- using R Under development (unstable) (2026-07-30 r90327)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-16 (Debian 16.1.0-3) 16.1.0
GNU Fortran (Debian 16.1.0-3) 16.1.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
* current time: 2026-07-31 18:29:37 UTC
- checking for file ‘transitiontrees/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘transitiontrees’ version ‘0.1.2’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [2s/2s] OK
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘transitiontrees’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [2s/2s] OK
- checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the package can be unloaded cleanly ... [1s/1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the namespace can be unloaded cleanly ... [1s/2s] OK
- checking loading without being on the library search path ... [1s/1s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [15s/16s] OK
- checking Rd files ... [0s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [4s/4s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [51s/54s] OK
Running ‘testthat.R’ [51s/54s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [278s/331s] OK
- checking PDF version of manual ... [5s/8s] OK
- checking HTML version of manual ... [2s/2s] OK
- checking for non-standard things in the check directory ... OK
- checking for new files in some other directories ... NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp0OMojS’ ‘~/tmp/scratch/Rtmp0fsLwo’
‘~/tmp/scratch/Rtmp0kIyER’ ‘~/tmp/scratch/Rtmp17DTdq’
‘~/tmp/scratch/Rtmp18HWwL’ ‘~/tmp/scratch/Rtmp1CX7c7’
‘~/tmp/scratch/Rtmp1j1tYc’ ‘~/tmp/scratch/Rtmp2oSUoV’
‘~/tmp/scratch/Rtmp2ovao9’ ‘~/tmp/scratch/Rtmp2rWVZ9’
‘~/tmp/scratch/Rtmp3UIIlW’ ‘~/tmp/scratch/Rtmp3vvGKz’
‘~/tmp/scratch/Rtmp3yXXeL’ ‘~/tmp/scratch/Rtmp4FrmzD’
‘~/tmp/scratch/Rtmp4RPDQL’ ‘~/tmp/scratch/Rtmp5HEX7T’
‘~/tmp/scratch/Rtmp5nMo3X’ ‘~/tmp/scratch/Rtmp5xhaFp’
‘~/tmp/scratch/Rtmp66uW3h’ ‘~/tmp/scratch/Rtmp67fr0w’
‘~/tmp/scratch/Rtmp6Y8Idc’ ‘~/tmp/scratch/Rtmp6bUDwS’
‘~/tmp/scratch/Rtmp7day4y’ ‘~/tmp/scratch/Rtmp85m0g6’
