• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 17:57:57 UTC
• checking for file ‘spEDM/DESCRIPTION’ ... OK
• this is package ‘spEDM’ version ‘1.12’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/3s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘spEDM’ can be installed ... OK See the install log for details.
• used C++ compiler: ‘g++-16 (Debian 16.1.0-3) 16.1.0’
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [5s/6s] OK
• checking whether the package can be loaded with stated dependencies ... [5s/6s] OK
• checking whether the package can be unloaded cleanly ... [5s/7s] OK
• checking whether the namespace can be loaded with stated dependencies ... [5s/6s] OK
• checking whether the namespace can be unloaded cleanly ... [5s/6s] OK
• checking loading without being on the library search path ... [5s/6s] OK
• checking whether startup messages can be suppressed ... [6s/8s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [25s/35s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking compilation flags in Makevars ... OK
• checking for GNU extensions in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking use of PKG_*FLAGS in Makefiles ... OK
• checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [6s/8s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [11s/18s] OK
• checking PDF version of manual ... [4s/8s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp02sxVx’ ‘~/tmp/scratch/Rtmp0abz4p’   ‘~/tmp/scratch/Rtmp0f5M7s’ ‘~/tmp/scratch/Rtmp0k3gzn’   ‘~/tmp/scratch/Rtmp14ygkE’ ‘~/tmp/scratch/Rtmp1R7EoA’   ‘~/tmp/scratch/Rtmp1czHKB’ ‘~/tmp/scratch/Rtmp26NfpJ’   ‘~/tmp/scratch/Rtmp2JCfIZ’ ‘~/tmp/scratch/Rtmp2rMgRJ’   ‘~/tmp/scratch/Rtmp3Q0kC2’ ‘~/tmp/scratch/Rtmp3ZmpjR’   ‘~/tmp/scratch/Rtmp3fY4L3’ ‘~/tmp/scratch/Rtmp3mas1T’   ‘~/tmp/scratch/Rtmp4bOa66’ ‘~/tmp/scratch/Rtmp4dqtlP’   ‘~/tmp/scratch/Rtmp4jZlav’ ‘~/tmp/scratch/Rtmp5T4IQF’   ‘~/tmp/scratch/Rtmp5gxgjG’ ‘~/tmp/scratch/Rtmp5zPfL2’   ‘~/tmp/scratch/Rtmp6OeruM’ ‘~/tmp/scratch/Rtmp6hvzgz’   ‘~/tmp/scratch/Rtmp6iEoJW’ ‘~/tmp/scratch/Rtmp6pBedR’   ‘~/tmp/scratch/Rtmp7C6DcA’ ‘~/tmp/scratch/Rtmp8Ol09u’   ‘~/tmp/scratch/Rtmp9D2iXs’ ‘~/tmp/scratch/Rtmp9xzvgM’   ‘~/tmp/scratch/RtmpA5mhEo’ ‘~/tmp/scratch/RtmpAKlBkX’   ‘~/tmp/scratch/RtmpAY2KNz’ ‘~/tmp/scratch/RtmpAjkQXm’   ‘~/tmp/scratch/RtmpBrBmgx’ ‘~/tmp/scratch/RtmpBuejNb’   ‘~/tmp/scratch/RtmpDamsU0’ ‘~/tmp/scratch/RtmpEOmZt6’   ‘~/tmp/scratch/RtmpEYb0bl’ ‘~/tmp/scratch/RtmpFWzs8q’   ‘~/tmp/scratch/RtmpFfS8zY’ ‘~/tmp/scratch/RtmpGB6Ix6’   ‘~/tmp/scratch/RtmpGEkic5’ ‘~/tmp/scratch/RtmpH450Rk’   ‘~/tmp/scratch/RtmpHH2hD0’ ‘~/tmp/scratch/RtmpHrnkkC’   ‘~/tmp/scratch/RtmpIJtk83’ ‘~/tmp/scratch/RtmpITYMOc’   ‘~/tmp/scratch/RtmpIVooJP’ ‘~/tmp/scratch/RtmpIoI855’   ‘~/tmp/scratch/RtmpL3Oo0c’ ‘~/tmp/scratch/RtmpLfthqZ’   ‘~/tmp/scratch/RtmpLpQwpV’ ‘~/tmp/scratch/RtmpMCuY7r’   ‘~/tmp/scratch/RtmpN0NK9e’ ‘~/tmp/scratch/RtmpN73uF1’   ‘~/tmp/scratch/RtmpNGVUxG’ ‘~/tmp/scratch/RtmpNpOcZn’   ‘~/tmp/scratch/RtmpO7KaM1’ ‘~/tmp/scratch/RtmpOGOWOX’   ‘~/tmp/scratch/RtmpOKQlH3’ ‘~/tmp/scratch/RtmpPYbW6B’   ‘~/tmp/scratch/RtmpPuIQ9H’ ‘~/tmp/scratch/RtmpQr0J7b’   ‘~/tmp/scratch/RtmpR6Yp56’ ‘~/tmp/scratch/RtmpRCiIpI’   ‘~/tmp/scratch/RtmpRETlll’ ‘~/tmp/scratch/RtmpROYk2d’   ‘~/tmp/scratch/RtmpRSxJur’ ‘~/tmp/scratch/RtmpRXfnu7’   ‘~/tmp/scratch/RtmpRfRJxg’ ‘~/tmp/scratch/RtmpRpAAyq’   ‘~/tmp/scratch/RtmpRrUwos’ ‘~/tmp/scratch/RtmpSJzDJi’   ‘~/tmp/scratch/RtmpSZOPKG’ ‘~/tmp/scratch/RtmpT8Papt’   ‘~/tmp/scratch/RtmpUUTtEK’ ‘~/tmp/scratch/RtmpUhIzSV’   ‘~/tmp/scratch/RtmpUhTgEr’ ‘~/tmp/scratch/RtmpVDtskq’   ‘~/tmp/scratch/RtmpVjcPxy’ ‘~/tmp/scratch/RtmpVyC1CP’   ‘~/tmp/scratch/RtmpWPcBVu’ ‘~/tmp/scratch/RtmpWlV3Tu’   ‘~/tmp/scratch/RtmpWnqQQ7’ ‘~/tmp/scratch/RtmpWo0DcW’   ‘~/tmp/scratch/RtmpX6pyna’ ‘~/tmp/scratch/RtmpY3BQYV’   ‘~/tmp/scratch/RtmpYbKaYd’ ‘~/tmp/scratch/RtmpYbo96E’   ‘~/tmp/scratch/RtmpYzAi5u’ ‘~/tmp/scratch/RtmpZl2gTe’   ‘~/tmp/scratch/RtmpZml9KQ’ ‘~/tmp/scratch/RtmpZnlUfm’   ‘~/tmp/scratch/RtmpZq4j0f’ ‘~/tmp/scratch/Rtmpa12OYM’   ‘~/tmp/scratch/RtmpaDCxhe’ ‘~/tmp/scratch/RtmpaDLysn’   ‘~/tmp/scratch/RtmpagrJvZ’ ‘~/tmp/scratch/RtmpapetVz’   ‘~/tmp/scratch/RtmpbBycpp’ ‘~/tmp/scratch/RtmpbTpc9t’   ‘~/tmp/scratch/RtmpbVo1Mb’ ‘~/tmp/scratch/Rtmpbg3GSf’   ‘~/tmp/scratch/RtmpcEQPsV’ ‘~/tmp/scratch/RtmpcTFEVO’   ‘~/tmp/scratch/RtmpcceUkk’ ‘~/tmp/scratch/RtmpcedUxR’   ‘~/tmp/scratch/RtmpdXfbFg’ ‘~/tmp/scratch/Rtmpdn42MO’   ‘~/tmp/scratch/RtmpehXcjh’ ‘~/tmp/scratch/Rtmpf2CfoQ’   ‘~/tmp/scratch/RtmpfGEZFQ’ ‘~/tmp/scratch/Rtmpfe4Lii’   ‘~/tmp/scratch/RtmpgM3r0j’ ‘~/tmp/scratch/RtmpgTyrkP’   ‘~/tmp/scratch/RtmpgndrjI’ ‘~/tmp/scratch/RtmphuGJCX’   ‘~/tmp/scratch/Rtmpi8fKmX’ ‘~/tmp/scratch/RtmpiBrqFE’   ‘~/tmp/scratch/Rtmpik7t4C’ ‘~/tmp/scratch/Rtmpj3snYP’   ‘~/tmp/scratch/RtmpjDWojc’ ‘~/tmp/scratch/RtmpjSqR75’   ‘~/tmp/scratch/Rtmpjtv1MB’ ‘~/tmp/scratch/Rtmpk38Eto’   ‘~/tmp/scratch/RtmpkQlGLn’ ‘~/tmp/scratch/RtmpkcPVdw’   ‘~/tmp/scratch/Rtmpke7z9l’ ‘~/tmp/scratch/Rtmpkz4l7x’   ‘~/tmp/scratch/RtmpllxbiA’ ‘~/tmp/scratch/Rtmpm8WfIP’   ‘~/tmp/scratch/RtmpmDjyU9’ ‘~/tmp/scratch/RtmpmSpUFY’   ‘~/tmp/scratch/RtmpmYT7cs’ ‘~/tmp/scratch/RtmpmbJdHM’   ‘~/tmp/scratch/RtmpmeAnWG’ ‘~/tmp/scratch/RtmpmesyRB’   ‘~/tmp/scratch/Rtmpnac1QZ’ ‘~/tmp/scratch/RtmpndzC6f’   ‘~/tmp/scratch/RtmpoXdpO2’ ‘~/tmp/scratch/RtmpovHFbT’   ‘~/tmp/scratch/Rtmpovsl5u’ ‘~/tmp/scratch/Rtmpp9Uj4n’   ‘~/tmp/scratch/RtmppGl1Q7’ ‘~/tmp/scratch/RtmppR5kxM’   ‘~/tmp/scratch/Rtmppbh0hb’ ‘~/tmp/scratch/Rtmppjl3zY’   ‘~/tmp/scratch/RtmppoxI5I’ ‘~/tmp/scratch/RtmppzAp68’   ‘~/tmp/scratch/Rtmpr9afk0’ ‘~/tmp/scratch/RtmprbzwDX’   ‘~/tmp/scratch/RtmpsLCGhN’ ‘~/tmp/scratch/RtmpsOIWwJ’   ‘~/tmp/scratch/RtmpsTfIha’ ‘~/tmp/scratch/RtmpsXgkFH’   ‘~/tmp/scratch/RtmptEpZnA’ ‘~/tmp/scratch/RtmptRuXmZ’   ‘~/tmp/scratch/RtmpuADcbf’ ‘~/tmp/scratch/RtmpvcdMTN’   ‘~/tmp/scratch/Rtmpvvx9cX’ ‘~/tmp/scratch/RtmpwBZ5Oo’   ‘~/tmp/scratch/RtmpwC37oz’ ‘~/tmp/scratch/RtmpwLD2Tk’   ‘~/tmp/scratch/RtmpwgBOMu’ ‘~/tmp/scratch/RtmpwlLdRc’   ‘~/tmp/scratch/RtmpxEhsBo’ ‘~/tmp/scratch/RtmpxX5PIH’   ‘~/tmp/scratch/RtmpyJkzK4’ ‘~/tmp/scratch/RtmpyLgRXw’   ‘~/tmp/scratch/Rtmpyx8CMb’ ‘~/tmp/scratch/xvfb-run.1YAREW’   ‘~/tmp/scratch/xvfb-run.2qJghX’ ‘~/tmp/scratch/xvfb-run.3N8dhu’   ‘~/tmp/scratch/xvfb-run.5OMBiI’ ‘~/tmp/scratch/xvfb-run.6esWrM’   ‘~/tmp/scratch/xvfb-run.6fqrvT’ ‘~/tmp/scratch/xvfb-run.7g6Tvw’   ‘~/tmp/scratch/xvfb-run.83eeYr’ ‘~/tmp/scratch/xvfb-run.8ePMsM’   ‘~/tmp/scratch/xvfb-run.ANZLSB’ ‘~/tmp/scratch/xvfb-run.BWD8cd’   ‘~/tmp/scratch/xvfb-run.CDLjhI’ ‘~/tmp/scratch/xvfb-run.CY2G0o’   ‘~/tmp/scratch/xvfb-run.CatFPL’ ‘~/tmp/scratch/xvfb-run.DpnBhm’   ‘~/tmp/scratch/xvfb-run.En8Pac’ ‘~/tmp/scratch/xvfb-run.FVmMPa’   ‘~/tmp/scratch/xvfb-run.GRDdqZ’ ‘~/tmp/scratch/xvfb-run.GuGmxe’   ‘~/tmp/scratch/xvfb-run.Hk9b9t’ ‘~/tmp/scratch/xvfb-run.HnEEdr’   ‘~/tmp/scratch/xvfb-run.I9Wa6e’ ‘~/tmp/scratch/xvfb-run.Jj6apw’   ‘~/tmp/scratch/xvfb-run.K6a1op’ ‘~/tmp/scratch/xvfb-run.M6I0Qn’   ‘~/tmp/scratch/xvfb-run.NDvCDz’ ‘~/tmp/scratch/xvfb-run.PGqwO1’   ‘~/tmp/scratch/xvfb-run.QQBx0U’ ‘~/tmp/scratch/xvfb-run.QVAV9H’   ‘~/tmp/scratch/xvfb-run.QeeLBi’ ‘~/tmp/scratch/xvfb-run.SDFvES’   ‘~/tmp/scratch/xvfb-run.Sb1ZOq’ ‘~/tmp/scratch/xvfb-run.U3KMc4’   ‘~/tmp/scratch/xvfb-run.YfdYfL’ ‘~/tmp/scratch/xvfb-run.ZwVA2B’   ‘~/tmp/scratch/xvfb-run.ZzT0aF’ ‘~/tmp/scratch/xvfb-run.a9ySc2’   ‘~/tmp/scratch/xvfb-run.bsyayk’ ‘~/tmp/scratch/xvfb-run.byyNiZ’   ‘~/tmp/scratch/xvfb-run.ce4yCc’ ‘~/tmp/scratch/xvfb-run.d052pm’   ‘~/tmp/scratch/xvfb-run.dIYJJ0’ ‘~/tmp/scratch/xvfb-run.dpJP3Z’   ‘~/tmp/scratch/xvfb-run.eeYDzd’ ‘~/tmp/scratch/xvfb-run.f5oUH0’   ‘~/tmp/scratch/xvfb-run.fHQjGr’ ‘~/tmp/scratch/xvfb-run.fUuxaP’   ‘~/tmp/scratch/xvfb-run.fy2FDh’ ‘~/tmp/scratch/xvfb-run.gLEXBG’   ‘~/tmp/scratch/xvfb-run.h2bkSg’ ‘~/tmp/scratch/xvfb-run.ibKjFw’   ‘~/tmp/scratch/xvfb-run.ibhFtn’ ‘~/tmp/scratch/xvfb-run.iz6uPs’   ‘~/tmp/scratch/xvfb-run.k9a2PO’ ‘~/tmp/scratch/xvfb-run.lyowqi’   ‘~/tmp/scratch/xvfb-run.mCzitf’ ‘~/tmp/scratch/xvfb-run.mRsAAn’   ‘~/tmp/scratch/xvfb-run.mltk8f’ ‘~/tmp/scratch/xvfb-run.nk7gy5’   ‘~/tmp/scratch/xvfb-run.nrpGT7’ ‘~/tmp/scratch/xvfb-run.oTzBJl’   ‘~/tmp/scratch/xvfb-run.pSdFLD’ ‘~/tmp/scratch/xvfb-run.qXmhXo’   ‘~/tmp/scratch/xvfb-run.qbZJqQ’ ‘~/tmp/scratch/xvfb-run.rwFhXx’   ‘~/tmp/scratch/xvfb-run.sn9uF5’ ‘~/tmp/scratch/xvfb-run.sve3eh’   ‘~/tmp/scratch/xvfb-run.tiHo9N’ ‘~/tmp/scratch/xvfb-run.tiejQq’   ‘~/tmp/scratch/xvfb-run.tnj7rd’ ‘~/tmp/scratch/xvfb-run.too2wf’   ‘~/tmp/scratch/xvfb-run.uK2qDt’ ‘~/tmp/scratch/xvfb-run.uOu5er’   ‘~/tmp/scratch/xvfb-run.uht0Qz’ ‘~/tmp/scratch/xvfb-run.z3CnL8’   ‘~/tmp/scratch/xvfb-run.zd6Zw0’ ‘~/tmp/scratch/xvfb-run.zssHJg’
• DONE

Status: 1 NOTE