• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 18:45:14 UTC
• checking for file ‘widals/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘widals’ version ‘0.6.2’
• checking CRAN incoming feasibility ... [1s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘widals’ can be installed ... OK See the install log for details.
• used C compiler: ‘gcc-16 (Debian 16.1.0-3) 16.1.0’
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [5s/6s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [1s/2s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [11s/105s] OK
• checking PDF version of manual ... [5s/7s] OK
• checking HTML version of manual ... [2s/2s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0BrvqK’ ‘~/tmp/scratch/Rtmp0J1h0d’   ‘~/tmp/scratch/Rtmp0hHr6B’ ‘~/tmp/scratch/Rtmp16fQWT’   ‘~/tmp/scratch/Rtmp1HmatE’ ‘~/tmp/scratch/Rtmp1VGm9B’   ‘~/tmp/scratch/Rtmp1hoHbJ’ ‘~/tmp/scratch/Rtmp2bVtYz’   ‘~/tmp/scratch/Rtmp3CMpP0’ ‘~/tmp/scratch/Rtmp5x9LXx’   ‘~/tmp/scratch/Rtmp6C7LCC’ ‘~/tmp/scratch/Rtmp6HCINt’   ‘~/tmp/scratch/Rtmp6JBqB0’ ‘~/tmp/scratch/Rtmp6Z4TvQ’   ‘~/tmp/scratch/Rtmp7OmCnQ’ ‘~/tmp/scratch/Rtmp7VTyWZ’   ‘~/tmp/scratch/Rtmp7df8Ak’ ‘~/tmp/scratch/Rtmp82nRG2’   ‘~/tmp/scratch/Rtmp86JFMp’ ‘~/tmp/scratch/Rtmp8hNmhp’   ‘~/tmp/scratch/Rtmp8iul5m’ ‘~/tmp/scratch/Rtmp9oMzgJ’   ‘~/tmp/scratch/RtmpA5mhdf’ ‘~/tmp/scratch/RtmpA8E4D9’   ‘~/tmp/scratch/RtmpAFQZVf’ ‘~/tmp/scratch/RtmpB19py7’   ‘~/tmp/scratch/RtmpCU2Xol’ ‘~/tmp/scratch/RtmpCh8u3n’   ‘~/tmp/scratch/RtmpD6YZYX’ ‘~/tmp/scratch/RtmpDMa0eZ’   ‘~/tmp/scratch/RtmpEgELHR’ ‘~/tmp/scratch/RtmpFCKXMZ’   ‘~/tmp/scratch/RtmpFIxpus’ ‘~/tmp/scratch/RtmpFZRSbz’   ‘~/tmp/scratch/RtmpFhAOqm’ ‘~/tmp/scratch/RtmpFqwPAP’   ‘~/tmp/scratch/RtmpGAxmWf’ ‘~/tmp/scratch/RtmpGYVzoR’   ‘~/tmp/scratch/RtmpGr14Xq’ ‘~/tmp/scratch/RtmpH14R4r’   ‘~/tmp/scratch/RtmpHD5MFt’ ‘~/tmp/scratch/RtmpHQmtbx’   ‘~/tmp/scratch/RtmpI0C0DD’ ‘~/tmp/scratch/RtmpJ5y5MA’   ‘~/tmp/scratch/RtmpJRyQb7’ ‘~/tmp/scratch/RtmpJirink’   ‘~/tmp/scratch/RtmpJvwUvA’ ‘~/tmp/scratch/RtmpKIlc4Z’   ‘~/tmp/scratch/RtmpKY18AE’ ‘~/tmp/scratch/RtmpKo8Pnh’   ‘~/tmp/scratch/RtmpKwbIan’ ‘~/tmp/scratch/RtmpMTkL3Q’   ‘~/tmp/scratch/RtmpN7IGfL’ ‘~/tmp/scratch/RtmpNIW306’   ‘~/tmp/scratch/RtmpNNaL9k’ ‘~/tmp/scratch/RtmpNycDhY’   ‘~/tmp/scratch/RtmpObFj3R’ ‘~/tmp/scratch/RtmpOglEC3’   ‘~/tmp/scratch/RtmpOiM0L1’ ‘~/tmp/scratch/RtmpPCUztr’   ‘~/tmp/scratch/RtmpPPH1nK’ ‘~/tmp/scratch/RtmpPWVZ7k’   ‘~/tmp/scratch/RtmpPYUUY4’ ‘~/tmp/scratch/RtmpQ4BEGt’   ‘~/tmp/scratch/RtmpQ93NnP’ ‘~/tmp/scratch/RtmpQeJn3d’   ‘~/tmp/scratch/RtmpQx05Fh’ ‘~/tmp/scratch/RtmpR1wXNj’   ‘~/tmp/scratch/RtmpRQs8Gw’ ‘~/tmp/scratch/RtmpSHAFNn’   ‘~/tmp/scratch/RtmpSa6d9L’ ‘~/tmp/scratch/RtmpT9cVSi’   ‘~/tmp/scratch/RtmpTHcgyt’ ‘~/tmp/scratch/RtmpTrhwln’   ‘~/tmp/scratch/RtmpU6FftL’ ‘~/tmp/scratch/RtmpUoErLu’   ‘~/tmp/scratch/RtmpV7HG5B’ ‘~/tmp/scratch/RtmpVC7dqL’   ‘~/tmp/scratch/RtmpVLSGIU’ ‘~/tmp/scratch/RtmpVo0xmV’   ‘~/tmp/scratch/RtmpWLBz89’ ‘~/tmp/scratch/RtmpXD3B5X’   ‘~/tmp/scratch/RtmpYA1JrH’ ‘~/tmp/scratch/RtmpYKYqqg’   ‘~/tmp/scratch/RtmpYj52vw’ ‘~/tmp/scratch/RtmpYnlY6v’   ‘~/tmp/scratch/RtmpZIhI6G’ ‘~/tmp/scratch/RtmpZy8CPp’   ‘~/tmp/scratch/RtmpabKlXF’ ‘~/tmp/scratch/Rtmpb3f08U’   ‘~/tmp/scratch/RtmpbJzSwc’ ‘~/tmp/scratch/RtmpblXYGi’   ‘~/tmp/scratch/Rtmpc3DhUf’ ‘~/tmp/scratch/RtmpcjZEEM’   ‘~/tmp/scratch/RtmpctjSDE’ ‘~/tmp/scratch/RtmpdJeNkV’   ‘~/tmp/scratch/RtmpeIdg4E’ ‘~/tmp/scratch/RtmpeUGAnf’   ‘~/tmp/scratch/RtmpeZ9FZ7’ ‘~/tmp/scratch/Rtmpewcgyi’   ‘~/tmp/scratch/RtmpeyoP5O’ ‘~/tmp/scratch/RtmpfAt80p’   ‘~/tmp/scratch/RtmpgBhWKn’ ‘~/tmp/scratch/RtmpgHaKfK’   ‘~/tmp/scratch/RtmpgOsCm5’ ‘~/tmp/scratch/RtmpgXwwD0’   ‘~/tmp/scratch/RtmpgmQDtY’ ‘~/tmp/scratch/Rtmph7XZV5’   ‘~/tmp/scratch/RtmphR24Qt’ ‘~/tmp/scratch/Rtmpi6U82t’   ‘~/tmp/scratch/RtmpiHlj7a’ ‘~/tmp/scratch/RtmpiHxtY5’   ‘~/tmp/scratch/RtmpiJsEC1’ ‘~/tmp/scratch/RtmpiQV5Tz’   ‘~/tmp/scratch/RtmpihSCsl’ ‘~/tmp/scratch/RtmpingZHD’   ‘~/tmp/scratch/RtmpjKwEFY’ ‘~/tmp/scratch/RtmpjMVsZn’   ‘~/tmp/scratch/RtmpjQaOk9’ ‘~/tmp/scratch/RtmpkRoFCR’   ‘~/tmp/scratch/Rtmpl0GDBB’ ‘~/tmp/scratch/RtmplRaup5’   ‘~/tmp/scratch/Rtmpldfgzj’ ‘~/tmp/scratch/RtmpljkKwW’   ‘~/tmp/scratch/RtmplolWhD’ ‘~/tmp/scratch/RtmpmSqWw6’   ‘~/tmp/scratch/RtmpmuYtos’ ‘~/tmp/scratch/RtmpnsP6kn’   ‘~/tmp/scratch/RtmpnzQPuN’ ‘~/tmp/scratch/Rtmpoefxyf’   ‘~/tmp/scratch/Rtmpoi25Sn’ ‘~/tmp/scratch/Rtmpp9nQXP’   ‘~/tmp/scratch/RtmppZ7aBB’ ‘~/tmp/scratch/RtmpqAzsRB’   ‘~/tmp/scratch/Rtmpqrdis3’ ‘~/tmp/scratch/RtmprTbYsb’   ‘~/tmp/scratch/Rtmprb8E2o’ ‘~/tmp/scratch/RtmprsIUOd’   ‘~/tmp/scratch/Rtmps4y1Dq’ ‘~/tmp/scratch/RtmpsBMFsO’   ‘~/tmp/scratch/RtmpsPiaKl’ ‘~/tmp/scratch/RtmpsYhCZD’   ‘~/tmp/scratch/RtmpstE4dx’ ‘~/tmp/scratch/RtmptL9PW9’   ‘~/tmp/scratch/RtmptpanV6’ ‘~/tmp/scratch/Rtmpu1mKFr’   ‘~/tmp/scratch/RtmpwLlMLT’ ‘~/tmp/scratch/RtmpwrKkAC’   ‘~/tmp/scratch/Rtmpx8WHOA’ ‘~/tmp/scratch/RtmpxFVOuj’   ‘~/tmp/scratch/RtmpxIEFJI’ ‘~/tmp/scratch/RtmpxaDNIT’   ‘~/tmp/scratch/Rtmpyhfx8Z’ ‘~/tmp/scratch/Rtmpyl7p9f’   ‘~/tmp/scratch/RtmpyxmAin’ ‘~/tmp/scratch/Rtmpz4ao0O’   ‘~/tmp/scratch/RtmpzVTdmE’ ‘~/tmp/scratch/RtmpzhRaqP’   ‘~/tmp/scratch/RtmpzorzjR’ ‘~/tmp/scratch/cc1XdfJr.s’   ‘~/tmp/scratch/quarto-session7e1ada4dbacefdbb’   ‘~/tmp/scratch/xvfb-run.0f0u9i’ ‘~/tmp/scratch/xvfb-run.0tiNjm’   ‘~/tmp/scratch/xvfb-run.1s5Z0Y’ ‘~/tmp/scratch/xvfb-run.2gzplf’   ‘~/tmp/scratch/xvfb-run.31LEfM’ ‘~/tmp/scratch/xvfb-run.4RGZF4’   ‘~/tmp/scratch/xvfb-run.5EQNJf’ ‘~/tmp/scratch/xvfb-run.64oPgR’   ‘~/tmp/scratch/xvfb-run.9WHJIJ’ ‘~/tmp/scratch/xvfb-run.9lO4lh’   ‘~/tmp/scratch/xvfb-run.BJzlto’ ‘~/tmp/scratch/xvfb-run.CAngh5’   ‘~/tmp/scratch/xvfb-run.CnWJnn’ ‘~/tmp/scratch/xvfb-run.CxTKFS’   ‘~/tmp/scratch/xvfb-run.D8IaAp’ ‘~/tmp/scratch/xvfb-run.ECKJDM’   ‘~/tmp/scratch/xvfb-run.FEkvSZ’ ‘~/tmp/scratch/xvfb-run.HgKsk4’   ‘~/tmp/scratch/xvfb-run.HuVYJZ’ ‘~/tmp/scratch/xvfb-run.IgAPUm’   ‘~/tmp/scratch/xvfb-run.KLH3yu’ ‘~/tmp/scratch/xvfb-run.KV34dA’   ‘~/tmp/scratch/xvfb-run.KneheV’ ‘~/tmp/scratch/xvfb-run.KwQSNg’   ‘~/tmp/scratch/xvfb-run.MeskVO’ ‘~/tmp/scratch/xvfb-run.NlO1sv’   ‘~/tmp/scratch/xvfb-run.NzOrlU’ ‘~/tmp/scratch/xvfb-run.O1jyrS’   ‘~/tmp/scratch/xvfb-run.OBzeVi’ ‘~/tmp/scratch/xvfb-run.PzAtsh’   ‘~/tmp/scratch/xvfb-run.Q2tDh6’ ‘~/tmp/scratch/xvfb-run.QrlI9j’   ‘~/tmp/scratch/xvfb-run.SpffRv’ ‘~/tmp/scratch/xvfb-run.TnTYwn’   ‘~/tmp/scratch/xvfb-run.V7XoUd’ ‘~/tmp/scratch/xvfb-run.WbDObE’   ‘~/tmp/scratch/xvfb-run.XJr0r1’ ‘~/tmp/scratch/xvfb-run.ZJ9zh6’   ‘~/tmp/scratch/xvfb-run.b0Q4yd’ ‘~/tmp/scratch/xvfb-run.c72OvL’   ‘~/tmp/scratch/xvfb-run.d3J2EB’ ‘~/tmp/scratch/xvfb-run.dZmW3V’   ‘~/tmp/scratch/xvfb-run.dwmOJc’ ‘~/tmp/scratch/xvfb-run.ey7P1Y’   ‘~/tmp/scratch/xvfb-run.hC9CEv’ ‘~/tmp/scratch/xvfb-run.i2xOY3’   ‘~/tmp/scratch/xvfb-run.lBa1aY’ ‘~/tmp/scratch/xvfb-run.lDgPCm’   ‘~/tmp/scratch/xvfb-run.lIUebU’ ‘~/tmp/scratch/xvfb-run.mER2uh’   ‘~/tmp/scratch/xvfb-run.mnoCFH’ ‘~/tmp/scratch/xvfb-run.plmypg’   ‘~/tmp/scratch/xvfb-run.pqXlaP’ ‘~/tmp/scratch/xvfb-run.qdUI5K’   ‘~/tmp/scratch/xvfb-run.rWtMiW’ ‘~/tmp/scratch/xvfb-run.sSWSV3’   ‘~/tmp/scratch/xvfb-run.uNHsMb’ ‘~/tmp/scratch/xvfb-run.vT3qRS’   ‘~/tmp/scratch/xvfb-run.vlY57Y’ ‘~/tmp/scratch/xvfb-run.vyOgP7’   ‘~/tmp/scratch/xvfb-run.ykmLfG’ ‘~/tmp/scratch/xvfb-run.yq5F5J’   ‘~/tmp/scratch/xvfb-run.zJMVo3’
• DONE

Status: 1 NOTE