- using R Under development (unstable) (2026-07-30 r90327)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-16 (Debian 16.1.0-3) 16.1.0
GNU Fortran (Debian 16.1.0-3) 16.1.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
* current time: 2026-07-31 18:13:04 UTC
- checking for file ‘survminer/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘survminer’ version ‘0.5.2’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [3s/4s] OK
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘survminer’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [2s/3s] OK
- checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
- checking whether the package can be unloaded cleanly ... [2s/3s] OK
- checking whether the namespace can be loaded with stated dependencies ... [2s/3s] OK
- checking whether the namespace can be unloaded cleanly ... [2s/3s] OK
- checking loading without being on the library search path ... [2s/3s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [17s/19s] OK
- checking Rd files ... [0s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... NOTE
Rd files without \usage:
‘ggsurvplot_arguments.Rd’
\arguments should not be documented without \usage.
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [52s/58s] OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
ggsurvplot_group_by 5.209 0.004 5.570
ggsurvplot 4.449 0.033 5.379
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [8s/8s] OK
Running ‘testthat.R’ [7s/8s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [38s/44s] OK
- checking PDF version of manual ... [6s/9s] OK
- checking HTML version of manual ... [2s/2s] OK
- checking for non-standard things in the check directory ... OK
- checking for new files in some other directories ... NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp07i9IU’ ‘~/tmp/scratch/Rtmp0DXEcv’
‘~/tmp/scratch/Rtmp0Hboh7’ ‘~/tmp/scratch/Rtmp0n143Y’
‘~/tmp/scratch/Rtmp0paNi8’ ‘~/tmp/scratch/Rtmp1Bb5TT’
‘~/tmp/scratch/Rtmp1TUjSr’ ‘~/tmp/scratch/Rtmp1eiiKm’
‘~/tmp/scratch/Rtmp27VZmy’ ‘~/tmp/scratch/Rtmp3bSlCX’
