* installing *source* package ‘Immigrate’ ...
** package ‘Immigrate’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/Immigrate/src'
clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I"/data/gannet/ripley/R/test-clang/Rcpp/include" -isystem /usr/local/clang/include  -fpic  -g -O3 -Wall -pedantic -frtti  -c BIMCpp.cpp -o BIMCpp.o
clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I"/data/gannet/ripley/R/test-clang/Rcpp/include" -isystem /usr/local/clang/include  -fpic  -g -O3 -Wall -pedantic -frtti  -c BIMMACpp.cpp -o BIMMACpp.o
clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I"/data/gannet/ripley/R/test-clang/Rcpp/include" -isystem /usr/local/clang/include  -fpic  -g -O3 -Wall -pedantic -frtti  -c IM4ECpp.cpp -o IM4ECpp.o
IM4ECpp.cpp:24:54: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
    List res = oneIM4E(train_xx,train_yy,w_before,sig=sig,lambda=lambda);
                                                  ~~~^~~~
IM4ECpp.cpp:24:65: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
    List res = oneIM4E(train_xx,train_yy,w_before,sig=sig,lambda=lambda);
                                                          ~~~~~~^~~~~~~
IM4ECpp.cpp:33:54: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
    List res = oneIM4E(train_xx,train_yy,w_before,sig=sig,lambda=lambda);
                                                  ~~~^~~~
IM4ECpp.cpp:33:65: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
    List res = oneIM4E(train_xx,train_yy,w_before,sig=sig,lambda=lambda);
                                                          ~~~~~~^~~~~~~
clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I"/data/gannet/ripley/R/test-clang/Rcpp/include" -isystem /usr/local/clang/include  -fpic  -g -O3 -Wall -pedantic -frtti  -c ImmigrateCpp.cpp -o ImmigrateCpp.o
4 warnings generated.
clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I"/data/gannet/ripley/R/test-clang/Rcpp/include" -isystem /usr/local/clang/include  -fpic  -g -O3 -Wall -pedantic -frtti  -c ImmigrateSampleCpp.cpp -o ImmigrateSampleCpp.o
clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I"/data/gannet/ripley/R/test-clang/Rcpp/include" -isystem /usr/local/clang/include  -fpic  -g -O3 -Wall -pedantic -frtti  -c RcppExports.cpp -o RcppExports.o
clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I"/data/gannet/ripley/R/test-clang/Rcpp/include" -isystem /usr/local/clang/include  -fpic  -g -O3 -Wall -pedantic -frtti  -c imIM4ECpp.cpp -o imIM4ECpp.o
ImmigrateCpp.cpp:22:62: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
       List res = oneImmigrate(train_xx,train_yy,w_before,sig=sig);
                                                          ~~~^~~~
ImmigrateCpp.cpp:32:62: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
       List res = oneImmigrate(train_xx,train_yy,w_before,sig=sig);
                                                          ~~~^~~~
2 warnings generated.
imIM4ECpp.cpp:24:59: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
       List res = oneimIM4E(train_xx,train_yy,w_before,sig=sig,rho=rho,lambda=lambda);
                                                       ~~~^~~~
imIM4ECpp.cpp:24:67: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
       List res = oneimIM4E(train_xx,train_yy,w_before,sig=sig,rho=rho,lambda=lambda);
                                                               ~~~^~~~
imIM4ECpp.cpp:24:78: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
       List res = oneimIM4E(train_xx,train_yy,w_before,sig=sig,rho=rho,lambda=lambda);
                                                                       ~~~~~~^~~~~~~
imIM4ECpp.cpp:33:59: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
       List res = oneimIM4E(train_xx,train_yy,w_before,sig=sig,rho=rho,lambda=lambda);
                                                       ~~~^~~~
imIM4ECpp.cpp:33:67: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
       List res = oneimIM4E(train_xx,train_yy,w_before,sig=sig,rho=rho,lambda=lambda);
                                                               ~~~^~~~
imIM4ECpp.cpp:33:78: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
       List res = oneimIM4E(train_xx,train_yy,w_before,sig=sig,rho=rho,lambda=lambda);
                                                                       ~~~~~~^~~~~~~
6 warnings generated.
clang++ -std=gnu++11 -shared -L/usr/local/clang/lib64 -L/usr/local/lib64 -o Immigrate.so BIMCpp.o BIMMACpp.o IM4ECpp.o ImmigrateCpp.o ImmigrateSampleCpp.o RcppExports.o imIM4ECpp.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/Immigrate/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/Immigrate/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/Immigrate/src'
installing to /data/gannet/ripley/R/packages/tests-clang/Immigrate.Rcheck/00LOCK-Immigrate/00new/Immigrate/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Immigrate)