‘~/tmp/scratch/Rtmp9MTwS2’ ‘~/tmp/scratch/Rtmp9P8jOc’
‘~/tmp/scratch/RtmpA3upcz’ ‘~/tmp/scratch/RtmpAJlpl0’
‘~/tmp/scratch/RtmpASSAOW’ ‘~/tmp/scratch/RtmpAapuLJ’
‘~/tmp/scratch/RtmpAcwHpz’ ‘~/tmp/scratch/RtmpBEdE9H’
‘~/tmp/scratch/RtmpCLiJIJ’ ‘~/tmp/scratch/RtmpCs793i’
‘~/tmp/scratch/RtmpD3DPEQ’ ‘~/tmp/scratch/RtmpDXW8jc’
‘~/tmp/scratch/RtmpDk6ppC’ ‘~/tmp/scratch/RtmpDxXagz’
‘~/tmp/scratch/RtmpE0b6r4’ ‘~/tmp/scratch/RtmpE1YFZv’
‘~/tmp/scratch/RtmpE1hOp9’ ‘~/tmp/scratch/RtmpEDqt56’
‘~/tmp/scratch/RtmpEGzxMJ’ ‘~/tmp/scratch/RtmpEH8Brf’
‘~/tmp/scratch/RtmpEVjMxu’ ‘~/tmp/scratch/RtmpEas8uP’
‘~/tmp/scratch/RtmpEdjz2R’ ‘~/tmp/scratch/RtmpF63CWJ’
‘~/tmp/scratch/RtmpGShwFx’ ‘~/tmp/scratch/RtmpGgJcbC’
‘~/tmp/scratch/RtmpGktWpC’ ‘~/tmp/scratch/RtmpI4kMts’
‘~/tmp/scratch/RtmpILLajz’ ‘~/tmp/scratch/RtmpJWLIUd’
‘~/tmp/scratch/RtmpJepTAH’ ‘~/tmp/scratch/RtmpJvIw1T’
‘~/tmp/scratch/RtmpJvRSxj’ ‘~/tmp/scratch/RtmpK13PjM’
‘~/tmp/scratch/RtmpL2Koma’ ‘~/tmp/scratch/RtmpL4Qma4’
‘~/tmp/scratch/RtmpLC2Jjr’ ‘~/tmp/scratch/RtmpLCwVSL’
‘~/tmp/scratch/RtmpLSs0DZ’ ‘~/tmp/scratch/RtmpLyAcv5’
‘~/tmp/scratch/RtmpMR5uHk’ ‘~/tmp/scratch/RtmpMXi2kG’
‘~/tmp/scratch/RtmpMnDu9w’ ‘~/tmp/scratch/RtmpNixYkv’
‘~/tmp/scratch/RtmpPXS70V’ ‘~/tmp/scratch/RtmpPYIUDD’
‘~/tmp/scratch/RtmpPhGtLj’ ‘~/tmp/scratch/RtmpPsrT9E’
‘~/tmp/scratch/RtmpQiIwKP’ ‘~/tmp/scratch/RtmpQrGqYf’
‘~/tmp/scratch/RtmpR0Dq5K’ ‘~/tmp/scratch/RtmpS1PFyT’
‘~/tmp/scratch/RtmpSGwI7U’ ‘~/tmp/scratch/RtmpSJsw4s’
‘~/tmp/scratch/RtmpSl2iTj’ ‘~/tmp/scratch/RtmpT3hRfC’
‘~/tmp/scratch/RtmpTEmpY2’ ‘~/tmp/scratch/RtmpTpYrHL’
‘~/tmp/scratch/RtmpUf7ChX’ ‘~/tmp/scratch/RtmpUt2y4s’
‘~/tmp/scratch/RtmpVTR321’ ‘~/tmp/scratch/RtmpVmvMPn’
‘~/tmp/scratch/RtmpWVQmlv’ ‘~/tmp/scratch/RtmpWWLU9Y’
‘~/tmp/scratch/RtmpWWeB4M’ ‘~/tmp/scratch/RtmpWY31CZ’
‘~/tmp/scratch/RtmpWptKLP’ ‘~/tmp/scratch/RtmpXe4JwG’
‘~/tmp/scratch/RtmpY2RwOV’ ‘~/tmp/scratch/RtmpZfMaIV’
‘~/tmp/scratch/RtmpZusfPm’ ‘~/tmp/scratch/RtmpaCExsk’
‘~/tmp/scratch/RtmpaPi3EF’ ‘~/tmp/scratch/RtmpapLZUm’
‘~/tmp/scratch/RtmpatB19O’ ‘~/tmp/scratch/Rtmpawc30j’
‘~/tmp/scratch/Rtmpb2618j’ ‘~/tmp/scratch/Rtmpbz35BQ’
