Install log for 'strollur'

* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘strollur’ ...
** this is package ‘strollur’ version ‘0.1.3’
** package ‘strollur’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-16 (Debian 16.1.0-2) 16.1.0’
make[1]: Entering directory '/tmp/RtmpZBtK1N/R.INSTALL21bbb070c6607a/strollur/src'
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcereal/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcereal/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c abundtable.cpp -o abundtable.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcereal/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c bintable.cpp -o bintable.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcereal/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c dataset.cpp -o dataset.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcereal/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c phylotree.cpp -o phylotree.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcereal/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c rcpp_dataset.cpp -o rcpp_dataset.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcereal/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c rcpp_xint_xdev_functions.cpp -o rcpp_xint_xdev_functions.o
rcpp_xint_xdev_functions.cpp: In function ‘Rcpp::Environment xdev_set_abundances(const Rcpp::Environment&, const std::vector<std::__cxx11::basic_string<char> >&, const std::vector<std::vector<float> >&, const std::string&)’:
rcpp_xint_xdev_functions.cpp:1148:39: warning: comparison of integer expressions of different signedness: ‘std::vector<float>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 1148 |              if (abundances[i].size() != numSamples) {
      |                  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcereal/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c report.cpp -o report.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcereal/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c seqreport.cpp -o seqreport.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cli/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcereal/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c utils.cpp -o utils.o
g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o strollur.so RcppExports.o abundtable.o bintable.o dataset.o phylotree.o rcpp_dataset.o rcpp_xint_xdev_functions.o report.o seqreport.o utils.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpZBtK1N/R.INSTALL21bbb070c6607a/strollur/src'
make[1]: Entering directory '/tmp/RtmpZBtK1N/R.INSTALL21bbb070c6607a/strollur/src'
make[1]: Leaving directory '/tmp/RtmpZBtK1N/R.INSTALL21bbb070c6607a/strollur/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-strollur/00new/strollur/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (strollur)