‘~/tmp/scratch/Rtmp3hHojK’ ‘~/tmp/scratch/Rtmp3hjA4s’
‘~/tmp/scratch/Rtmp4QsxfW’ ‘~/tmp/scratch/Rtmp4TnC9Z’
‘~/tmp/scratch/Rtmp4ZlSX3’ ‘~/tmp/scratch/Rtmp67vUcN’
‘~/tmp/scratch/Rtmp6sa6PS’ ‘~/tmp/scratch/Rtmp7oMBEi’
‘~/tmp/scratch/Rtmp7r8wZA’ ‘~/tmp/scratch/Rtmp8bimUU’
‘~/tmp/scratch/Rtmp8hNYEV’ ‘~/tmp/scratch/Rtmp9DccFW’
‘~/tmp/scratch/Rtmp9aO5PV’ ‘~/tmp/scratch/Rtmp9wWduL’
‘~/tmp/scratch/RtmpAAtIMa’ ‘~/tmp/scratch/RtmpAPnQxb’
‘~/tmp/scratch/RtmpAVSGJs’ ‘~/tmp/scratch/RtmpAegOAL’
‘~/tmp/scratch/RtmpAvwvgR’ ‘~/tmp/scratch/RtmpB0pJNT’
‘~/tmp/scratch/RtmpBpnv2Q’ ‘~/tmp/scratch/RtmpBq1T0G’
‘~/tmp/scratch/RtmpC6aBZS’ ‘~/tmp/scratch/RtmpCbm8vU’
‘~/tmp/scratch/RtmpD2N20e’ ‘~/tmp/scratch/RtmpDGhjPZ’
‘~/tmp/scratch/RtmpDTAwsp’ ‘~/tmp/scratch/RtmpDUJ2oo’
‘~/tmp/scratch/RtmpEEG6hj’ ‘~/tmp/scratch/RtmpEJgC8n’
‘~/tmp/scratch/RtmpFzUMQ4’ ‘~/tmp/scratch/RtmpGROqj5’
‘~/tmp/scratch/RtmpGs8WEz’ ‘~/tmp/scratch/RtmpHNHguN’
‘~/tmp/scratch/RtmpHfTrs7’ ‘~/tmp/scratch/RtmpHlNyoI’
‘~/tmp/scratch/RtmpHnM28P’ ‘~/tmp/scratch/RtmpITJlJX’
‘~/tmp/scratch/RtmpJCCkLg’ ‘~/tmp/scratch/RtmpKdVT7z’
‘~/tmp/scratch/RtmpKhUrcS’ ‘~/tmp/scratch/RtmpKluZXW’
‘~/tmp/scratch/RtmpKy40DL’ ‘~/tmp/scratch/RtmpLDHIS0’
‘~/tmp/scratch/RtmpLEWdDs’ ‘~/tmp/scratch/RtmpLNrveP’
‘~/tmp/scratch/RtmpLt8exf’ ‘~/tmp/scratch/RtmpMEKwYz’
‘~/tmp/scratch/RtmpMPBC6k’ ‘~/tmp/scratch/RtmpMnzzV6’
‘~/tmp/scratch/RtmpMwSNQy’ ‘~/tmp/scratch/RtmpNrZdx5’
‘~/tmp/scratch/RtmpOO1jG2’ ‘~/tmp/scratch/RtmpOaOdYa’
‘~/tmp/scratch/RtmpOcI3zQ’ ‘~/tmp/scratch/RtmpOhLvsY’
‘~/tmp/scratch/RtmpP1NT0m’ ‘~/tmp/scratch/RtmpPE38RB’
‘~/tmp/scratch/RtmpPEVROk’ ‘~/tmp/scratch/RtmpPNdsG9’
‘~/tmp/scratch/RtmpPwcwUD’ ‘~/tmp/scratch/RtmpQEKr7B’
‘~/tmp/scratch/RtmpQq6dxL’ ‘~/tmp/scratch/RtmpR1Aots’
‘~/tmp/scratch/RtmpRBmpmf’ ‘~/tmp/scratch/RtmpRe1XK8’
‘~/tmp/scratch/RtmpRexQ0Q’ ‘~/tmp/scratch/RtmpRrnr55’
‘~/tmp/scratch/RtmpS5F4YF’ ‘~/tmp/scratch/RtmpSCFQS9’
‘~/tmp/scratch/RtmpSJK2oz’ ‘~/tmp/scratch/RtmpSliJDX’
‘~/tmp/scratch/RtmpTYXOAl’ ‘~/tmp/scratch/RtmpTeONhz’
‘~/tmp/scratch/RtmpUqWj2s’ ‘~/tmp/scratch/RtmpVmmvqA’
