* installing *source* package ‘EpiInvert’ ...
** package ‘EpiInvert’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 18.1.4’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/EpiInvert/src'
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c EpiIndicators.cpp -o EpiIndicators.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c EpiIndicators_main.cpp -o EpiIndicators_main.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c EpiInvertCore_q_variable.cpp -o EpiInvertCore_q_variable.o
EpiInvertCore_q_variable.cpp:1101:19: warning: variable 'iter_alternate_optimization' is used uninitialized whenever 'for' loop exits because its condition is false [-Wsometimes-uninitialized]
 1101 |       for(int k=0;k<(int) i.size();k++){
      |                   ^~~~~~~~~~~~~~~~
EpiInvertCore_q_variable.cpp:1112:37: note: uninitialized use occurs here
 1112 |     iter_alternate_optimizationV[m]=iter_alternate_optimization;
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~
EpiInvertCore_q_variable.cpp:1101:19: note: remove the condition if it is always true
 1101 |       for(int k=0;k<(int) i.size();k++){
      |                   ^~~~~~~~~~~~~~~~
EpiInvertCore_q_variable.cpp:1074:36: note: initialize the variable 'iter_alternate_optimization' to silence this warning
 1074 |     int iter_alternate_optimization;
      |                                    ^
      |                                     = 0
EpiInvertCore_q_variable.cpp:1528:19: warning: variable 'iter_alternate_optimization' is used uninitialized whenever 'for' loop exits because its condition is false [-Wsometimes-uninitialized]
 1528 |       for(int k=0;k<(int) i.size();k++){
      |                   ^~~~~~~~~~~~~~~~
EpiInvertCore_q_variable.cpp:1539:37: note: uninitialized use occurs here
 1539 |     iter_alternate_optimizationV[m]=iter_alternate_optimization;
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~
EpiInvertCore_q_variable.cpp:1528:19: note: remove the condition if it is always true
 1528 |       for(int k=0;k<(int) i.size();k++){
      |                   ^~~~~~~~~~~~~~~~
EpiInvertCore_q_variable.cpp:1499:36: note: initialize the variable 'iter_alternate_optimization' to silence this warning
 1499 |     int iter_alternate_optimization;
      |                                    ^
      |                                     = 0
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c EpiInvert_main.cpp -o EpiInvert_main.o
2 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c RcppExports.cpp -o RcppExports.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c utilities.cpp -o utilities.o
utilities.cpp:33:10: warning: variable 'suma' set but not used [-Wunused-but-set-variable]
   33 |   double suma=K[0];
      |          ^
1 warning generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o EpiInvert.so EpiIndicators.o EpiIndicators_main.o EpiInvertCore_q_variable.o EpiInvert_main.o RcppExports.o utilities.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/EpiInvert/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/EpiInvert/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/EpiInvert/src'
installing to /data/gannet/ripley/R/packages/tests-clang/EpiInvert.Rcheck/00LOCK-EpiInvert/00new/EpiInvert/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (EpiInvert)