• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 18:17:28 UTC
• checking for file ‘taxodist/DESCRIPTION’ ... OK
• this is package ‘taxodist’ version ‘0.5.0’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘taxodist’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
• checking loading without being on the library search path ... [0s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [6s/7s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [1s/1s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [5s/7s] OK   Running ‘testthat.R’ [5s/6s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [4s/5s] OK
• checking PDF version of manual ... [5s/7s] OK
• checking HTML version of manual ... [1s/2s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0s2gtg’ ‘~/tmp/scratch/Rtmp0ucyMz’   ‘~/tmp/scratch/Rtmp1F9zq9’ ‘~/tmp/scratch/Rtmp1OBdiI’   ‘~/tmp/scratch/Rtmp1aF2tT’ ‘~/tmp/scratch/Rtmp2P9H6l’   ‘~/tmp/scratch/Rtmp2Su4Vv’ ‘~/tmp/scratch/Rtmp2sODaf’   ‘~/tmp/scratch/Rtmp3JIMEl’ ‘~/tmp/scratch/Rtmp3MZXUw’   ‘~/tmp/scratch/Rtmp3tw0pY’ ‘~/tmp/scratch/Rtmp3wl21F’   ‘~/tmp/scratch/Rtmp3xxOiJ’ ‘~/tmp/scratch/Rtmp4FMfUd’   ‘~/tmp/scratch/Rtmp4S6KLX’ ‘~/tmp/scratch/Rtmp4ayKVW’   ‘~/tmp/scratch/Rtmp4m1fZY’ ‘~/tmp/scratch/Rtmp4pDxKK’   ‘~/tmp/scratch/Rtmp5KiMEI’ ‘~/tmp/scratch/Rtmp6cdYLA’   ‘~/tmp/scratch/Rtmp6xwPXZ’ ‘~/tmp/scratch/Rtmp7VvV7z’   ‘~/tmp/scratch/Rtmp7dv1XP’ ‘~/tmp/scratch/Rtmp7mbWAe’   ‘~/tmp/scratch/Rtmp8U8OBM’ ‘~/tmp/scratch/Rtmp8sBoUm’   ‘~/tmp/scratch/Rtmp9599Uu’ ‘~/tmp/scratch/Rtmp9iC5yV’   ‘~/tmp/scratch/Rtmp9tm4Q0’ ‘~/tmp/scratch/RtmpACOJC0’   ‘~/tmp/scratch/RtmpAbWMyn’ ‘~/tmp/scratch/RtmpBPijjs’   ‘~/tmp/scratch/RtmpBo8gdJ’ ‘~/tmp/scratch/RtmpC8MkdP’   ‘~/tmp/scratch/RtmpCFUfuT’ ‘~/tmp/scratch/RtmpCJ0OPq’   ‘~/tmp/scratch/RtmpCN3KYh’ ‘~/tmp/scratch/RtmpCPQ30D’   ‘~/tmp/scratch/RtmpCklHku’ ‘~/tmp/scratch/RtmpDNR5fz’   ‘~/tmp/scratch/RtmpEDcgTx’ ‘~/tmp/scratch/RtmpENAPFF’   ‘~/tmp/scratch/RtmpEhRrUL’ ‘~/tmp/scratch/RtmpEpvGGQ’   ‘~/tmp/scratch/RtmpFV5hvU’ ‘~/tmp/scratch/RtmpGSlFIJ’   ‘~/tmp/scratch/RtmpGbRrkS’ ‘~/tmp/scratch/RtmpHrckS1’   ‘~/tmp/scratch/RtmpILdHIT’ ‘~/tmp/scratch/RtmpIz5xR8’   ‘~/tmp/scratch/RtmpJWiiVg’ ‘~/tmp/scratch/RtmpJghxn9’   ‘~/tmp/scratch/RtmpKvxjnp’ ‘~/tmp/scratch/RtmpKzwQ6v’   ‘~/tmp/scratch/RtmpMDuex1’ ‘~/tmp/scratch/RtmpMRtPkm’   ‘~/tmp/scratch/RtmpNDoEk3’ ‘~/tmp/scratch/RtmpNE7wP3’   ‘~/tmp/scratch/RtmpNToNS0’ ‘~/tmp/scratch/RtmpP5eADe’   ‘~/tmp/scratch/RtmpP7vY15’ ‘~/tmp/scratch/RtmpPZESUx’   ‘~/tmp/scratch/RtmpQF92cF’ ‘~/tmp/scratch/RtmpRUNRlQ’   ‘~/tmp/scratch/RtmpRta64k’ ‘~/tmp/scratch/RtmpSnqpPc’   ‘~/tmp/scratch/RtmpSuvU42’ ‘~/tmp/scratch/RtmpTD8tnC’   ‘~/tmp/scratch/RtmpTRLfVt’ ‘~/tmp/scratch/RtmpTVwNVI’   ‘~/tmp/scratch/RtmpTf6XwL’ ‘~/tmp/scratch/RtmpTgt0fK’   ‘~/tmp/scratch/RtmpU7bsKN’ ‘~/tmp/scratch/RtmpUN9nFG’   ‘~/tmp/scratch/RtmpV162Y5’ ‘~/tmp/scratch/RtmpV5PFvo’   ‘~/tmp/scratch/RtmpV9Btnl’ ‘~/tmp/scratch/RtmpVRoG2f’   ‘~/tmp/scratch/RtmpVs727O’ ‘~/tmp/scratch/RtmpVyAHCy’   ‘~/tmp/scratch/RtmpWKxa8P’ ‘~/tmp/scratch/RtmpWcdQV5’   ‘~/tmp/scratch/RtmpWg2C1V’ ‘~/tmp/scratch/RtmpXaiOFP’   ‘~/tmp/scratch/RtmpXmPHN0’ ‘~/tmp/scratch/RtmpYupLQs’   ‘~/tmp/scratch/RtmpZ23iir’ ‘~/tmp/scratch/Rtmpb4pw67’   ‘~/tmp/scratch/RtmpbWritZ’ ‘~/tmp/scratch/Rtmpbd3ANs’   ‘~/tmp/scratch/RtmpbgOnH4’ ‘~/tmp/scratch/RtmpblxJWT’   ‘~/tmp/scratch/RtmpcHhB4x’ ‘~/tmp/scratch/RtmpchqddC’   ‘~/tmp/scratch/RtmpcuIvgU’ ‘~/tmp/scratch/Rtmpd1Qx8G’   ‘~/tmp/scratch/RtmpdXmTUw’ ‘~/tmp/scratch/RtmpdYpg1g’   ‘~/tmp/scratch/Rtmpdnizjt’ ‘~/tmp/scratch/Rtmpdq4Va7’   ‘~/tmp/scratch/Rtmpdvpm4o’ ‘~/tmp/scratch/Rtmpf5JsFw’   ‘~/tmp/scratch/Rtmpf6eHAF’ ‘~/tmp/scratch/RtmpgHvxNN’   ‘~/tmp/scratch/RtmpgiIvby’ ‘~/tmp/scratch/Rtmph3vLR6’   ‘~/tmp/scratch/RtmphuSskx’ ‘~/tmp/scratch/Rtmpi0SnTA’   ‘~/tmp/scratch/Rtmpi7654O’ ‘~/tmp/scratch/Rtmpi8njGB’   ‘~/tmp/scratch/RtmpidzN1h’ ‘~/tmp/scratch/RtmpihF9ba’   ‘~/tmp/scratch/Rtmpj29yXH’ ‘~/tmp/scratch/RtmpkA6PSB’   ‘~/tmp/scratch/RtmpkWAc9P’ ‘~/tmp/scratch/RtmplFnJ2t’   ‘~/tmp/scratch/RtmpltMm4l’ ‘~/tmp/scratch/Rtmpm9jW1D’   ‘~/tmp/scratch/RtmpmFSgAX’ ‘~/tmp/scratch/RtmpmorQzS’   ‘~/tmp/scratch/Rtmpn9uscU’ ‘~/tmp/scratch/RtmpoXxZ16’   ‘~/tmp/scratch/RtmpocjPJU’ ‘~/tmp/scratch/RtmppT3eWu’   ‘~/tmp/scratch/RtmpqKD1sb’ ‘~/tmp/scratch/Rtmpqmby9A’   ‘~/tmp/scratch/RtmprMo4Hw’ ‘~/tmp/scratch/RtmpruFP2l’   ‘~/tmp/scratch/RtmprwKak1’ ‘~/tmp/scratch/Rtmprya7wT’   ‘~/tmp/scratch/RtmptCrLry’ ‘~/tmp/scratch/RtmptQGIct’   ‘~/tmp/scratch/RtmptewGuV’ ‘~/tmp/scratch/Rtmpu4btIa’   ‘~/tmp/scratch/Rtmpx7yNmu’ ‘~/tmp/scratch/RtmpxAGUF6’   ‘~/tmp/scratch/RtmpxktMay’ ‘~/tmp/scratch/RtmpyOvABc’   ‘~/tmp/scratch/RtmpyYEgsg’ ‘~/tmp/scratch/RtmpzC3uwp’   ‘~/tmp/scratch/RtmpzZ80rP’ ‘~/tmp/scratch/xvfb-run.3iZX7g’   ‘~/tmp/scratch/xvfb-run.6NZJkj’ ‘~/tmp/scratch/xvfb-run.7LHItE’   ‘~/tmp/scratch/xvfb-run.7X9EzG’ ‘~/tmp/scratch/xvfb-run.8Nw4uo’   ‘~/tmp/scratch/xvfb-run.Af7rNy’ ‘~/tmp/scratch/xvfb-run.AfRaIb’   ‘~/tmp/scratch/xvfb-run.BsnNr0’ ‘~/tmp/scratch/xvfb-run.CDJGyI’   ‘~/tmp/scratch/xvfb-run.CM7azE’ ‘~/tmp/scratch/xvfb-run.E6IGDf’   ‘~/tmp/scratch/xvfb-run.ErEZz7’ ‘~/tmp/scratch/xvfb-run.GRvkGh’   ‘~/tmp/scratch/xvfb-run.Gi0nhz’ ‘~/tmp/scratch/xvfb-run.HHJg8i’   ‘~/tmp/scratch/xvfb-run.HHQrh6’ ‘~/tmp/scratch/xvfb-run.KAK6dF’   ‘~/tmp/scratch/xvfb-run.PhRnnp’ ‘~/tmp/scratch/xvfb-run.RqxlOx’   ‘~/tmp/scratch/xvfb-run.SIiGLZ’ ‘~/tmp/scratch/xvfb-run.U38IXR’   ‘~/tmp/scratch/xvfb-run.UHyTsr’ ‘~/tmp/scratch/xvfb-run.UPxlZn’   ‘~/tmp/scratch/xvfb-run.VIaXIa’ ‘~/tmp/scratch/xvfb-run.Vvj0Fw’   ‘~/tmp/scratch/xvfb-run.X59QV5’ ‘~/tmp/scratch/xvfb-run.XhCEtT’   ‘~/tmp/scratch/xvfb-run.Z2hvlB’ ‘~/tmp/scratch/xvfb-run.cri19V’   ‘~/tmp/scratch/xvfb-run.cuOFOP’ ‘~/tmp/scratch/xvfb-run.d4CEBB’   ‘~/tmp/scratch/xvfb-run.dtWUOF’ ‘~/tmp/scratch/xvfb-run.ev3Av9’   ‘~/tmp/scratch/xvfb-run.gR1GTl’ ‘~/tmp/scratch/xvfb-run.hFTWAp’   ‘~/tmp/scratch/xvfb-run.hFh2nF’ ‘~/tmp/scratch/xvfb-run.hewYYU’   ‘~/tmp/scratch/xvfb-run.iUF3qo’ ‘~/tmp/scratch/xvfb-run.jyKYkW’   ‘~/tmp/scratch/xvfb-run.keiYWc’ ‘~/tmp/scratch/xvfb-run.knlLIj’   ‘~/tmp/scratch/xvfb-run.l3oEhf’ ‘~/tmp/scratch/xvfb-run.nwrsxG’   ‘~/tmp/scratch/xvfb-run.rQOcwS’ ‘~/tmp/scratch/xvfb-run.tLkOfd’   ‘~/tmp/scratch/xvfb-run.vxmawu’ ‘~/tmp/scratch/xvfb-run.wjsf8L’   ‘~/tmp/scratch/xvfb-run.y1i2Lp’ ‘~/tmp/scratch/xvfb-run.yZQKr4’
• DONE

Status: 1 NOTE