‘~/tmp/scratch/RtmpVn5vMA’ ‘~/tmp/scratch/RtmpWDwbD7’
‘~/tmp/scratch/RtmpXlMIU7’ ‘~/tmp/scratch/RtmpY67NKo’
‘~/tmp/scratch/RtmpYTQaED’ ‘~/tmp/scratch/RtmpYw1gIz’
‘~/tmp/scratch/RtmpZGQvim’ ‘~/tmp/scratch/RtmpaVhK5f’
‘~/tmp/scratch/RtmpbPZcmO’ ‘~/tmp/scratch/Rtmpbo7D5v’
‘~/tmp/scratch/Rtmpbor4uV’ ‘~/tmp/scratch/Rtmpcnbdnu’
‘~/tmp/scratch/RtmpctoGH0’ ‘~/tmp/scratch/RtmpcxhZu8’
‘~/tmp/scratch/RtmpduNzGt’ ‘~/tmp/scratch/RtmpdybNyt’
‘~/tmp/scratch/Rtmpe6IaZn’ ‘~/tmp/scratch/RtmpeBhZp8’
‘~/tmp/scratch/RtmpeykceK’ ‘~/tmp/scratch/RtmpfAHQZm’
‘~/tmp/scratch/RtmpfvBWBV’ ‘~/tmp/scratch/RtmpfzVuGl’
‘~/tmp/scratch/RtmpgHzCzF’ ‘~/tmp/scratch/RtmpgI7tOJ’
‘~/tmp/scratch/RtmpgS9Dlg’ ‘~/tmp/scratch/RtmpgXuz2Z’
‘~/tmp/scratch/RtmpgfcUKF’ ‘~/tmp/scratch/RtmpgkpPmh’
‘~/tmp/scratch/RtmpiLJ3B0’ ‘~/tmp/scratch/RtmpiNbkAG’
‘~/tmp/scratch/RtmpiPdLig’ ‘~/tmp/scratch/RtmpiUT9ic’
‘~/tmp/scratch/RtmpiWUUie’ ‘~/tmp/scratch/RtmpieVIxn’
‘~/tmp/scratch/RtmpimasYI’ ‘~/tmp/scratch/RtmpivVUhC’
‘~/tmp/scratch/RtmpjWpZY8’ ‘~/tmp/scratch/Rtmpjb27KR’
‘~/tmp/scratch/RtmpkRLJLw’ ‘~/tmp/scratch/RtmpkcaUNc’
‘~/tmp/scratch/RtmplWRa5K’ ‘~/tmp/scratch/RtmploMDtm’
‘~/tmp/scratch/RtmpmHWEM7’ ‘~/tmp/scratch/RtmpmJbhW5’
‘~/tmp/scratch/RtmpmkMwpC’ ‘~/tmp/scratch/Rtmpmu9nnI’
‘~/tmp/scratch/RtmpoZAmF3’ ‘~/tmp/scratch/RtmpolTYdI’
‘~/tmp/scratch/RtmppKUvCB’ ‘~/tmp/scratch/RtmppKvFtT’
‘~/tmp/scratch/Rtmpphae0m’ ‘~/tmp/scratch/Rtmpqgfn5o’
‘~/tmp/scratch/Rtmpqq1LED’ ‘~/tmp/scratch/RtmpsCNvPH’
‘~/tmp/scratch/RtmpsKiS7j’ ‘~/tmp/scratch/RtmpsT50v2’
‘~/tmp/scratch/RtmpsZNnrf’ ‘~/tmp/scratch/RtmpsbKLpu’
‘~/tmp/scratch/RtmptNKpXu’ ‘~/tmp/scratch/RtmptQqXOv’
‘~/tmp/scratch/RtmptSEHdh’ ‘~/tmp/scratch/Rtmptntfex’
‘~/tmp/scratch/RtmpurfMwt’ ‘~/tmp/scratch/Rtmpv3vh3C’
‘~/tmp/scratch/RtmpvTBdmc’ ‘~/tmp/scratch/RtmpvaWk4C’
‘~/tmp/scratch/Rtmpwogkd0’ ‘~/tmp/scratch/RtmpxPBe03’
‘~/tmp/scratch/RtmpxYXPmq’ ‘~/tmp/scratch/RtmpxjB9ZO’
‘~/tmp/scratch/Rtmpxq0KZ1’ ‘~/tmp/scratch/RtmpyKKa49’
‘~/tmp/scratch/RtmpzAP3H2’ ‘~/tmp/scratch/xvfb-run.0kF08c’
