• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 18:24:02 UTC
• checking for file ‘tidyseurat/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘tidyseurat’ version ‘0.8.10’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/3s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘tidyseurat’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [6s/7s] OK
• checking whether the package can be loaded with stated dependencies ... [6s/7s] OK
• checking whether the package can be unloaded cleanly ... [6s/7s] OK
• checking whether the namespace can be loaded with stated dependencies ... [5s/5s] OK
• checking whether the namespace can be unloaded cleanly ... [6s/6s] OK
• checking loading without being on the library search path ... [6s/6s] OK
• checking whether startup messages can be suppressed ... [6s/7s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [26s/30s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [12s/14s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [16s/20s] OK   Running ‘testthat.R’ [16s/19s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [21s/23s] OK
• checking PDF version of manual ... [6s/7s] OK
• checking HTML version of manual ... [3s/4s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp05zp0f’ ‘~/tmp/scratch/Rtmp1OoeSJ’   ‘~/tmp/scratch/Rtmp1Qjrii’ ‘~/tmp/scratch/Rtmp1TEArI’   ‘~/tmp/scratch/Rtmp1bKS3u’ ‘~/tmp/scratch/Rtmp1brVvk’   ‘~/tmp/scratch/Rtmp1oiHhG’ ‘~/tmp/scratch/Rtmp1viZik’   ‘~/tmp/scratch/Rtmp1wjlar’ ‘~/tmp/scratch/Rtmp26CzXL’   ‘~/tmp/scratch/Rtmp3Q1Fym’ ‘~/tmp/scratch/Rtmp3y0rvi’   ‘~/tmp/scratch/Rtmp4D4y9R’ ‘~/tmp/scratch/Rtmp50wPNo’   ‘~/tmp/scratch/Rtmp5EzYZP’ ‘~/tmp/scratch/Rtmp6BYras’   ‘~/tmp/scratch/Rtmp6Z0yNy’ ‘~/tmp/scratch/Rtmp6yku8l’   ‘~/tmp/scratch/Rtmp6zTB9R’ ‘~/tmp/scratch/Rtmp734wU9’   ‘~/tmp/scratch/Rtmp73ojvt’ ‘~/tmp/scratch/Rtmp740auv’   ‘~/tmp/scratch/Rtmp7slh0J’ ‘~/tmp/scratch/Rtmp7z4LrR’   ‘~/tmp/scratch/Rtmp84nPqH’ ‘~/tmp/scratch/Rtmp8N5o3c’   ‘~/tmp/scratch/Rtmp8SucTM’ ‘~/tmp/scratch/Rtmp8qZwkK’   ‘~/tmp/scratch/Rtmp8uP0NO’ ‘~/tmp/scratch/Rtmp9SfSw2’   ‘~/tmp/scratch/Rtmp9cqgXz’ ‘~/tmp/scratch/Rtmp9uTedY’   ‘~/tmp/scratch/RtmpACOyTQ’ ‘~/tmp/scratch/RtmpAFthqO’   ‘~/tmp/scratch/RtmpAJNvKJ’ ‘~/tmp/scratch/RtmpAaepQb’   ‘~/tmp/scratch/RtmpB30O33’ ‘~/tmp/scratch/RtmpBE3tzO’   ‘~/tmp/scratch/RtmpBKe2V0’ ‘~/tmp/scratch/RtmpBLhW7I’   ‘~/tmp/scratch/RtmpBoRDpC’ ‘~/tmp/scratch/RtmpBpaRED’   ‘~/tmp/scratch/RtmpBueISP’ ‘~/tmp/scratch/RtmpC0vGAc’   ‘~/tmp/scratch/RtmpCBCgob’ ‘~/tmp/scratch/RtmpCDLKeq’   ‘~/tmp/scratch/RtmpCKEiM8’ ‘~/tmp/scratch/RtmpCnyUYS’   ‘~/tmp/scratch/RtmpDAUt4M’ ‘~/tmp/scratch/RtmpDB7y7v’   ‘~/tmp/scratch/RtmpDjILyV’ ‘~/tmp/scratch/RtmpEgImof’   ‘~/tmp/scratch/RtmpErwuqs’ ‘~/tmp/scratch/RtmpF9QiBp’   ‘~/tmp/scratch/RtmpForVtC’ ‘~/tmp/scratch/RtmpG3Brvz’   ‘~/tmp/scratch/RtmpG4XWZW’ ‘~/tmp/scratch/RtmpGgYrky’   ‘~/tmp/scratch/RtmpGpOXJS’ ‘~/tmp/scratch/RtmpH88BFa’   ‘~/tmp/scratch/RtmpH8kUgf’ ‘~/tmp/scratch/RtmpHEwv9K’   ‘~/tmp/scratch/RtmpHk1JqM’ ‘~/tmp/scratch/RtmpHk2xwm’   ‘~/tmp/scratch/RtmpHwZn9z’ ‘~/tmp/scratch/RtmpI891iP’   ‘~/tmp/scratch/RtmpIfUFsM’ ‘~/tmp/scratch/RtmpIvTJVb’   ‘~/tmp/scratch/RtmpK5Pwc6’ ‘~/tmp/scratch/RtmpKIrfSD’   ‘~/tmp/scratch/RtmpL01ZgP’ ‘~/tmp/scratch/RtmpL8mc4z’   ‘~/tmp/scratch/RtmpLFWF8r’ ‘~/tmp/scratch/RtmpLlZhU8’   ‘~/tmp/scratch/RtmpMfmuk6’ ‘~/tmp/scratch/RtmpOLYSKi’   ‘~/tmp/scratch/RtmpPWttwV’ ‘~/tmp/scratch/RtmpPaPjHS’   ‘~/tmp/scratch/RtmpPbsiLD’ ‘~/tmp/scratch/RtmpPxGMsA’   ‘~/tmp/scratch/RtmpQKw1Dh’ ‘~/tmp/scratch/RtmpQgYnpH’   ‘~/tmp/scratch/RtmpSOTAjC’ ‘~/tmp/scratch/RtmpSZKeoV’   ‘~/tmp/scratch/RtmpSydCDZ’ ‘~/tmp/scratch/RtmpSztdVa’   ‘~/tmp/scratch/RtmpTASCzX’ ‘~/tmp/scratch/RtmpTZfvBx’   ‘~/tmp/scratch/RtmpTaCthE’ ‘~/tmp/scratch/RtmpTbfo98’   ‘~/tmp/scratch/RtmpTbnHw2’ ‘~/tmp/scratch/RtmpTg34sG’   ‘~/tmp/scratch/RtmpUqHGjH’ ‘~/tmp/scratch/RtmpUwwFkc’   ‘~/tmp/scratch/RtmpVY5dDv’ ‘~/tmp/scratch/RtmpX9dK7W’   ‘~/tmp/scratch/RtmpXXYbwi’ ‘~/tmp/scratch/RtmpXxgykn’   ‘~/tmp/scratch/RtmpYWqUS5’ ‘~/tmp/scratch/RtmpYa9zq5’   ‘~/tmp/scratch/RtmpaGeKHN’ ‘~/tmp/scratch/RtmpaWXCmJ’   ‘~/tmp/scratch/RtmpaiNBTM’ ‘~/tmp/scratch/RtmpazmH0f’   ‘~/tmp/scratch/Rtmpbt6VP4’ ‘~/tmp/scratch/RtmpbvguBS’   ‘~/tmp/scratch/RtmpcDo17Q’ ‘~/tmp/scratch/RtmpcVjTwI’   ‘~/tmp/scratch/RtmpcdgV1h’ ‘~/tmp/scratch/Rtmpcw9DjS’   ‘~/tmp/scratch/RtmpdGojSY’ ‘~/tmp/scratch/RtmpdPcgyH’   ‘~/tmp/scratch/RtmpddDcBM’ ‘~/tmp/scratch/Rtmpde5L13’   ‘~/tmp/scratch/RtmpdwZ3SO’ ‘~/tmp/scratch/Rtmpe3RkQP’   ‘~/tmp/scratch/Rtmpe7BQ2K’ ‘~/tmp/scratch/RtmpeeqlIm’   ‘~/tmp/scratch/Rtmpet6krs’ ‘~/tmp/scratch/Rtmpf4EnHK’   ‘~/tmp/scratch/Rtmpf8pNeL’ ‘~/tmp/scratch/RtmpfYvBzq’   ‘~/tmp/scratch/RtmpgBEY2m’ ‘~/tmp/scratch/RtmpgqnJY3’   ‘~/tmp/scratch/Rtmph2jtN9’ ‘~/tmp/scratch/Rtmph3S5n7’   ‘~/tmp/scratch/RtmphNoSGX’ ‘~/tmp/scratch/RtmphjJDrV’   ‘~/tmp/scratch/RtmphnDL8d’ ‘~/tmp/scratch/RtmphvuEZf’   ‘~/tmp/scratch/RtmpiIfFST’ ‘~/tmp/scratch/RtmpiVn6kA’   ‘~/tmp/scratch/Rtmpij6kAP’ ‘~/tmp/scratch/RtmpjYUy7x’   ‘~/tmp/scratch/RtmpjqasJ7’ ‘~/tmp/scratch/Rtmpk728e6’   ‘~/tmp/scratch/RtmpkM8Phg’ ‘~/tmp/scratch/Rtmpkpewsy’   ‘~/tmp/scratch/RtmpkztbVN’ ‘~/tmp/scratch/Rtmpl1R3P4’   ‘~/tmp/scratch/RtmpmOVwRP’ ‘~/tmp/scratch/RtmpmQHExq’   ‘~/tmp/scratch/RtmpmwzUTz’ ‘~/tmp/scratch/RtmpmxSGUT’   ‘~/tmp/scratch/Rtmpna9Hdc’ ‘~/tmp/scratch/Rtmpo3tlyP’   ‘~/tmp/scratch/RtmppvPFfQ’ ‘~/tmp/scratch/RtmpqJexGD’   ‘~/tmp/scratch/Rtmpr362Wv’ ‘~/tmp/scratch/Rtmprm53WN’   ‘~/tmp/scratch/Rtmps0OJss’ ‘~/tmp/scratch/Rtmps8rJdp’   ‘~/tmp/scratch/RtmpsJuyqP’ ‘~/tmp/scratch/Rtmpsq2t5N’   ‘~/tmp/scratch/Rtmptn8cPu’ ‘~/tmp/scratch/Rtmpu1JzDD’   ‘~/tmp/scratch/Rtmpu3fJTD’ ‘~/tmp/scratch/RtmpuOXOyi’   ‘~/tmp/scratch/RtmpuRnSpQ’ ‘~/tmp/scratch/RtmpufgiSF’   ‘~/tmp/scratch/RtmpvsXP5l’ ‘~/tmp/scratch/Rtmpvwilkj’   ‘~/tmp/scratch/Rtmpw2MgFd’ ‘~/tmp/scratch/RtmpxNZRFn’   ‘~/tmp/scratch/Rtmpxng93q’ ‘~/tmp/scratch/RtmpxtXKLW’   ‘~/tmp/scratch/Rtmpy0y4oh’ ‘~/tmp/scratch/Rtmpy9K0Mp’   ‘~/tmp/scratch/RtmpzAAky7’ ‘~/tmp/scratch/xvfb-run.0ieySU’   ‘~/tmp/scratch/xvfb-run.0s5kSH’ ‘~/tmp/scratch/xvfb-run.1YWSpC’   ‘~/tmp/scratch/xvfb-run.46Tx9F’ ‘~/tmp/scratch/xvfb-run.47t1g3’   ‘~/tmp/scratch/xvfb-run.5lM9MU’ ‘~/tmp/scratch/xvfb-run.74PCFO’   ‘~/tmp/scratch/xvfb-run.7DEzky’ ‘~/tmp/scratch/xvfb-run.7uyrpV’   ‘~/tmp/scratch/xvfb-run.8pwbdH’ ‘~/tmp/scratch/xvfb-run.9mXxB3’   ‘~/tmp/scratch/xvfb-run.A3wz7e’ ‘~/tmp/scratch/xvfb-run.AEp1z2’   ‘~/tmp/scratch/xvfb-run.D5tSEQ’ ‘~/tmp/scratch/xvfb-run.DrDcFm’   ‘~/tmp/scratch/xvfb-run.EB7crB’ ‘~/tmp/scratch/xvfb-run.EYnUln’   ‘~/tmp/scratch/xvfb-run.EcgvvV’ ‘~/tmp/scratch/xvfb-run.FOVlpm’   ‘~/tmp/scratch/xvfb-run.FOk2mJ’ ‘~/tmp/scratch/xvfb-run.GYgHHi’   ‘~/tmp/scratch/xvfb-run.H16O7q’ ‘~/tmp/scratch/xvfb-run.J4dlrv’   ‘~/tmp/scratch/xvfb-run.JVzhQj’ ‘~/tmp/scratch/xvfb-run.K0cwv5’   ‘~/tmp/scratch/xvfb-run.NyRoLa’ ‘~/tmp/scratch/xvfb-run.OBiZL2’   ‘~/tmp/scratch/xvfb-run.OT4dH0’ ‘~/tmp/scratch/xvfb-run.PP2ilO’   ‘~/tmp/scratch/xvfb-run.QEtd62’ ‘~/tmp/scratch/xvfb-run.QcBy9h’   ‘~/tmp/scratch/xvfb-run.RSkRjK’ ‘~/tmp/scratch/xvfb-run.TMmoxh’   ‘~/tmp/scratch/xvfb-run.Tn2E87’ ‘~/tmp/scratch/xvfb-run.UFHpBa’   ‘~/tmp/scratch/xvfb-run.UrPn6q’ ‘~/tmp/scratch/xvfb-run.Uyukpe’   ‘~/tmp/scratch/xvfb-run.WdLnZE’ ‘~/tmp/scratch/xvfb-run.X2AAw6’   ‘~/tmp/scratch/xvfb-run.XRmckd’ ‘~/tmp/scratch/xvfb-run.XkH5rU’   ‘~/tmp/scratch/xvfb-run.XpHxdF’ ‘~/tmp/scratch/xvfb-run.Y5TkSM’   ‘~/tmp/scratch/xvfb-run.Y6xVnE’ ‘~/tmp/scratch/xvfb-run.YW3zS7’   ‘~/tmp/scratch/xvfb-run.axSNRn’ ‘~/tmp/scratch/xvfb-run.b7ZGlK’   ‘~/tmp/scratch/xvfb-run.cXYN1K’ ‘~/tmp/scratch/xvfb-run.d5iuzz’   ‘~/tmp/scratch/xvfb-run.g9yrUY’ ‘~/tmp/scratch/xvfb-run.gFJEyJ’   ‘~/tmp/scratch/xvfb-run.hdLJdy’ ‘~/tmp/scratch/xvfb-run.k7Goo0’   ‘~/tmp/scratch/xvfb-run.mBQaum’ ‘~/tmp/scratch/xvfb-run.mVOohv’   ‘~/tmp/scratch/xvfb-run.o9a2nZ’ ‘~/tmp/scratch/xvfb-run.oXCwtQ’   ‘~/tmp/scratch/xvfb-run.oxLD1f’ ‘~/tmp/scratch/xvfb-run.q2H5kd’   ‘~/tmp/scratch/xvfb-run.q7fg4V’ ‘~/tmp/scratch/xvfb-run.qczkKd’   ‘~/tmp/scratch/xvfb-run.rDB4xT’ ‘~/tmp/scratch/xvfb-run.rjwbOs’   ‘~/tmp/scratch/xvfb-run.rl6ZNZ’ ‘~/tmp/scratch/xvfb-run.s654zH’   ‘~/tmp/scratch/xvfb-run.sdT9ir’ ‘~/tmp/scratch/xvfb-run.t3ilTc’   ‘~/tmp/scratch/xvfb-run.uVoeMZ’ ‘~/tmp/scratch/xvfb-run.umQ0RV’   ‘~/tmp/scratch/xvfb-run.w5O6ZU’ ‘~/tmp/scratch/xvfb-run.wgMAbv’   ‘~/tmp/scratch/xvfb-run.wySkcp’ ‘~/tmp/scratch/xvfb-run.y4tgze’   ‘/dev/shm/listcols’ ‘/dev/shm/listcols/buffers’   ‘/dev/shm/listcols/buffers/data’ ‘/dev/shm/listcols/buffers/data/a’   ‘/dev/shm/listcols/buffers/data/b’ ‘/dev/shm/listcols/buffers/data/c’   ‘/dev/shm/mtcars’ ‘/dev/shm/mtcars/buffers’   ‘/dev/shm/mtcars/buffers/data’   ‘/dev/shm/mtcars/buffers/data/__tiledb_rows’   ‘/dev/shm/mtcars/buffers/data/am’ ‘/dev/shm/mtcars/buffers/data/carb’   ‘/dev/shm/mtcars/buffers/data/cyl’   ‘/dev/shm/mtcars/buffers/data/disp’   ‘/dev/shm/mtcars/buffers/data/drat’   ‘/dev/shm/mtcars/buffers/data/gear’ ‘/dev/shm/mtcars/buffers/data/hp’   ‘/dev/shm/mtcars/buffers/data/mpg’   ‘/dev/shm/mtcars/buffers/data/qsec’ ‘/dev/shm/mtcars/buffers/data/vs’   ‘/dev/shm/mtcars/buffers/data/wt’ ‘/dev/shm/penguins’   ‘/dev/shm/penguins/buffers’ ‘/dev/shm/penguins/buffers/data’   ‘/dev/shm/penguins/buffers/data/__tiledb_rows’   ‘/dev/shm/penguins/buffers/data/bill_depth_mm’   ‘/dev/shm/penguins/buffers/data/bill_length_mm’   ‘/dev/shm/penguins/buffers/data/body_mass_g’   ‘/dev/shm/penguins/buffers/data/flipper_length_mm’   ‘/dev/shm/penguins/buffers/data/island’   ‘/dev/shm/penguins/buffers/data/sex’   ‘/dev/shm/penguins/buffers/data/species’   ‘/dev/shm/penguins/buffers/data/year’   ‘/dev/shm/penguins/buffers/validity’   ‘/dev/shm/penguins/buffers/validity/bill_depth_mm’   ‘/dev/shm/penguins/buffers/validity/bill_length_mm’   ‘/dev/shm/penguins/buffers/validity/body_mass_g’   ‘/dev/shm/penguins/buffers/validity/flipper_length_mm’   ‘/dev/shm/penguins/buffers/validity/sex’
• DONE

Status: 1 NOTE