muf_y, Sf_y, Mf, Sigma, Of, Phi, wf, zeta);
| ^~~~~~
6 warnings generated.
/usr/local/clang21/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang21/lib -L/usr/local/clang21/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -L/usr/local/clang21/lib/clang/21/lib/x86_64-unknown-linux-gnu -o MMGFM.so RcppExports.o mmcgfm.o -fopenmp -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lflang_rt.runtime -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/MMGFM/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/MMGFM/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/MMGFM/src'
installing to /data/gannet/ripley/R/packages/tests-clang/MMGFM.Rcheck/00LOCK-MMGFM/00new/MMGFM/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (MMGFM)