- using R Under development (unstable) (2026-07-30 r90327)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-16 (Debian 16.1.0-3) 16.1.0
GNU Fortran (Debian 16.1.0-3) 16.1.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
* current time: 2026-07-31 18:27:40 UTC
- checking for file ‘topologyR/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘topologyR’ version ‘0.2.0’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [1s/1s] OK
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘topologyR’ can be installed ... OK
See the install log for details.
- used C++ compiler: ‘g++-16 (Debian 16.1.0-3) 16.1.0’
- checking C++ specification ... INFO
specified C++17
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [2s/2s] OK
- checking whether the package can be loaded with stated dependencies ... [1s/2s] OK
- checking whether the package can be unloaded cleanly ... [1s/2s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
- checking loading without being on the library search path ... [1s/2s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [8s/13s] OK
- checking Rd files ... [0s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking examples ... [2s/2s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [4s/5s] OK
Running ‘testthat.R’ [3s/5s]
- checking PDF version of manual ... [4s/7s] OK
- checking HTML version of manual ... [1s/1s] OK
- checking for non-standard things in the check directory ... OK
- checking for new files in some other directories ... NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp1qpxBZ’ ‘~/tmp/scratch/Rtmp1s9il6’
‘~/tmp/scratch/Rtmp24r78K’ ‘~/tmp/scratch/Rtmp2C1rxb’
‘~/tmp/scratch/Rtmp2LfsXh’ ‘~/tmp/scratch/Rtmp2MBpxp’
‘~/tmp/scratch/Rtmp2oCeUS’ ‘~/tmp/scratch/Rtmp3FvDFP’
‘~/tmp/scratch/Rtmp5Ir1xh’ ‘~/tmp/scratch/Rtmp5OCRtB’
‘~/tmp/scratch/Rtmp6AWGQ7’ ‘~/tmp/scratch/Rtmp8Hykgr’
‘~/tmp/scratch/Rtmp8N5o3c’ ‘~/tmp/scratch/Rtmp8bSf8s’
‘~/tmp/scratch/Rtmp99DI7p’ ‘~/tmp/scratch/Rtmp9EWvPA’
‘~/tmp/scratch/Rtmp9sM8gR’ ‘~/tmp/scratch/RtmpACOyTQ’
‘~/tmp/scratch/RtmpAjRAAZ’ ‘~/tmp/scratch/RtmpBBFleH’
‘~/tmp/scratch/RtmpCAHxqL’ ‘~/tmp/scratch/RtmpCDLKeq’
‘~/tmp/scratch/RtmpFrTL3P’ ‘~/tmp/scratch/RtmpFzFVgC’
‘~/tmp/scratch/RtmpGVu6hE’ ‘~/tmp/scratch/RtmpGvQA5I’
‘~/tmp/scratch/RtmpHY1XtL’ ‘~/tmp/scratch/RtmpHmeo0j’
‘~/tmp/scratch/RtmpHvwrf7’ ‘~/tmp/scratch/RtmpIXbEcA’
‘~/tmp/scratch/RtmpIjE4cq’ ‘~/tmp/scratch/RtmpIyzNA0’
‘~/tmp/scratch/RtmpJk1ooD’ ‘~/tmp/scratch/RtmpJsWOWX’
‘~/tmp/scratch/RtmpLAQJ7l’ ‘~/tmp/scratch/RtmpLBMJgZ’
‘~/tmp/scratch/RtmpMhkQns’ ‘~/tmp/scratch/RtmpNAcJNl’
‘~/tmp/scratch/RtmpOFLq7X’ ‘~/tmp/scratch/RtmpOuZGiZ’
‘~/tmp/scratch/RtmpPMKOxJ’ ‘~/tmp/scratch/RtmpPN0t9K’
‘~/tmp/scratch/RtmpPOMwdD’ ‘~/tmp/scratch/RtmpQMpPKl’
‘~/tmp/scratch/RtmpQkwK8N’ ‘~/tmp/scratch/RtmpRDHwCM’
‘~/tmp/scratch/RtmpRjKFZs’ ‘~/tmp/scratch/RtmpSDW18F’
‘~/tmp/scratch/RtmpSrEPN6’ ‘~/tmp/scratch/RtmpStiS91’
‘~/tmp/scratch/RtmpSxT8Ov’ ‘~/tmp/scratch/RtmpSztdVa’
‘~/tmp/scratch/RtmpTdVqzx’ ‘~/tmp/scratch/RtmpTgA7o0’
‘~/tmp/scratch/RtmpUaOfd5’ ‘~/tmp/scratch/RtmpVY5dDv’
