* installing *source* package ‘Compack’ ...
** package ‘Compack’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 17.0.5’
using C++11
make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/Compack/src'
/usr/local/clang17/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang17/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c RcppExports.cpp -o RcppExports.o
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/Compack.h:7:
In file included from ./../inst/include/Compack_RcppExports.h:7:
In file included from /data/gannet/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:25:
In file included from /data/gannet/ripley/R/test-clang/Rcpp/include/RcppCommon.h:128:
In file included from /data/gannet/ripley/R/test-clang/Rcpp/include/Rcpp/routines.h:26:
/data/gannet/ripley/R/test-clang/Rcpp/include/Rcpp/iostream/Rstreambuf.h:53:20: warning: field precision should have type 'int', but argument has type 'std::streamsize' (aka 'long') [-Wformat]
53 | Rprintf("%.*s", num, s);
| ~~^~ ~~~
/data/gannet/ripley/R/test-clang/Rcpp/include/Rcpp/iostream/Rstreambuf.h:57:21: warning: field precision should have type 'int', but argument has type 'std::streamsize' (aka 'long') [-Wformat]
57 | REprintf("%.*s", num, s);
| ~~^~ ~~~
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/Compack.h:7:
In file included from ./../inst/include/Compack_RcppExports.h:7:
In file included from /data/gannet/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:25:
In file included from /data/gannet/ripley/R/test-clang/Rcpp/include/RcppCommon.h:181:
/data/gannet/ripley/R/test-clang/Rcpp/include/Rcpp/print.h:30:26: warning: format string is not a string literal (potentially insecure) [-Wformat-security]
30 | Rf_warningcall(call, s.c_str());
| ^~~~~~~~~
/data/gannet/ripley/R/test-clang/Rcpp/include/Rcpp/print.h:30:26: note: treat the string as an argument to avoid this
30 | Rf_warningcall(call, s.c_str());
| ^
| "%s",
RcppExports.cpp:59:18: warning: format string is not a string literal (potentially insecure) [-Wformat-security]
59 | Rf_error(CHAR(rcpp_msgSEXP_gen));
| ^~~~~~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/R-clang/include/Rinternals.h:198:17: note: expanded from macro 'CHAR'
198 | #define CHAR(x) R_CHAR(x)
| ^~~~~~~~~
RcppExports.cpp:59:18: note: treat the string as an argument to avoid this
59 | Rf_error(CHAR(rcpp_msgSEXP_gen));
| ^
| "%s",
/data/gannet/ripley/R/R-clang/include/Rinternals.h:198:17: note: expanded from macro 'CHAR'
198 | #define CHAR(x) R_CHAR(x)
| ^
RcppExports.cpp:110:18: warning: format string is not a string literal (potentially insecure) [-Wformat-security]
110 | Rf_error(CHAR(rcpp_msgSEXP_gen));
| ^~~~~~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/R-clang/include/Rinternals.h:198:17: note: expanded from macro 'CHAR'
198 | #define CHAR(x) R_CHAR(x)
| ^~~~~~~~~
RcppExports.cpp:110:18: note: treat the string as an argument to avoid this
110 | Rf_error(CHAR(rcpp_msgSEXP_gen));
| ^
| "%s",
/data/gannet/ripley/R/R-clang/include/Rinternals.h:198:17: note: expanded from macro 'CHAR'
198 | #define CHAR(x) R_CHAR(x)
| ^
RcppExports.cpp:159:18: warning: format string is not a string literal (potentially insecure) [-Wformat-security]
159 | Rf_error(CHAR(rcpp_msgSEXP_gen));
| ^~~~~~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/R-clang/include/Rinternals.h:198:17: note: expanded from macro 'CHAR'
198 | #define CHAR(x) R_CHAR(x)
| ^~~~~~~~~
RcppExports.cpp:159:18: note: treat the string as an argument to avoid this
159 | Rf_error(CHAR(rcpp_msgSEXP_gen));
| ^
| "%s",
/data/gannet/ripley/R/R-clang/include/Rinternals.h:198:17: note: expanded from macro 'CHAR'
198 | #define CHAR(x) R_CHAR(x)
| ^
6 warnings generated.
/usr/local/clang17/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang17/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c constraints.cpp -o constraints.o
In file included from constraints.cpp:2:
In file included from /data/gannet/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:25:
In file included from /data/gannet/ripley/R/test-clang/Rcpp/include/RcppCommon.h:128:
In file included from /data/gannet/ripley/R/test-clang/Rcpp/include/Rcpp/routines.h:26:
/data/gannet/ripley/R/test-clang/Rcpp/include/Rcpp/iostream/Rstreambuf.h:53:20: warning: field precision should have type 'int', but argument has type 'std::streamsize' (aka 'long') [-Wformat]
53 | Rprintf("%.*s", num, s);
| ~~^~ ~~~
/data/gannet/ripley/R/test-clang/Rcpp/include/Rcpp/iostream/Rstreambuf.h:57:21: warning: field precision should have type 'int', but argument has type 'std::streamsize' (aka 'long') [-Wformat]
57 | REprintf("%.*s", num, s);
| ~~^~ ~~~
In file included from constraints.cpp:2:
In file included from /data/gannet/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:25:
In file included from /data/gannet/ripley/R/test-clang/Rcpp/include/RcppCommon.h:181:
/data/gannet/ripley/R/test-clang/Rcpp/include/Rcpp/print.h:30:26: warning: format string is not a string literal (potentially insecure) [-Wformat-security]
30 | Rf_warningcall(call, s.c_str());
| ^~~~~~~~~
/data/gannet/ripley/R/test-clang/Rcpp/include/Rcpp/print.h:30:26: note: treat the string as an argument to avoid this
30 | Rf_warningcall(call, s.c_str());
| ^
| "%s",
3 warnings generated.
/usr/local/clang17/bin/clang++ -std=gnu++11 -shared -L/usr/local/clang/lib64 -L/usr/local/clang17/lib -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o Compack.so RcppExports.o constraints.o -fopenmp -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lFortran_main -lFortranRuntime -lFortranDecimal -lm
make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/Compack/src'
make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/Compack/src'
make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/Compack/src'
installing to /data/gannet/ripley/R/packages/tests-clang/Compack.Rcheck/00LOCK-Compack/00new/Compack/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Compack)