• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 18:17:49 UTC
• checking for file ‘taxodist/DESCRIPTION’ ... OK
• this is package ‘taxodist’ version ‘0.5.0’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘taxodist’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
• checking loading without being on the library search path ... [0s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [6s/7s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [1s/1s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [5s/7s] OK   Running ‘testthat.R’ [5s/6s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [4s/5s] OK
• checking PDF version of manual ... [5s/7s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp1mfYcP’ ‘~/tmp/scratch/Rtmp2VnBTe’   ‘~/tmp/scratch/Rtmp2nyhLq’ ‘~/tmp/scratch/Rtmp3KtMFL’   ‘~/tmp/scratch/Rtmp3sircS’ ‘~/tmp/scratch/Rtmp4mIZjD’   ‘~/tmp/scratch/Rtmp5PljjQ’ ‘~/tmp/scratch/Rtmp6ModTb’   ‘~/tmp/scratch/Rtmp6RHzaH’ ‘~/tmp/scratch/Rtmp7Hn7vv’   ‘~/tmp/scratch/Rtmp8An1V2’ ‘~/tmp/scratch/Rtmp8KQh1g’   ‘~/tmp/scratch/Rtmp8TPimU’ ‘~/tmp/scratch/Rtmp8cgjMb’   ‘~/tmp/scratch/Rtmp9iCM0l’ ‘~/tmp/scratch/Rtmp9tRrXb’   ‘~/tmp/scratch/RtmpBdmF8Y’ ‘~/tmp/scratch/RtmpBmiOJy’   ‘~/tmp/scratch/RtmpCgMrgY’ ‘~/tmp/scratch/RtmpD5Z5Fu’   ‘~/tmp/scratch/RtmpDb1CP6’ ‘~/tmp/scratch/RtmpDg0sbi’   ‘~/tmp/scratch/RtmpFFOXnX’ ‘~/tmp/scratch/RtmpGYMCEb’   ‘~/tmp/scratch/RtmpH97C0R’ ‘~/tmp/scratch/RtmpHHeAuY’   ‘~/tmp/scratch/RtmpHfnK36’ ‘~/tmp/scratch/RtmpIDs9Ur’   ‘~/tmp/scratch/RtmpIQEAy2’ ‘~/tmp/scratch/RtmpIQx2yS’   ‘~/tmp/scratch/RtmpIbhzAo’ ‘~/tmp/scratch/RtmpJZJtXT’   ‘~/tmp/scratch/RtmpJgU7Fq’ ‘~/tmp/scratch/RtmpKSAcXk’   ‘~/tmp/scratch/RtmpLQFC7X’ ‘~/tmp/scratch/RtmpLYGteC’   ‘~/tmp/scratch/RtmpLjpy8g’ ‘~/tmp/scratch/RtmpLnYF2J’   ‘~/tmp/scratch/RtmpMWEr2L’ ‘~/tmp/scratch/RtmpMfLUli’   ‘~/tmp/scratch/RtmpMgz7w2’ ‘~/tmp/scratch/RtmpMnHGKx’   ‘~/tmp/scratch/RtmpNNK9AW’ ‘~/tmp/scratch/RtmpNQdiNE’   ‘~/tmp/scratch/RtmpNagEjP’ ‘~/tmp/scratch/RtmpNvDeF3’   ‘~/tmp/scratch/RtmpO2Gwyg’ ‘~/tmp/scratch/RtmpO3bNU9’   ‘~/tmp/scratch/RtmpODhheh’ ‘~/tmp/scratch/RtmpOTNWyV’   ‘~/tmp/scratch/RtmpQHqZDe’ ‘~/tmp/scratch/RtmpQVfJyp’   ‘~/tmp/scratch/RtmpRxRlzN’ ‘~/tmp/scratch/RtmpT0PL8m’   ‘~/tmp/scratch/RtmpTDkP3N’ ‘~/tmp/scratch/RtmpTI9UNA’   ‘~/tmp/scratch/RtmpUtss9i’ ‘~/tmp/scratch/RtmpVHocZ7’   ‘~/tmp/scratch/RtmpVT9LLb’ ‘~/tmp/scratch/RtmpVvSzwC’   ‘~/tmp/scratch/RtmpWB3cPI’ ‘~/tmp/scratch/RtmpWQcYak’   ‘~/tmp/scratch/RtmpWuLWO1’ ‘~/tmp/scratch/RtmpWwLHXR’   ‘~/tmp/scratch/RtmpXN5WZa’ ‘~/tmp/scratch/RtmpXY4qz2’   ‘~/tmp/scratch/RtmpXlWyme’ ‘~/tmp/scratch/RtmpYSUNmY’   ‘~/tmp/scratch/RtmpYTt9K3’ ‘~/tmp/scratch/RtmpYzr0Au’   ‘~/tmp/scratch/RtmpZsu2Pa’ ‘~/tmp/scratch/RtmpaMm82a’   ‘~/tmp/scratch/RtmpaYSu4C’ ‘~/tmp/scratch/Rtmpaxg4I7’   ‘~/tmp/scratch/RtmpbIXtun’ ‘~/tmp/scratch/RtmpbdjVs5’   ‘~/tmp/scratch/Rtmpc3VlHO’ ‘~/tmp/scratch/RtmpcsvqNE’   ‘~/tmp/scratch/RtmpdOX0EW’ ‘~/tmp/scratch/RtmpdlB1YD’   ‘~/tmp/scratch/RtmpeXC11A’ ‘~/tmp/scratch/RtmpfVZvTI’   ‘~/tmp/scratch/RtmpfdeLyi’ ‘~/tmp/scratch/RtmpgDtNdM’   ‘~/tmp/scratch/RtmpgQ5JW4’ ‘~/tmp/scratch/Rtmpgdeq7P’   ‘~/tmp/scratch/Rtmpgmjb57’ ‘~/tmp/scratch/Rtmphp9DzY’   ‘~/tmp/scratch/Rtmpi1IIbA’ ‘~/tmp/scratch/RtmpiqZBVp’   ‘~/tmp/scratch/RtmpivngW4’ ‘~/tmp/scratch/Rtmpj3Lff3’   ‘~/tmp/scratch/RtmpjALQAx’ ‘~/tmp/scratch/RtmpjAfbQp’   ‘~/tmp/scratch/Rtmpjiot6n’ ‘~/tmp/scratch/Rtmpk4Nj9x’   ‘~/tmp/scratch/RtmpkPadDD’ ‘~/tmp/scratch/Rtmpkh27cQ’   ‘~/tmp/scratch/Rtmpmhuohn’ ‘~/tmp/scratch/RtmpnReCjq’   ‘~/tmp/scratch/RtmpnXzaAb’ ‘~/tmp/scratch/Rtmpnb1mgA’   ‘~/tmp/scratch/RtmpoHVffM’ ‘~/tmp/scratch/RtmporTTUE’   ‘~/tmp/scratch/Rtmpp0LRVu’ ‘~/tmp/scratch/Rtmpp5pgK7’   ‘~/tmp/scratch/RtmpqA6yUr’ ‘~/tmp/scratch/RtmpqYaQzA’   ‘~/tmp/scratch/Rtmpr7y2P6’ ‘~/tmp/scratch/RtmprDyfAo’   ‘~/tmp/scratch/RtmprcgUK6’ ‘~/tmp/scratch/RtmprdsUmn’   ‘~/tmp/scratch/Rtmprie8dk’ ‘~/tmp/scratch/RtmprxuGlr’   ‘~/tmp/scratch/Rtmps20OO8’ ‘~/tmp/scratch/RtmpsaL6ED’   ‘~/tmp/scratch/Rtmpu1Kuua’ ‘~/tmp/scratch/RtmpuAY2tz’   ‘~/tmp/scratch/RtmpufdEJM’ ‘~/tmp/scratch/RtmpuwbRDL’   ‘~/tmp/scratch/RtmpvAW7Rf’ ‘~/tmp/scratch/RtmpvYOpST’   ‘~/tmp/scratch/Rtmpw3kPw2’ ‘~/tmp/scratch/RtmpwidqoL’   ‘~/tmp/scratch/Rtmpz2XnRy’ ‘~/tmp/scratch/RtmpzBIqoS’   ‘~/tmp/scratch/RtmpzGqeax’ ‘~/tmp/scratch/Rtmpzo5YxW’   ‘~/tmp/scratch/Rtmpzuh65L’ ‘~/tmp/scratch/xvfb-run.049qgJ’   ‘~/tmp/scratch/xvfb-run.0UOFnz’ ‘~/tmp/scratch/xvfb-run.0ecsEY’   ‘~/tmp/scratch/xvfb-run.1kzRfG’ ‘~/tmp/scratch/xvfb-run.1mnYg2’   ‘~/tmp/scratch/xvfb-run.2dez4B’ ‘~/tmp/scratch/xvfb-run.35Od6Q’   ‘~/tmp/scratch/xvfb-run.4mIiuZ’ ‘~/tmp/scratch/xvfb-run.5xpsvy’   ‘~/tmp/scratch/xvfb-run.6qEkRH’ ‘~/tmp/scratch/xvfb-run.BRlmUO’   ‘~/tmp/scratch/xvfb-run.C1qPYl’ ‘~/tmp/scratch/xvfb-run.DTROKp’   ‘~/tmp/scratch/xvfb-run.F41XXt’ ‘~/tmp/scratch/xvfb-run.L2uQwq’   ‘~/tmp/scratch/xvfb-run.LFaKwI’ ‘~/tmp/scratch/xvfb-run.M0DRIT’   ‘~/tmp/scratch/xvfb-run.MlQaZI’ ‘~/tmp/scratch/xvfb-run.NkzLq7’   ‘~/tmp/scratch/xvfb-run.O7m7Og’ ‘~/tmp/scratch/xvfb-run.OL5AA9’   ‘~/tmp/scratch/xvfb-run.Pk5I1q’ ‘~/tmp/scratch/xvfb-run.PlM2GO’   ‘~/tmp/scratch/xvfb-run.QQMAUa’ ‘~/tmp/scratch/xvfb-run.TGrfDD’   ‘~/tmp/scratch/xvfb-run.VvI5M1’ ‘~/tmp/scratch/xvfb-run.XwLqs1’   ‘~/tmp/scratch/xvfb-run.YZbZaJ’ ‘~/tmp/scratch/xvfb-run.aOSh4O’   ‘~/tmp/scratch/xvfb-run.cqWFkd’ ‘~/tmp/scratch/xvfb-run.gRblEy’   ‘~/tmp/scratch/xvfb-run.giTP6R’ ‘~/tmp/scratch/xvfb-run.jT8pzJ’   ‘~/tmp/scratch/xvfb-run.lu5cPs’ ‘~/tmp/scratch/xvfb-run.mabUho’   ‘~/tmp/scratch/xvfb-run.meoTFh’ ‘~/tmp/scratch/xvfb-run.mzMu0d’   ‘~/tmp/scratch/xvfb-run.nACloQ’ ‘~/tmp/scratch/xvfb-run.nWNw0p’   ‘~/tmp/scratch/xvfb-run.pyZgH0’ ‘~/tmp/scratch/xvfb-run.q66x3n’   ‘~/tmp/scratch/xvfb-run.r7YEAc’ ‘~/tmp/scratch/xvfb-run.rXQLp8’   ‘~/tmp/scratch/xvfb-run.u6ebUx’ ‘~/tmp/scratch/xvfb-run.vcuPu9’   ‘~/tmp/scratch/xvfb-run.yjnCt4’ ‘~/tmp/scratch/xvfb-run.ypELDE’
• DONE

Status: 1 NOTE