- using R Under development (unstable) (2026-06-05 r90111)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-16 (Debian 16.1.0-1) 16.1.0
GNU Fortran (Debian 16.1.0-1) 16.1.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
* current time: 2026-06-06 17:05:05 UTC
- checking for file ‘stepR/DESCRIPTION’ ... OK
- this is package ‘stepR’ version ‘2.1-11’
- checking CRAN incoming feasibility ... [1s/1s] OK
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘stepR’ can be installed ... OK
See the install log for details.
- used C compiler: ‘gcc-16 (Debian 16.1.0-1) 16.1.0’
- used C++ compiler: ‘g++-16 (Debian 16.1.0-1) 16.1.0’
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/1s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
- checking loading without being on the library search path ... [0s/1s] OK
- checking whether startup messages can be suppressed ... [0s/0s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [14s/17s] OK
- checking Rd files ... [0s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking R/sysdata.rda ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [11s/14s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [110s/133s] ERROR
Running ‘tests.R’ [1s/2s]
Running ‘testthat.R’ [108s/131s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(stepR)
Successfully loaded stepR package version 2.1-11.
Several new functions are added in version 2.0-0. Some older functions are deprecated (still working) and may be defunct in a later version. Please read the documentation for more details.
>
> savePathRcache <- R.cache::getCacheRootPath()
> R.cache::setCacheRootPath(path = file.path(R.cache::getCacheRootPath(), "test"))
>
> tryCatch(
+ test_check("stepR"),
+ finally = {
+ unlink(R.cache::getCacheRootPath(), force = TRUE, recursive = TRUE)
+ R.cache::setCacheRootPath(savePathRcache)
+ }
+ )
Saving _problems/test-computeBounds-1413.R
[ FAIL 1 | WARN 17 | SKIP 23 | PASS 23706 ]
══ Skipped tests (23) ══════════════════════════════════════════════════════════
• On CRAN (23): 'test-computeStat.R:1389:3', 'test-computeStat.R:1508:3',
'test-critVal.R:2841:3', 'test-critVal.R:3118:3', 'test-critVal.R:3318:3',
'test-critVal.R:3376:3', 'test-critVal.R:3504:3',
'test-monteCarloSimulation.R:517:3', 'test-monteCarloSimulation.R:530:3',
'test-monteCarloSimulation.R:549:3', 'test-monteCarloSimulation.R:566:3',
'test-monteCarloSimulation.R:582:3', 'test-monteCarloSimulation.R:590:3',
'test-monteCarloSimulation.R:605:3', 'test-monteCarloSimulation.R:655:3',
'test-monteCarloSimulation.R:690:3', 'test-monteCarloSimulation.R:698:3',
'test-monteCarloSimulation.R:706:3', 'test-monteCarloSimulation.R:818:3',
'test-monteCarloSimulation.R:959:3', 'test-monteCarloSimulation.R:1020:3',
'test-monteCarloSimulation.R:1078:3', 'test-monteCarloSimulation.R:1205:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-computeBounds.R:1413:3'): argument q is tested and works for family 'jsmurf' ──
Error in `file(pathname, open = "wb")`: cannot open the connection
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test-computeBounds.R:1413:3
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─stepR::computeBounds(testy, family = "jsmurf", filter = testfilter)
7. └─stepR (local) .RemoveAdditionalArgsCV(...)
8. └─stepR:::.critVal(...)
9. └─stepR:::.getVectorStat(...)
10. └─stepR:::.getStat(...)
11. └─stepR:::.saveMatrix(stat = stat, options = options, n = data$n)
12. └─stepR:::.saveRcache(...)
13. ├─R.cache::saveCache(stat, key = key, dirs = dirs)
14. └─R.cache:::saveCache.default(stat, key = key, dirs = dirs)
15. └─base::file(pathname, open = "wb")
[ FAIL 1 | WARN 17 | SKIP 23 | PASS 23706 ]
Error:
! Test failures.
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [10s/12s] OK
- checking PDF version of manual ... [5s/5s] OK
- checking HTML version of manual ... [4s/4s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR