- using R Under development (unstable) (2025-07-06 r88390)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
clang version 20.1.7
flang version 20.1.7
- running under: Fedora Linux 42 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘LTFGRS/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘LTFGRS’ version ‘1.0.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘LTFGRS’ can be installed ... [42s/35s] OK
See the install log for details.
- used C++ compiler: ‘clang version 20.1.7’
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [37s/38s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [62s/63s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [14s/14s] ERROR
Running ‘testthat.R’ [13s/14s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(LTFGRS)
> library(Rcpp)
>
> test_check("LTFGRS")
seed: 4487
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 131 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-Gibbs-sampler.R:22:3'): Gibbs sampler works ──────────────────
cov(test) (`actual`) not equal to cov(true) (`expected`).
actual vs expected
[,1] [,2]
- actual[1, ] 0.30235791 0.01766974
+ expected[1, ] 0.29789358 0.01897766
- actual[2, ] 0.01766974 0.14965152
+ expected[2, ] 0.01897766 0.14994476
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 131 ]
Error: Test failures
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [23s/23s] OK
- checking PDF version of manual ... [10s/10s] OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 ERROR