* using log directory ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/strvalidator.Rcheck’ * using R Under development (unstable) (2025-07-14 r88410) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc-14 (Debian 14.2.0-19) 14.2.0 GNU Fortran (Debian 14.2.0-19) 14.2.0 * running under: Debian GNU/Linux 13 (trixie) * using session charset: UTF-8 * checking for file ‘strvalidator/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘strvalidator’ version ‘2.4.1’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [1s/2s] NOTE Maintainer: ‘Oskar Hansson ’ No Authors@R field in DESCRIPTION. Please add one, modifying Authors@R: person(given = "Oskar", family = "Hansson", role = c("aut", "cre"), email = "oskhan@ous-hf.no") as necessary. * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘strvalidator’ can be installed ... OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-gcc/strvalidator-00install.html' for details. * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [3s/3s] OK * checking whether the package can be loaded with stated dependencies ... [2s/3s] OK * checking whether the package can be unloaded cleanly ... [2s/3s] OK * checking whether the namespace can be loaded with stated dependencies ... [2s/3s] OK * checking whether the namespace can be unloaded cleanly ... [3s/3s] OK * checking loading without being on the library search path ... [3s/3s] OK * checking whether startup messages can be suppressed ... [3s/3s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [94s/114s] OK * checking Rd files ... [1s/1s] NOTE checkRd: (-1) calculateStatistics.Rd:22: Lost braces; missing escapes or markup? 22 | \item{quant}{numeric quantile to calculate {0,1}, default 0.95.} | ^ * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: calculateAllele.Rd: data.table calculateSpike.Rd: data.table combine_gui.Rd: rbind.fill editData_gui.Rd: gdf, gtable ggsave_gui.Rd: ggsave plotDistribution_gui.Rd: geom_density plotGroups_gui.Rd: stat_ecdf Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [5s/6s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [47s/55s] OK Running ‘testthat.R’ [47s/55s] * checking PDF version of manual ... [8s/10s] OK * checking HTML version of manual ... [4s/6s] OK * checking for non-standard things in the check directory ... OK * DONE Status: 3 NOTEs