* installing *source* package ‘EMMIXgene’ ...
** package ‘EMMIXgene’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/EMMIXgene/src'
clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang/include   -fpic  -g -O3 -Wall -pedantic -frtti  -c RcppExports.cpp -o RcppExports.o
clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang/include   -fpic  -g -O3 -Wall -pedantic -frtti  -c emmix.cpp -o emmix.o
clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include/ -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang/include   -fpic  -g -O3 -Wall -pedantic -frtti  -c tkmeans.cpp -o tkmeans.o
emmix.cpp:351:195: warning: expression result unused [-Wunused-value]
              Q2(i) = -std::log(boost::math::tgamma(0.5*(nu.at(i)))) +0.5*nu.at(i) *std::log(0.5*nu.at(i)) - 0.5*nu.at(i)*(boost::math::digamma(0.5*(nu.at(i)+1.0))-std::log (0.5*(nu.at(i)+1.0)) + arma::sum(arma::log(you.row(i))-you.row(i)),1);
                                                                                                                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1 warning generated.
clang++ -std=gnu++11 -shared -L/usr/local/clang/lib64 -L/usr/local/lib64 -o EMMIXgene.so RcppExports.o emmix.o tkmeans.o -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/EMMIXgene/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/EMMIXgene/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/EMMIXgene/src'
installing to /data/gannet/ripley/R/packages/tests-clang/EMMIXgene.Rcheck/00LOCK-EMMIXgene/00new/EMMIXgene/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (EMMIXgene)