‘~/tmp/scratch/RtmpcNofII’ ‘~/tmp/scratch/RtmpdNvPIG’
‘~/tmp/scratch/RtmpdnKSjf’ ‘~/tmp/scratch/RtmpdxFkjn’
‘~/tmp/scratch/RtmpeWDf8L’ ‘~/tmp/scratch/RtmperXx2s’
‘~/tmp/scratch/Rtmpf3sYRy’ ‘~/tmp/scratch/Rtmpf4Z9mi’
‘~/tmp/scratch/Rtmpf8oBly’ ‘~/tmp/scratch/RtmpfLF9b0’
‘~/tmp/scratch/RtmpfpxwrS’ ‘~/tmp/scratch/RtmpftWarz’
‘~/tmp/scratch/RtmpgHAuAq’ ‘~/tmp/scratch/RtmpgMC4Hj’
‘~/tmp/scratch/RtmpgXsUxk’ ‘~/tmp/scratch/RtmpgwoQPI’
‘~/tmp/scratch/RtmpgzTYhR’ ‘~/tmp/scratch/RtmphTifLu’
‘~/tmp/scratch/RtmphYNWD5’ ‘~/tmp/scratch/RtmphyxLik’
‘~/tmp/scratch/Rtmpi7AA0t’ ‘~/tmp/scratch/Rtmpie89RG’
‘~/tmp/scratch/RtmpikRsqw’ ‘~/tmp/scratch/RtmpjEwzbM’
‘~/tmp/scratch/RtmpjLsURj’ ‘~/tmp/scratch/RtmpjnabZT’
‘~/tmp/scratch/Rtmpk3MYRa’ ‘~/tmp/scratch/Rtmpk8WY0w’
‘~/tmp/scratch/RtmpkXmiXs’ ‘~/tmp/scratch/Rtmpkzbxcf’
‘~/tmp/scratch/RtmplBBfiN’ ‘~/tmp/scratch/RtmplEpN2X’
‘~/tmp/scratch/RtmplfSeMi’ ‘~/tmp/scratch/RtmpmJuA2o’
‘~/tmp/scratch/RtmpmXd6ln’ ‘~/tmp/scratch/Rtmpmj73RA’
‘~/tmp/scratch/Rtmpmlr3Ma’ ‘~/tmp/scratch/Rtmpn8VwHM’
‘~/tmp/scratch/RtmpnCPLZF’ ‘~/tmp/scratch/RtmpokBNqs’
‘~/tmp/scratch/RtmppQXP2S’ ‘~/tmp/scratch/RtmpqJJdHK’
‘~/tmp/scratch/RtmpqS6oec’ ‘~/tmp/scratch/RtmpqebhPw’
‘~/tmp/scratch/RtmpqsIJtm’ ‘~/tmp/scratch/RtmprP6rRE’
‘~/tmp/scratch/RtmprfzjGZ’ ‘~/tmp/scratch/Rtmps0TTfh’
‘~/tmp/scratch/RtmpsJ9Ge8’ ‘~/tmp/scratch/Rtmpsm7XT9’
‘~/tmp/scratch/RtmptojP9f’ ‘~/tmp/scratch/RtmpucLYBq’
‘~/tmp/scratch/RtmpujY7ZJ’ ‘~/tmp/scratch/RtmpumPrZ4’
‘~/tmp/scratch/RtmpveA1cZ’ ‘~/tmp/scratch/RtmpwKCaGj’
‘~/tmp/scratch/RtmpwxpQXn’ ‘~/tmp/scratch/Rtmpx7lfFG’
‘~/tmp/scratch/RtmpxCPiY2’ ‘~/tmp/scratch/RtmpxIFabG’
‘~/tmp/scratch/RtmpxsGACC’ ‘~/tmp/scratch/RtmpyRmEz0’
‘~/tmp/scratch/Rtmpyw35Cj’ ‘~/tmp/scratch/RtmpzW6qsS’
‘~/tmp/scratch/RtmpzkKCeb’ ‘~/tmp/scratch/xvfb-run.2AFX42’
‘~/tmp/scratch/xvfb-run.2dBgYs’ ‘~/tmp/scratch/xvfb-run.6PxayU’
‘~/tmp/scratch/xvfb-run.6tovCy’ ‘~/tmp/scratch/xvfb-run.71x82F’
‘~/tmp/scratch/xvfb-run.83JR5e’ ‘~/tmp/scratch/xvfb-run.8RLMxY’
‘~/tmp/scratch/xvfb-run.94Yg5R’ ‘~/tmp/scratch/xvfb-run.9dxCpm’
‘~/tmp/scratch/xvfb-run.BG46Z7’ ‘~/tmp/scratch/xvfb-run.CPfx1q’
