• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 18:00:42 UTC
• checking for file ‘spca/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘spca’ version ‘1.1.1’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/3s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘spca’ can be installed ... OK See the install log for details.
• used C++ compiler: ‘g++-16 (Debian 16.1.0-3) 16.1.0’
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/2s] OK
• checking loading without being on the library search path ... [1s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [12s/15s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking compilation flags in Makevars ... OK
• checking for GNU extensions in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking use of PKG_*FLAGS in Makefiles ... OK
• checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [5s/5s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [6s/7s] OK   Running ‘testthat.R’ [5s/7s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [15s/19s] OK
• checking PDF version of manual ... [5s/8s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0KK5B6’ ‘~/tmp/scratch/Rtmp0ZK6wW’   ‘~/tmp/scratch/Rtmp0tRjzG’ ‘~/tmp/scratch/Rtmp19QqnC’   ‘~/tmp/scratch/Rtmp1DlaZE’ ‘~/tmp/scratch/Rtmp1On0BG’   ‘~/tmp/scratch/Rtmp2W9UHn’ ‘~/tmp/scratch/Rtmp2bwOdm’   ‘~/tmp/scratch/Rtmp3J0sDq’ ‘~/tmp/scratch/Rtmp3nlLHM’   ‘~/tmp/scratch/Rtmp3v3LHy’ ‘~/tmp/scratch/Rtmp4KrVKW’   ‘~/tmp/scratch/Rtmp4PTO8v’ ‘~/tmp/scratch/Rtmp5Ni6sU’   ‘~/tmp/scratch/Rtmp5ORIxW’ ‘~/tmp/scratch/Rtmp5dstcn’   ‘~/tmp/scratch/Rtmp5srMHU’ ‘~/tmp/scratch/Rtmp5vZvw9’   ‘~/tmp/scratch/Rtmp62mITY’ ‘~/tmp/scratch/Rtmp6e0XLH’   ‘~/tmp/scratch/Rtmp6uI4ZQ’ ‘~/tmp/scratch/Rtmp7NxwbW’   ‘~/tmp/scratch/Rtmp7ZZsr7’ ‘~/tmp/scratch/Rtmp7hOVWu’   ‘~/tmp/scratch/Rtmp8mlU8S’ ‘~/tmp/scratch/Rtmp9tuOzs’   ‘~/tmp/scratch/Rtmp9wKvZS’ ‘~/tmp/scratch/RtmpA7BB0g’   ‘~/tmp/scratch/RtmpAWPPRg’ ‘~/tmp/scratch/RtmpAirnXd’   ‘~/tmp/scratch/RtmpB97eU8’ ‘~/tmp/scratch/RtmpCZLvCn’   ‘~/tmp/scratch/RtmpDFjcUR’ ‘~/tmp/scratch/RtmpDdGep7’   ‘~/tmp/scratch/RtmpDepfv5’ ‘~/tmp/scratch/RtmpF33B6d’   ‘~/tmp/scratch/RtmpGYH2ju’ ‘~/tmp/scratch/RtmpH4kk1X’   ‘~/tmp/scratch/RtmpH9rjLY’ ‘~/tmp/scratch/RtmpHP6dWH’   ‘~/tmp/scratch/RtmpHitCGL’ ‘~/tmp/scratch/RtmpJ6W3Ud’   ‘~/tmp/scratch/RtmpJB0NSh’ ‘~/tmp/scratch/RtmpJmY68O’   ‘~/tmp/scratch/RtmpKmiYp3’ ‘~/tmp/scratch/RtmpLlmaVb’   ‘~/tmp/scratch/RtmpLrsDMa’ ‘~/tmp/scratch/RtmpM2hudM’   ‘~/tmp/scratch/RtmpMDgJem’ ‘~/tmp/scratch/RtmpMPDrHU’   ‘~/tmp/scratch/RtmpMTzYIg’ ‘~/tmp/scratch/RtmpN5O5Fh’   ‘~/tmp/scratch/RtmpN6NoDT’ ‘~/tmp/scratch/RtmpNMLerc’   ‘~/tmp/scratch/RtmpO8HBNW’ ‘~/tmp/scratch/RtmpOkPzLt’   ‘~/tmp/scratch/RtmpPjTILn’ ‘~/tmp/scratch/RtmpQPxjcN’   ‘~/tmp/scratch/RtmpQzhQ5W’ ‘~/tmp/scratch/RtmpRCdvnD’   ‘~/tmp/scratch/RtmpRHxuSY’ ‘~/tmp/scratch/RtmpS0PUhB’   ‘~/tmp/scratch/RtmpSGVqcM’ ‘~/tmp/scratch/RtmpT5icY8’   ‘~/tmp/scratch/RtmpTZxjdI’ ‘~/tmp/scratch/RtmpU5y9rS’   ‘~/tmp/scratch/RtmpVGRk9x’ ‘~/tmp/scratch/RtmpVOKrvp’   ‘~/tmp/scratch/RtmpVQTmCJ’ ‘~/tmp/scratch/RtmpVuzFxX’   ‘~/tmp/scratch/RtmpWbeEyz’ ‘~/tmp/scratch/RtmpX5Rin4’   ‘~/tmp/scratch/RtmpYS3Xep’ ‘~/tmp/scratch/RtmpYaJSpE’   ‘~/tmp/scratch/RtmpZfCkkU’ ‘~/tmp/scratch/RtmpZrrVu1’   ‘~/tmp/scratch/Rtmpa1ts41’ ‘~/tmp/scratch/RtmpcEcejq’   ‘~/tmp/scratch/Rtmpcl29ON’ ‘~/tmp/scratch/RtmpcxDjqc’   ‘~/tmp/scratch/RtmpdQBbok’ ‘~/tmp/scratch/RtmpduT27o’   ‘~/tmp/scratch/RtmpeCJaEm’ ‘~/tmp/scratch/RtmpeI5j88’   ‘~/tmp/scratch/RtmpeKVp81’ ‘~/tmp/scratch/RtmpfOIH5d’   ‘~/tmp/scratch/RtmpgJ0J71’ ‘~/tmp/scratch/RtmpgQwWQB’   ‘~/tmp/scratch/RtmpgvQuji’ ‘~/tmp/scratch/Rtmpi5HIKT’   ‘~/tmp/scratch/RtmpiiL0gw’ ‘~/tmp/scratch/Rtmpj3ET4K’   ‘~/tmp/scratch/RtmpjxHBnw’ ‘~/tmp/scratch/RtmpkM0adu’   ‘~/tmp/scratch/RtmpkbgxXh’ ‘~/tmp/scratch/RtmpltPKaT’   ‘~/tmp/scratch/Rtmpmi39sL’ ‘~/tmp/scratch/RtmpmpYw9g’   ‘~/tmp/scratch/RtmpmrmWg5’ ‘~/tmp/scratch/RtmpnQhBS9’   ‘~/tmp/scratch/RtmpnV7uYa’ ‘~/tmp/scratch/Rtmpnre0Y0’   ‘~/tmp/scratch/Rtmpo5ZkLo’ ‘~/tmp/scratch/RtmpokJLGw’   ‘~/tmp/scratch/RtmpozHFIh’ ‘~/tmp/scratch/RtmppJeK2N’   ‘~/tmp/scratch/Rtmpphi6co’ ‘~/tmp/scratch/RtmppiL0wa’   ‘~/tmp/scratch/RtmprFnMbp’ ‘~/tmp/scratch/RtmprQE8MT’   ‘~/tmp/scratch/RtmprqrBKy’ ‘~/tmp/scratch/Rtmps9WZf2’   ‘~/tmp/scratch/RtmpsFy8My’ ‘~/tmp/scratch/RtmpsHIBYK’   ‘~/tmp/scratch/RtmpsJogmQ’ ‘~/tmp/scratch/RtmpsT5toC’   ‘~/tmp/scratch/Rtmpspe7ke’ ‘~/tmp/scratch/RtmptIO8sq’   ‘~/tmp/scratch/RtmpuJW9vO’ ‘~/tmp/scratch/RtmpvWvlJ0’   ‘~/tmp/scratch/Rtmpvffeuw’ ‘~/tmp/scratch/Rtmpvfyzf8’   ‘~/tmp/scratch/RtmpwQGveJ’ ‘~/tmp/scratch/RtmpwgNHW2’   ‘~/tmp/scratch/Rtmpwlk2y5’ ‘~/tmp/scratch/RtmpwvoWYx’   ‘~/tmp/scratch/RtmpyNKcAf’ ‘~/tmp/scratch/RtmpymWI2P’   ‘~/tmp/scratch/RtmpzQvFJP’ ‘~/tmp/scratch/RtmpzzKh3E’   ‘~/tmp/scratch/xvfb-run.08nt2I’ ‘~/tmp/scratch/xvfb-run.19VDfP’   ‘~/tmp/scratch/xvfb-run.1bilqZ’ ‘~/tmp/scratch/xvfb-run.2zorKD’   ‘~/tmp/scratch/xvfb-run.3nWj1B’ ‘~/tmp/scratch/xvfb-run.46amRB’   ‘~/tmp/scratch/xvfb-run.5O7n4m’ ‘~/tmp/scratch/xvfb-run.86iTw4’   ‘~/tmp/scratch/xvfb-run.88ucUI’ ‘~/tmp/scratch/xvfb-run.BDGlB5’   ‘~/tmp/scratch/xvfb-run.FBY6nx’ ‘~/tmp/scratch/xvfb-run.GTDJk9’   ‘~/tmp/scratch/xvfb-run.JFxtvR’ ‘~/tmp/scratch/xvfb-run.JMywix’   ‘~/tmp/scratch/xvfb-run.JoiHJw’ ‘~/tmp/scratch/xvfb-run.LIgeGW’   ‘~/tmp/scratch/xvfb-run.LpKVk7’ ‘~/tmp/scratch/xvfb-run.Mtac7y’   ‘~/tmp/scratch/xvfb-run.NDzTe3’ ‘~/tmp/scratch/xvfb-run.NnLMxE’   ‘~/tmp/scratch/xvfb-run.OCnrmG’ ‘~/tmp/scratch/xvfb-run.TTtaeg’   ‘~/tmp/scratch/xvfb-run.TvVDU1’ ‘~/tmp/scratch/xvfb-run.VhN20y’   ‘~/tmp/scratch/xvfb-run.W36sOr’ ‘~/tmp/scratch/xvfb-run.X4xheC’   ‘~/tmp/scratch/xvfb-run.YRGLmr’ ‘~/tmp/scratch/xvfb-run.Yd3knu’   ‘~/tmp/scratch/xvfb-run.a5msR8’ ‘~/tmp/scratch/xvfb-run.d21Ax4’   ‘~/tmp/scratch/xvfb-run.dEsNyx’ ‘~/tmp/scratch/xvfb-run.ddEVal’   ‘~/tmp/scratch/xvfb-run.glLxjg’ ‘~/tmp/scratch/xvfb-run.grYLAC’   ‘~/tmp/scratch/xvfb-run.iFgo3K’ ‘~/tmp/scratch/xvfb-run.lbB7TV’   ‘~/tmp/scratch/xvfb-run.n70vrg’ ‘~/tmp/scratch/xvfb-run.pT0BDO’   ‘~/tmp/scratch/xvfb-run.qf1kuN’ ‘~/tmp/scratch/xvfb-run.rN11Mu’   ‘~/tmp/scratch/xvfb-run.tBkE9b’ ‘~/tmp/scratch/xvfb-run.unT14d’   ‘~/tmp/scratch/xvfb-run.weUKXN’ ‘~/tmp/scratch/xvfb-run.wpqfOi’   ‘~/tmp/scratch/xvfb-run.yUbTOl’ ‘~/tmp/scratch/xvfb-run.zLJowz’   ‘~/tmp/scratch/xvfb-run.zprP19’
• DONE

Status: 1 NOTE