‘~/tmp/scratch/RtmpWRWyF0’ ‘~/tmp/scratch/RtmpXGZpN8’
‘~/tmp/scratch/RtmpXRTJvn’ ‘~/tmp/scratch/RtmpYfwhoG’
‘~/tmp/scratch/RtmpZDVZGi’ ‘~/tmp/scratch/RtmpZZaEVx’
‘~/tmp/scratch/RtmpZaYq2I’ ‘~/tmp/scratch/RtmpaKUaKN’
‘~/tmp/scratch/RtmpaPXCIh’ ‘~/tmp/scratch/RtmpaVcpot’
‘~/tmp/scratch/RtmpaXUNKU’ ‘~/tmp/scratch/RtmpbiPQby’
‘~/tmp/scratch/RtmpbohRF1’ ‘~/tmp/scratch/Rtmpbt6VP4’
‘~/tmp/scratch/RtmpbzG1N2’ ‘~/tmp/scratch/Rtmpc3MuNr’
‘~/tmp/scratch/Rtmpc9FoQP’ ‘~/tmp/scratch/RtmpcXe1D0’
‘~/tmp/scratch/Rtmpd7muTY’ ‘~/tmp/scratch/RtmpdQmLrV’
‘~/tmp/scratch/RtmpfFhYmh’ ‘~/tmp/scratch/RtmpgITFNA’
‘~/tmp/scratch/Rtmph2jtN9’ ‘~/tmp/scratch/RtmphBsYHa’
‘~/tmp/scratch/RtmphFpVJs’ ‘~/tmp/scratch/RtmphILwNU’
‘~/tmp/scratch/RtmphjJDrV’ ‘~/tmp/scratch/RtmpiLMrB2’
‘~/tmp/scratch/RtmpiZMtv9’ ‘~/tmp/scratch/RtmpkESVA7’
‘~/tmp/scratch/RtmpkLWPZ7’ ‘~/tmp/scratch/RtmpkkrFBA’
‘~/tmp/scratch/RtmpkztbVN’ ‘~/tmp/scratch/RtmplNxdaF’
‘~/tmp/scratch/Rtmpm0n0Mf’ ‘~/tmp/scratch/RtmpmwzUTz’
‘~/tmp/scratch/Rtmpn31ppm’ ‘~/tmp/scratch/Rtmpn6r80C’
‘~/tmp/scratch/RtmpnFp2dC’ ‘~/tmp/scratch/RtmpnwsxC3’
‘~/tmp/scratch/RtmpoAROUj’ ‘~/tmp/scratch/RtmpoOZm0P’
‘~/tmp/scratch/RtmpoQNR43’ ‘~/tmp/scratch/RtmpofZhn0’
‘~/tmp/scratch/RtmpompWhJ’ ‘~/tmp/scratch/RtmppV8xSs’
‘~/tmp/scratch/RtmpplJ2hF’ ‘~/tmp/scratch/RtmpqdlmNc’
‘~/tmp/scratch/RtmpquziZX’ ‘~/tmp/scratch/Rtmprblqgv’
‘~/tmp/scratch/RtmprfEmiM’ ‘~/tmp/scratch/RtmpriuE8t’
‘~/tmp/scratch/Rtmps9yWUz’ ‘~/tmp/scratch/RtmpsFUCYR’
‘~/tmp/scratch/RtmpsO9PtR’ ‘~/tmp/scratch/RtmpsbOZSx’
‘~/tmp/scratch/RtmpudsZXz’ ‘~/tmp/scratch/RtmpufgiSF’
‘~/tmp/scratch/RtmpuwHQOT’ ‘~/tmp/scratch/RtmpvCnQZp’
‘~/tmp/scratch/RtmpvwLI6N’ ‘~/tmp/scratch/RtmpwcU7vm’
‘~/tmp/scratch/Rtmpy6saQ6’ ‘~/tmp/scratch/xvfb-run.24NILk’
‘~/tmp/scratch/xvfb-run.2wxEhg’ ‘~/tmp/scratch/xvfb-run.3G8Mz3’
‘~/tmp/scratch/xvfb-run.4bFVVx’ ‘~/tmp/scratch/xvfb-run.8pwbdH’
‘~/tmp/scratch/xvfb-run.94M2Nk’ ‘~/tmp/scratch/xvfb-run.9EZKP4’
‘~/tmp/scratch/xvfb-run.A3wz7e’ ‘~/tmp/scratch/xvfb-run.Dv5p7y’
‘~/tmp/scratch/xvfb-run.EHvATs’ ‘~/tmp/scratch/xvfb-run.GPKYIE’
‘~/tmp/scratch/xvfb-run.Iz8WH4’ ‘~/tmp/scratch/xvfb-run.LMEltG’
‘~/tmp/scratch/xvfb-run.MgOyYK’ ‘~/tmp/scratch/xvfb-run.P45Q2F’
‘~/tmp/scratch/xvfb-run.QAszy4’ ‘~/tmp/scratch/xvfb-run.QcL31s’
‘~/tmp/scratch/xvfb-run.T6FWeb’ ‘~/tmp/scratch/xvfb-run.XVTvC2’
‘~/tmp/scratch/xvfb-run.aE78P7’ ‘~/tmp/scratch/xvfb-run.bJZbjc’
‘~/tmp/scratch/xvfb-run.cMoYzz’ ‘~/tmp/scratch/xvfb-run.fKofoV’
‘~/tmp/scratch/xvfb-run.h1ybsf’ ‘~/tmp/scratch/xvfb-run.hBqV2y’
‘~/tmp/scratch/xvfb-run.hKyGWj’ ‘~/tmp/scratch/xvfb-run.hYEeSi’
‘~/tmp/scratch/xvfb-run.hYJmYK’ ‘~/tmp/scratch/xvfb-run.mO7pwz’
‘~/tmp/scratch/xvfb-run.nbTGQ9’ ‘~/tmp/scratch/xvfb-run.qY8XhO’
‘~/tmp/scratch/xvfb-run.qk8JSy’ ‘~/tmp/scratch/xvfb-run.r7TL16’
‘~/tmp/scratch/xvfb-run.rDB4xT’ ‘~/tmp/scratch/xvfb-run.rl6ZNZ’
‘~/tmp/scratch/xvfb-run.ryJvee’ ‘~/tmp/scratch/xvfb-run.s654zH’
‘~/tmp/scratch/xvfb-run.sA2JZi’ ‘~/tmp/scratch/xvfb-run.vYp4tN’
‘~/tmp/scratch/xvfb-run.vgq9u6’ ‘~/tmp/scratch/xvfb-run.w5O6ZU’
‘~/tmp/scratch/xvfb-run.wkRx61’
- DONE
Status: 1 NOTE