• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 18:24:20 UTC
• checking for file ‘tidyseurat/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘tidyseurat’ version ‘0.8.10’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/3s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘tidyseurat’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [6s/8s] OK
• checking whether the package can be loaded with stated dependencies ... [6s/7s] OK
• checking whether the package can be unloaded cleanly ... [5s/7s] OK
• checking whether the namespace can be loaded with stated dependencies ... [6s/7s] OK
• checking whether the namespace can be unloaded cleanly ... [6s/8s] OK
• checking loading without being on the library search path ... [6s/8s] OK
• checking whether startup messages can be suppressed ... [6s/8s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [27s/33s] OK
• checking Rd files ... [1s/2s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [13s/15s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [16s/20s] OK   Running ‘testthat.R’ [16s/20s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [22s/29s] OK
• checking PDF version of manual ... [6s/8s] OK
• checking HTML version of manual ... [3s/3s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0G3v6e’ ‘~/tmp/scratch/Rtmp0GUpx2’   ‘~/tmp/scratch/Rtmp1Gl5C6’ ‘~/tmp/scratch/Rtmp1LPFyU’   ‘~/tmp/scratch/Rtmp1NjLIW’ ‘~/tmp/scratch/Rtmp1hSOZc’   ‘~/tmp/scratch/Rtmp2MxKxa’ ‘~/tmp/scratch/Rtmp2gFikS’   ‘~/tmp/scratch/Rtmp2y3IlQ’ ‘~/tmp/scratch/Rtmp43L86u’   ‘~/tmp/scratch/Rtmp4G8pYm’ ‘~/tmp/scratch/Rtmp4VlxBP’   ‘~/tmp/scratch/Rtmp4z14dL’ ‘~/tmp/scratch/Rtmp5k4Eir’   ‘~/tmp/scratch/Rtmp69UcGn’ ‘~/tmp/scratch/Rtmp7D2s0T’   ‘~/tmp/scratch/Rtmp7ULPXM’ ‘~/tmp/scratch/Rtmp7aKGOb’   ‘~/tmp/scratch/Rtmp7ef3GB’ ‘~/tmp/scratch/Rtmp7zBRsH’   ‘~/tmp/scratch/Rtmp81oWyU’ ‘~/tmp/scratch/Rtmp83G8j4’   ‘~/tmp/scratch/Rtmp86bSZO’ ‘~/tmp/scratch/Rtmp8QLpQ6’   ‘~/tmp/scratch/Rtmp97XZPo’ ‘~/tmp/scratch/RtmpAORMdr’   ‘~/tmp/scratch/RtmpAlhSJk’ ‘~/tmp/scratch/RtmpB1D97d’   ‘~/tmp/scratch/RtmpBDbB2u’ ‘~/tmp/scratch/RtmpBRBvNC’   ‘~/tmp/scratch/RtmpBr0KW2’ ‘~/tmp/scratch/RtmpC5VgTm’   ‘~/tmp/scratch/RtmpCv3TEk’ ‘~/tmp/scratch/RtmpDPoMft’   ‘~/tmp/scratch/RtmpDkTq7u’ ‘~/tmp/scratch/RtmpDvrbX5’   ‘~/tmp/scratch/RtmpE9oW8L’ ‘~/tmp/scratch/RtmpELLvUl’   ‘~/tmp/scratch/RtmpFHEPnw’ ‘~/tmp/scratch/RtmpFHk9YZ’   ‘~/tmp/scratch/RtmpGGdV37’ ‘~/tmp/scratch/RtmpGyfTdz’   ‘~/tmp/scratch/RtmpGzhIEX’ ‘~/tmp/scratch/RtmpHDNbIg’   ‘~/tmp/scratch/RtmpHrsWgw’ ‘~/tmp/scratch/RtmpIFn9wl’   ‘~/tmp/scratch/RtmpIMpu7a’ ‘~/tmp/scratch/RtmpIZeMjy’   ‘~/tmp/scratch/RtmpIgC84j’ ‘~/tmp/scratch/RtmpIlKxrO’   ‘~/tmp/scratch/RtmpJ1SMsF’ ‘~/tmp/scratch/RtmpJB18am’   ‘~/tmp/scratch/RtmpJCIjhZ’ ‘~/tmp/scratch/RtmpJDv23z’   ‘~/tmp/scratch/RtmpJYl3GX’ ‘~/tmp/scratch/RtmpJZCY2G’   ‘~/tmp/scratch/RtmpJjsaVk’ ‘~/tmp/scratch/RtmpLX5zaZ’   ‘~/tmp/scratch/RtmpLia2GN’ ‘~/tmp/scratch/RtmpLtMD7G’   ‘~/tmp/scratch/RtmpLzjDSW’ ‘~/tmp/scratch/RtmpM5M3Bi’   ‘~/tmp/scratch/RtmpMXKxDi’ ‘~/tmp/scratch/RtmpMqmgbN’   ‘~/tmp/scratch/RtmpMyXkO9’ ‘~/tmp/scratch/RtmpN6YTEU’   ‘~/tmp/scratch/RtmpOQTN35’ ‘~/tmp/scratch/RtmpPIYjbL’   ‘~/tmp/scratch/RtmpPNMwWs’ ‘~/tmp/scratch/RtmpPfW4f3’   ‘~/tmp/scratch/RtmpPni9ZJ’ ‘~/tmp/scratch/RtmpQF3eu5’   ‘~/tmp/scratch/RtmpR0fnNk’ ‘~/tmp/scratch/RtmpR6V7mn’   ‘~/tmp/scratch/RtmpRgPD0Y’ ‘~/tmp/scratch/RtmpSV3jJq’   ‘~/tmp/scratch/RtmpSdeP03’ ‘~/tmp/scratch/RtmpSum9tN’   ‘~/tmp/scratch/RtmpT6mx8v’ ‘~/tmp/scratch/RtmpTIQ5g1’   ‘~/tmp/scratch/RtmpTvLEVe’ ‘~/tmp/scratch/RtmpUIISIg’   ‘~/tmp/scratch/RtmpUd0rTS’ ‘~/tmp/scratch/RtmpUs0e6f’   ‘~/tmp/scratch/RtmpVRmqZ9’ ‘~/tmp/scratch/RtmpVVVA0v’   ‘~/tmp/scratch/RtmpVlMUhR’ ‘~/tmp/scratch/RtmpVrqJTI’   ‘~/tmp/scratch/RtmpW7WXUR’ ‘~/tmp/scratch/RtmpWLaEOn’   ‘~/tmp/scratch/RtmpWRPRit’ ‘~/tmp/scratch/RtmpWcnYkG’   ‘~/tmp/scratch/RtmpXP5yMq’ ‘~/tmp/scratch/RtmpXjlF6m’   ‘~/tmp/scratch/RtmpXrRoPC’ ‘~/tmp/scratch/RtmpXzaHnA’   ‘~/tmp/scratch/RtmpY2nL0y’ ‘~/tmp/scratch/RtmpYOk6YQ’   ‘~/tmp/scratch/RtmpYZF3hP’ ‘~/tmp/scratch/RtmpYr1332’   ‘~/tmp/scratch/RtmpZ3JxhL’ ‘~/tmp/scratch/RtmpZcttUz’   ‘~/tmp/scratch/Rtmpa3kVyJ’ ‘~/tmp/scratch/RtmpaARTs9’   ‘~/tmp/scratch/RtmpabVcJf’ ‘~/tmp/scratch/Rtmpag4y6K’   ‘~/tmp/scratch/RtmpbRUqyQ’ ‘~/tmp/scratch/Rtmpbduaro’   ‘~/tmp/scratch/RtmpbgeeFm’ ‘~/tmp/scratch/Rtmpc6IBpL’   ‘~/tmp/scratch/RtmpcOCWUq’ ‘~/tmp/scratch/Rtmpcdrr5w’   ‘~/tmp/scratch/Rtmpcwcbq0’ ‘~/tmp/scratch/RtmpdH0AOC’   ‘~/tmp/scratch/RtmpdLJwZp’ ‘~/tmp/scratch/Rtmpe0tvHC’   ‘~/tmp/scratch/Rtmpe8DDxf’ ‘~/tmp/scratch/RtmpeC4Bvc’   ‘~/tmp/scratch/RtmpeDLYwq’ ‘~/tmp/scratch/RtmpevprfV’   ‘~/tmp/scratch/RtmpfEOJ2X’ ‘~/tmp/scratch/Rtmpfb3aLH’   ‘~/tmp/scratch/RtmpfbFpoN’ ‘~/tmp/scratch/RtmpflMPTg’   ‘~/tmp/scratch/Rtmpfplftp’ ‘~/tmp/scratch/RtmpfxvfU9’   ‘~/tmp/scratch/RtmpfyEMvD’ ‘~/tmp/scratch/Rtmpg4QFvf’   ‘~/tmp/scratch/RtmpgCzfCk’ ‘~/tmp/scratch/RtmpgwQI5Q’   ‘~/tmp/scratch/RtmphRhhDY’ ‘~/tmp/scratch/RtmphSA6tn’   ‘~/tmp/scratch/RtmpiV0H57’ ‘~/tmp/scratch/Rtmpidn3np’   ‘~/tmp/scratch/Rtmpj2eb5c’ ‘~/tmp/scratch/Rtmpj4PNGa’   ‘~/tmp/scratch/RtmpjJiCXJ’ ‘~/tmp/scratch/Rtmpjlln8o’   ‘~/tmp/scratch/RtmpkKcR4Z’ ‘~/tmp/scratch/RtmpknEt3d’   ‘~/tmp/scratch/RtmpmZseGs’ ‘~/tmp/scratch/RtmpmbGPmi’   ‘~/tmp/scratch/RtmpnCmJaJ’ ‘~/tmp/scratch/Rtmposmy5P’   ‘~/tmp/scratch/RtmppnyXJE’ ‘~/tmp/scratch/Rtmprciz8v’   ‘~/tmp/scratch/RtmprmK20h’ ‘~/tmp/scratch/RtmpsKp364’   ‘~/tmp/scratch/RtmpsepT1z’ ‘~/tmp/scratch/RtmpssWlEA’   ‘~/tmp/scratch/RtmptMT7dR’ ‘~/tmp/scratch/RtmptVSAcm’   ‘~/tmp/scratch/RtmptwzqFW’ ‘~/tmp/scratch/RtmpuFmDjb’   ‘~/tmp/scratch/RtmpuMDm27’ ‘~/tmp/scratch/RtmpuTcTdh’   ‘~/tmp/scratch/RtmpurvErc’ ‘~/tmp/scratch/RtmpvMymFR’   ‘~/tmp/scratch/RtmpvSIWLz’ ‘~/tmp/scratch/RtmpvYTngn’   ‘~/tmp/scratch/Rtmpw7Q4vi’ ‘~/tmp/scratch/Rtmpw8JsV3’   ‘~/tmp/scratch/RtmpwqNRe6’ ‘~/tmp/scratch/RtmpxUf61l’   ‘~/tmp/scratch/RtmpyMJAJI’ ‘~/tmp/scratch/RtmpyhwcgR’   ‘~/tmp/scratch/RtmpytFQVS’ ‘~/tmp/scratch/RtmpzKQz0y’   ‘~/tmp/scratch/RtmpzZW6Wl’   ‘~/tmp/scratch/quarto-session7f2f752cb96dfd15’   ‘~/tmp/scratch/xvfb-run.4amiuc’ ‘~/tmp/scratch/xvfb-run.51IoZW’   ‘~/tmp/scratch/xvfb-run.5Rd4Wi’ ‘~/tmp/scratch/xvfb-run.79eJOp’   ‘~/tmp/scratch/xvfb-run.7XnVkX’ ‘~/tmp/scratch/xvfb-run.7uDi1z’   ‘~/tmp/scratch/xvfb-run.8HU9fN’ ‘~/tmp/scratch/xvfb-run.8jwib2’   ‘~/tmp/scratch/xvfb-run.B9GspJ’ ‘~/tmp/scratch/xvfb-run.Bo2l21’   ‘~/tmp/scratch/xvfb-run.BvbdjJ’ ‘~/tmp/scratch/xvfb-run.DNGZa9’   ‘~/tmp/scratch/xvfb-run.ELPSxJ’ ‘~/tmp/scratch/xvfb-run.EmzqwY’   ‘~/tmp/scratch/xvfb-run.GDhd8e’ ‘~/tmp/scratch/xvfb-run.GIE0w6’   ‘~/tmp/scratch/xvfb-run.GUoNdC’ ‘~/tmp/scratch/xvfb-run.JT5eI8’   ‘~/tmp/scratch/xvfb-run.K6Pi6l’ ‘~/tmp/scratch/xvfb-run.KRPedo’   ‘~/tmp/scratch/xvfb-run.Kmfsfm’ ‘~/tmp/scratch/xvfb-run.O7dUtd’   ‘~/tmp/scratch/xvfb-run.PiiGMN’ ‘~/tmp/scratch/xvfb-run.Pj3ONS’   ‘~/tmp/scratch/xvfb-run.PrUAxw’ ‘~/tmp/scratch/xvfb-run.RUkuE7’   ‘~/tmp/scratch/xvfb-run.RqjEHi’ ‘~/tmp/scratch/xvfb-run.SXXFFf’   ‘~/tmp/scratch/xvfb-run.Slicxu’ ‘~/tmp/scratch/xvfb-run.TP4UWP’   ‘~/tmp/scratch/xvfb-run.TQ0FVj’ ‘~/tmp/scratch/xvfb-run.UqS8mo’   ‘~/tmp/scratch/xvfb-run.UxhUzg’ ‘~/tmp/scratch/xvfb-run.VPHLle’   ‘~/tmp/scratch/xvfb-run.WQQITy’ ‘~/tmp/scratch/xvfb-run.WSHQ1X’   ‘~/tmp/scratch/xvfb-run.WWnDa3’ ‘~/tmp/scratch/xvfb-run.WjuI14’   ‘~/tmp/scratch/xvfb-run.X9kzmV’ ‘~/tmp/scratch/xvfb-run.XTDyaw’   ‘~/tmp/scratch/xvfb-run.Y137Md’ ‘~/tmp/scratch/xvfb-run.YTyFvg’   ‘~/tmp/scratch/xvfb-run.cBgome’ ‘~/tmp/scratch/xvfb-run.cdOJm5’   ‘~/tmp/scratch/xvfb-run.dBFIqw’ ‘~/tmp/scratch/xvfb-run.dNGZRG’   ‘~/tmp/scratch/xvfb-run.dd7f4r’ ‘~/tmp/scratch/xvfb-run.eB6K65’   ‘~/tmp/scratch/xvfb-run.f0iCkE’ ‘~/tmp/scratch/xvfb-run.fsCIB2’   ‘~/tmp/scratch/xvfb-run.ixNlfs’ ‘~/tmp/scratch/xvfb-run.j2PA6N’   ‘~/tmp/scratch/xvfb-run.jOUtUr’ ‘~/tmp/scratch/xvfb-run.jY7sWB’   ‘~/tmp/scratch/xvfb-run.l2bnbs’ ‘~/tmp/scratch/xvfb-run.ldr8wR’   ‘~/tmp/scratch/xvfb-run.mjC8Nu’ ‘~/tmp/scratch/xvfb-run.mnEkGQ’   ‘~/tmp/scratch/xvfb-run.nLaRsL’ ‘~/tmp/scratch/xvfb-run.oFZ6mP’   ‘~/tmp/scratch/xvfb-run.omoqw5’ ‘~/tmp/scratch/xvfb-run.ozOEf5’   ‘~/tmp/scratch/xvfb-run.pFtKKa’ ‘~/tmp/scratch/xvfb-run.qX0xTA’   ‘~/tmp/scratch/xvfb-run.sCCxOQ’ ‘~/tmp/scratch/xvfb-run.sMKxCt’   ‘~/tmp/scratch/xvfb-run.uprWcM’ ‘~/tmp/scratch/xvfb-run.v9FD4y’   ‘~/tmp/scratch/xvfb-run.xEWpiy’ ‘~/tmp/scratch/xvfb-run.xoMB00’   ‘~/tmp/scratch/xvfb-run.ycgchH’ ‘~/tmp/scratch/xvfb-run.yqBG2E’   ‘~/tmp/scratch/xvfb-run.yqoeZ4’ ‘~/.cache/quarto/sass/sass.kv-shm’   ‘~/.cache/quarto/sass/sass.kv-wal’
• DONE

Status: 1 NOTE