• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 17:56:52 UTC
• checking for file ‘sodavis/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘sodavis’ version ‘1.2’
• checking CRAN incoming feasibility ... [1s/1s] NOTE Maintainer: ‘Yang Li <yangli.stat@gmail.com>’ No Authors@R field in DESCRIPTION. Please add one, modifying   Authors@R: c(person(given = "Yang",                       family = "Li",                       role = c("aut", "cre"),                       email = "yangli.stat@gmail.com"),                person(given = c("Jun", "S."),                       family = "Liu",                       role = "aut")) as necessary.
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘sodavis’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [4s/5s] OK
• checking Rd files ... [0s/0s] NOTE checkRd: (-1) s_soda_pred.Rd:8: Lost braces; missing escapes or markup?      8 | S-SODA assumes within each slice the X vector follow multivariate normal distribution. This function predicts the response y by reverting the P(X | slice(y)) to P(slice(y) | X), and estimates the E(y|X) as sum_{h} E(y | slice(y)=h, X) P (slice(y)=h | X)        | ^
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/1s] OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [0s/0s] OK
• checking PDF version of manual ... [4s/5s] OK
• checking HTML version of manual ... [0s/0s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0SdDjb’ ‘~/tmp/scratch/Rtmp2Jczsc’   ‘~/tmp/scratch/Rtmp4iya0e’ ‘~/tmp/scratch/Rtmp6U6DSq’   ‘~/tmp/scratch/Rtmp6eF2qZ’ ‘~/tmp/scratch/Rtmp6f48tL’   ‘~/tmp/scratch/Rtmp6l8D4N’ ‘~/tmp/scratch/Rtmp7LBCJc’   ‘~/tmp/scratch/Rtmp7iiExO’ ‘~/tmp/scratch/Rtmp8jkV3i’   ‘~/tmp/scratch/Rtmp8mWvbn’ ‘~/tmp/scratch/Rtmp8r6TD8’   ‘~/tmp/scratch/Rtmp9G2E84’ ‘~/tmp/scratch/Rtmp9fXeeV’   ‘~/tmp/scratch/Rtmp9gHdlW’ ‘~/tmp/scratch/RtmpAtKndi’   ‘~/tmp/scratch/RtmpBl1APc’ ‘~/tmp/scratch/RtmpCI0jFN’   ‘~/tmp/scratch/RtmpCOHunj’ ‘~/tmp/scratch/RtmpD0c8iP’   ‘~/tmp/scratch/RtmpD72wcS’ ‘~/tmp/scratch/RtmpDvbqdn’   ‘~/tmp/scratch/RtmpE5Tnp3’ ‘~/tmp/scratch/RtmpEAUpTR’   ‘~/tmp/scratch/RtmpEe2xsk’ ‘~/tmp/scratch/RtmpEfEnHg’   ‘~/tmp/scratch/RtmpEpe5Ph’ ‘~/tmp/scratch/RtmpFoK6sw’   ‘~/tmp/scratch/RtmpGcA7l0’ ‘~/tmp/scratch/RtmpGlgDKj’   ‘~/tmp/scratch/RtmpHXc5MW’ ‘~/tmp/scratch/RtmpHhbYlW’   ‘~/tmp/scratch/RtmpI4rONS’ ‘~/tmp/scratch/RtmpKEBRY9’   ‘~/tmp/scratch/RtmpKuNdwK’ ‘~/tmp/scratch/RtmpMFQ4SL’   ‘~/tmp/scratch/RtmpMtcVrP’ ‘~/tmp/scratch/RtmpMvK1T5’   ‘~/tmp/scratch/RtmpMzBxCM’ ‘~/tmp/scratch/RtmpN3VDKd’   ‘~/tmp/scratch/RtmpN5f4QX’ ‘~/tmp/scratch/RtmpNM9cja’   ‘~/tmp/scratch/RtmpNhXW6D’ ‘~/tmp/scratch/RtmpNz8yyu’   ‘~/tmp/scratch/RtmpOaCGbV’ ‘~/tmp/scratch/RtmpPsULpT’   ‘~/tmp/scratch/RtmpQUInSm’ ‘~/tmp/scratch/RtmpQe4Us0’   ‘~/tmp/scratch/RtmpQtF0Bv’ ‘~/tmp/scratch/RtmpRogK2N’   ‘~/tmp/scratch/RtmpTXVtfX’ ‘~/tmp/scratch/RtmpU9vWUW’   ‘~/tmp/scratch/RtmpUH505E’ ‘~/tmp/scratch/RtmpUKRwvE’   ‘~/tmp/scratch/RtmpUtsFVQ’ ‘~/tmp/scratch/RtmpVkYN4c’   ‘~/tmp/scratch/RtmpYGDsic’ ‘~/tmp/scratch/RtmpYZKaUs’   ‘~/tmp/scratch/RtmpYsYLTV’ ‘~/tmp/scratch/RtmpZ9I5rQ’   ‘~/tmp/scratch/RtmpZRNUzs’ ‘~/tmp/scratch/RtmpZgyCBM’   ‘~/tmp/scratch/RtmpZzgu5c’ ‘~/tmp/scratch/RtmpaulfB9’   ‘~/tmp/scratch/Rtmpav8HLF’ ‘~/tmp/scratch/Rtmpd8Eysa’   ‘~/tmp/scratch/RtmpfJHqq0’ ‘~/tmp/scratch/RtmpgnuRF9’   ‘~/tmp/scratch/RtmpgqrQl2’ ‘~/tmp/scratch/RtmpjboFps’   ‘~/tmp/scratch/RtmpkdrKpf’ ‘~/tmp/scratch/RtmplQBm03’   ‘~/tmp/scratch/RtmplTwsf6’ ‘~/tmp/scratch/RtmplWphYj’   ‘~/tmp/scratch/RtmpmQ672I’ ‘~/tmp/scratch/RtmpmxmckI’   ‘~/tmp/scratch/Rtmpnb3lZb’ ‘~/tmp/scratch/Rtmpnq6lAG’   ‘~/tmp/scratch/RtmpnsXU6u’ ‘~/tmp/scratch/RtmppuDuBc’   ‘~/tmp/scratch/RtmppvIyIB’ ‘~/tmp/scratch/RtmpqRuRcx’   ‘~/tmp/scratch/Rtmpr5gbyw’ ‘~/tmp/scratch/RtmprLxAva’   ‘~/tmp/scratch/RtmprpUoZq’ ‘~/tmp/scratch/RtmprxNzR0’   ‘~/tmp/scratch/Rtmpt7TjgV’ ‘~/tmp/scratch/RtmptpxVz7’   ‘~/tmp/scratch/RtmpuD3tUD’ ‘~/tmp/scratch/Rtmpv6IoGQ’   ‘~/tmp/scratch/RtmpvGH029’ ‘~/tmp/scratch/Rtmpx8o1ek’   ‘~/tmp/scratch/RtmpxVLRH4’ ‘~/tmp/scratch/Rtmpxkn24z’   ‘~/tmp/scratch/RtmpyDR9ll’ ‘~/tmp/scratch/RtmpybL9DG’   ‘~/tmp/scratch/RtmpymfDDM’ ‘~/tmp/scratch/Rtmpz8wr18’   ‘~/tmp/scratch/RtmpzARzl9’ ‘~/tmp/scratch/xvfb-run.1GWjxO’   ‘~/tmp/scratch/xvfb-run.1JLoIk’ ‘~/tmp/scratch/xvfb-run.1hkZV8’   ‘~/tmp/scratch/xvfb-run.2ylAlf’ ‘~/tmp/scratch/xvfb-run.DuJDbB’   ‘~/tmp/scratch/xvfb-run.M33Xnj’ ‘~/tmp/scratch/xvfb-run.NdDxCK’   ‘~/tmp/scratch/xvfb-run.RVIpEI’ ‘~/tmp/scratch/xvfb-run.T71TDs’   ‘~/tmp/scratch/xvfb-run.TEf4p2’ ‘~/tmp/scratch/xvfb-run.Ue5trr’   ‘~/tmp/scratch/xvfb-run.XLC34a’ ‘~/tmp/scratch/xvfb-run.Xbavlk’   ‘~/tmp/scratch/xvfb-run.XnDITq’ ‘~/tmp/scratch/xvfb-run.cNDwc3’   ‘~/tmp/scratch/xvfb-run.db5dv9’ ‘~/tmp/scratch/xvfb-run.eZudkN’   ‘~/tmp/scratch/xvfb-run.efP8Ih’ ‘~/tmp/scratch/xvfb-run.ejdpc4’   ‘~/tmp/scratch/xvfb-run.hq8uei’ ‘~/tmp/scratch/xvfb-run.jOZCEW’   ‘~/tmp/scratch/xvfb-run.ko1w3L’ ‘~/tmp/scratch/xvfb-run.ofSHFQ’   ‘~/tmp/scratch/xvfb-run.qf29K0’ ‘~/tmp/scratch/xvfb-run.rvHeGS’   ‘~/tmp/scratch/xvfb-run.tI0hx3’ ‘~/tmp/scratch/xvfb-run.uP74yQ’   ‘~/tmp/scratch/xvfb-run.vLKrib’ ‘~/tmp/scratch/xvfb-run.vnX9li’   ‘~/tmp/scratch/xvfb-run.yKXfwp’ ‘~/tmp/scratch/xvfb-run.ya7mVF’
• DONE

Status: 3 NOTEs