‘~/tmp/scratch/xvfb-run.DEMcQm’ ‘~/tmp/scratch/xvfb-run.DloM8W’
‘~/tmp/scratch/xvfb-run.EntWqf’ ‘~/tmp/scratch/xvfb-run.Fco3mP’
‘~/tmp/scratch/xvfb-run.HGHd5p’ ‘~/tmp/scratch/xvfb-run.HSHnjb’
‘~/tmp/scratch/xvfb-run.KUVagw’ ‘~/tmp/scratch/xvfb-run.LWOn0n’
‘~/tmp/scratch/xvfb-run.LldCHK’ ‘~/tmp/scratch/xvfb-run.LszIjB’
‘~/tmp/scratch/xvfb-run.MbmBMO’ ‘~/tmp/scratch/xvfb-run.Mr7siK’
‘~/tmp/scratch/xvfb-run.NB5uc4’ ‘~/tmp/scratch/xvfb-run.OarbBw’
‘~/tmp/scratch/xvfb-run.POW5M6’ ‘~/tmp/scratch/xvfb-run.Q3kBkT’
‘~/tmp/scratch/xvfb-run.QNbX6w’ ‘~/tmp/scratch/xvfb-run.QOljSl’
‘~/tmp/scratch/xvfb-run.RZ2ly0’ ‘~/tmp/scratch/xvfb-run.SaT2bC’
‘~/tmp/scratch/xvfb-run.TrgKpt’ ‘~/tmp/scratch/xvfb-run.VpqxaR’
‘~/tmp/scratch/xvfb-run.WLoyVJ’ ‘~/tmp/scratch/xvfb-run.Wg26yV’
‘~/tmp/scratch/xvfb-run.XYlhiN’ ‘~/tmp/scratch/xvfb-run.Z2qmj6’
‘~/tmp/scratch/xvfb-run.Z3FqoI’ ‘~/tmp/scratch/xvfb-run.ZUhDlg’
‘~/tmp/scratch/xvfb-run.ZoEg7y’ ‘~/tmp/scratch/xvfb-run.Zu4h4P’
‘~/tmp/scratch/xvfb-run.aac1Nc’ ‘~/tmp/scratch/xvfb-run.bP7rUd’
‘~/tmp/scratch/xvfb-run.beMacy’ ‘~/tmp/scratch/xvfb-run.cdJ6If’
‘~/tmp/scratch/xvfb-run.cl4lp5’ ‘~/tmp/scratch/xvfb-run.cm0qR4’
‘~/tmp/scratch/xvfb-run.dHLygZ’ ‘~/tmp/scratch/xvfb-run.gOQwLt’
‘~/tmp/scratch/xvfb-run.geuvZw’ ‘~/tmp/scratch/xvfb-run.hsG1Yf’
‘~/tmp/scratch/xvfb-run.i4c15O’ ‘~/tmp/scratch/xvfb-run.iQEsOC’
‘~/tmp/scratch/xvfb-run.iR772P’ ‘~/tmp/scratch/xvfb-run.ireCvs’
‘~/tmp/scratch/xvfb-run.j166MV’ ‘~/tmp/scratch/xvfb-run.jfbL8f’
‘~/tmp/scratch/xvfb-run.jgxA2h’ ‘~/tmp/scratch/xvfb-run.ju4h9v’
‘~/tmp/scratch/xvfb-run.kpChQE’ ‘~/tmp/scratch/xvfb-run.lAQtJd’
‘~/tmp/scratch/xvfb-run.lV8Tgw’ ‘~/tmp/scratch/xvfb-run.mG5iSQ’
‘~/tmp/scratch/xvfb-run.oBZKOY’ ‘~/tmp/scratch/xvfb-run.pKcGDF’
‘~/tmp/scratch/xvfb-run.qlLDeM’ ‘~/tmp/scratch/xvfb-run.rBMOqf’
‘~/tmp/scratch/xvfb-run.swrE3t’ ‘~/tmp/scratch/xvfb-run.t05eYc’
‘~/tmp/scratch/xvfb-run.tEoMJI’ ‘~/tmp/scratch/xvfb-run.tcpC6s’
‘~/tmp/scratch/xvfb-run.tjctKr’ ‘~/tmp/scratch/xvfb-run.uCR6wD’
‘~/tmp/scratch/xvfb-run.vNWF8U’ ‘~/tmp/scratch/xvfb-run.vR3J2Y’
‘~/tmp/scratch/xvfb-run.y3bHX0’ ‘~/tmp/scratch/xvfb-run.yFGJny’
- DONE
Status: 1 NOTE