‘~/tmp/scratch/xvfb-run.1XKaWi’ ‘~/tmp/scratch/xvfb-run.1yJe4e’
‘~/tmp/scratch/xvfb-run.2xhM6F’ ‘~/tmp/scratch/xvfb-run.31XFRu’
‘~/tmp/scratch/xvfb-run.3s3hkL’ ‘~/tmp/scratch/xvfb-run.6wuRUX’
‘~/tmp/scratch/xvfb-run.76mMN5’ ‘~/tmp/scratch/xvfb-run.8IdM6N’
‘~/tmp/scratch/xvfb-run.BZu5FZ’ ‘~/tmp/scratch/xvfb-run.BjhGmP’
‘~/tmp/scratch/xvfb-run.CL0tyA’ ‘~/tmp/scratch/xvfb-run.CMnZga’
‘~/tmp/scratch/xvfb-run.Cf358J’ ‘~/tmp/scratch/xvfb-run.DIjjRz’
‘~/tmp/scratch/xvfb-run.EIerSA’ ‘~/tmp/scratch/xvfb-run.EfKd9Y’
‘~/tmp/scratch/xvfb-run.FGnvcP’ ‘~/tmp/scratch/xvfb-run.FSBa5j’
‘~/tmp/scratch/xvfb-run.IYF9I5’ ‘~/tmp/scratch/xvfb-run.JDjyhg’
‘~/tmp/scratch/xvfb-run.JHySi8’ ‘~/tmp/scratch/xvfb-run.LQxygy’
‘~/tmp/scratch/xvfb-run.LfziRF’ ‘~/tmp/scratch/xvfb-run.RLfUBY’
‘~/tmp/scratch/xvfb-run.SLgx0N’ ‘~/tmp/scratch/xvfb-run.VF89ZI’
‘~/tmp/scratch/xvfb-run.Yi68XM’ ‘~/tmp/scratch/xvfb-run.YuPdVG’
‘~/tmp/scratch/xvfb-run.Z7Poor’ ‘~/tmp/scratch/xvfb-run.aCBl9E’
‘~/tmp/scratch/xvfb-run.aNg0od’ ‘~/tmp/scratch/xvfb-run.bLy8Ce’
‘~/tmp/scratch/xvfb-run.cB3mlp’ ‘~/tmp/scratch/xvfb-run.d1YYRM’
‘~/tmp/scratch/xvfb-run.dmi0XK’ ‘~/tmp/scratch/xvfb-run.eTGIYB’
‘~/tmp/scratch/xvfb-run.eboUGm’ ‘~/tmp/scratch/xvfb-run.fFn6qJ’
‘~/tmp/scratch/xvfb-run.hZaZge’ ‘~/tmp/scratch/xvfb-run.hhQQYv’
‘~/tmp/scratch/xvfb-run.hmnwTE’ ‘~/tmp/scratch/xvfb-run.iqLnvt’
‘~/tmp/scratch/xvfb-run.irChJY’ ‘~/tmp/scratch/xvfb-run.jV8NA5’
‘~/tmp/scratch/xvfb-run.kLbB7F’ ‘~/tmp/scratch/xvfb-run.kakikS’
‘~/tmp/scratch/xvfb-run.lVktR8’ ‘~/tmp/scratch/xvfb-run.mBOWOA’
‘~/tmp/scratch/xvfb-run.mH1ZEB’ ‘~/tmp/scratch/xvfb-run.oYCIQb’
‘~/tmp/scratch/xvfb-run.pAieiM’ ‘~/tmp/scratch/xvfb-run.rICPje’
‘~/tmp/scratch/xvfb-run.tDtTyc’ ‘~/tmp/scratch/xvfb-run.tPLaUJ’
‘~/tmp/scratch/xvfb-run.tUTpmL’ ‘~/tmp/scratch/xvfb-run.tXx3eo’
‘~/tmp/scratch/xvfb-run.trUxgw’ ‘~/tmp/scratch/xvfb-run.uicOGa’
‘~/tmp/scratch/xvfb-run.vp2oiF’ ‘~/tmp/scratch/xvfb-run.w8l7qK’
‘~/tmp/scratch/xvfb-run.x3Q7vN’ ‘~/tmp/scratch/xvfb-run.ypHhua’
‘~/tmp/scratch/xvfb-run.zC5lOl’ ‘~/tmp/scratch/xvfb-run.zpWhcV’
- DONE
Status: 2 NOTEs