- using R Under development (unstable) (2025-11-13 r89017)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
clang version 21.1.5
flang version 21.1.5
- running under: Fedora Linux 42 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘HurreconR/DESCRIPTION’ ... OK
- this is package ‘HurreconR’ version ‘1.1’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘HurreconR’ can be installed ... [8s/18s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [21s/52s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... ERROR
Running ‘testthat.R’
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(HurreconR)
>
> test_check("HurreconR")
Path set to /data/gannet/ripley/R/packages/tests-clang/HurreconR.Rcheck/HurreconR/
... Modeling site ...
062 ms
Saving _problems/test_HurreconR-15.R
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 0 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_HurreconR.R:14:1'): (code run outside of `test_that()`) ────────
Error in `expect_snapshot_value(hurrecon_summarize_site(hur_id = "AL1935-03", site_name = "Miami FL", hur_path = hur_path), test.expected, style = "serialize", cran = FALSE)`: `tolerance` must be a number, not the string "/data/gannet/ripley/R/packa...".
Backtrace:
▆
1. └─testthat::expect_snapshot_value(tolerance = test.expected) at test_HurreconR.R:14:1
2. └─testthat:::check_number_decimal(tolerance, min = 0)
3. └─testthat:::.stop_not_number(...)
4. └─testthat:::stop_input_type(...)
5. └─rlang::abort(message, ..., call = call, arg = arg)
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 0 ]
Error:
! Test failures.
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... OK
- checking PDF version of manual ... [7s/15s] OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 ERROR