• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 17:57:13 UTC
• checking for file ‘sodavis/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘sodavis’ version ‘1.2’
• checking CRAN incoming feasibility ... [1s/1s] NOTE Maintainer: ‘Yang Li <yangli.stat@gmail.com>’ No Authors@R field in DESCRIPTION. Please add one, modifying   Authors@R: c(person(given = "Yang",                       family = "Li",                       role = c("aut", "cre"),                       email = "yangli.stat@gmail.com"),                person(given = c("Jun", "S."),                       family = "Liu",                       role = "aut")) as necessary.
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘sodavis’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [4s/7s] OK
• checking Rd files ... [0s/0s] NOTE checkRd: (-1) s_soda_pred.Rd:8: Lost braces; missing escapes or markup?      8 | S-SODA assumes within each slice the X vector follow multivariate normal distribution. This function predicts the response y by reverting the P(X | slice(y)) to P(slice(y) | X), and estimates the E(y|X) as sum_{h} E(y | slice(y)=h, X) P (slice(y)=h | X)        | ^
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [1s/1s] OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [0s/1s] OK
• checking PDF version of manual ... [4s/5s] OK
• checking HTML version of manual ... [0s/0s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp1YSFsu’ ‘~/tmp/scratch/Rtmp28zft3’   ‘~/tmp/scratch/Rtmp2d4i7V’ ‘~/tmp/scratch/Rtmp4OZnn5’   ‘~/tmp/scratch/Rtmp4YvcYb’ ‘~/tmp/scratch/Rtmp4gNvYE’   ‘~/tmp/scratch/Rtmp6xRDgp’ ‘~/tmp/scratch/Rtmp78fuvI’   ‘~/tmp/scratch/Rtmp79VqgK’ ‘~/tmp/scratch/Rtmp8W1AQo’   ‘~/tmp/scratch/Rtmp8x22vG’ ‘~/tmp/scratch/Rtmp91O0ux’   ‘~/tmp/scratch/Rtmp91fA2w’ ‘~/tmp/scratch/RtmpA8hzpw’   ‘~/tmp/scratch/RtmpCDzwQz’ ‘~/tmp/scratch/RtmpDHoLFE’   ‘~/tmp/scratch/RtmpDVlDdU’ ‘~/tmp/scratch/RtmpDfMM5m’   ‘~/tmp/scratch/RtmpDtzVBE’ ‘~/tmp/scratch/RtmpDzGevs’   ‘~/tmp/scratch/RtmpE3CGNJ’ ‘~/tmp/scratch/RtmpE7mr7d’   ‘~/tmp/scratch/RtmpEKHn87’ ‘~/tmp/scratch/RtmpETYUXj’   ‘~/tmp/scratch/RtmpEhMKFk’ ‘~/tmp/scratch/RtmpFGz6Wy’   ‘~/tmp/scratch/RtmpFQKcWO’ ‘~/tmp/scratch/RtmpFVnEgb’   ‘~/tmp/scratch/RtmpGG3AI6’ ‘~/tmp/scratch/RtmpHJwRPP’   ‘~/tmp/scratch/RtmpHOknoY’ ‘~/tmp/scratch/RtmpI2tHUB’   ‘~/tmp/scratch/RtmpIBsgSv’ ‘~/tmp/scratch/RtmpIDfd91’   ‘~/tmp/scratch/RtmpIiapt2’ ‘~/tmp/scratch/RtmpJ4GxyG’   ‘~/tmp/scratch/RtmpJZLqPQ’ ‘~/tmp/scratch/RtmpKjyhQd’   ‘~/tmp/scratch/RtmpLtAAHz’ ‘~/tmp/scratch/RtmpM4Kql2’   ‘~/tmp/scratch/RtmpMPdOun’ ‘~/tmp/scratch/RtmpMbWmx3’   ‘~/tmp/scratch/RtmpNAR7o3’ ‘~/tmp/scratch/RtmpNGjaDg’   ‘~/tmp/scratch/RtmpNePNBI’ ‘~/tmp/scratch/RtmpNeZ8wT’   ‘~/tmp/scratch/RtmpNnVPah’ ‘~/tmp/scratch/RtmpOozGZv’   ‘~/tmp/scratch/RtmpP1gYjo’ ‘~/tmp/scratch/RtmpPILLCW’   ‘~/tmp/scratch/RtmpPXotLq’ ‘~/tmp/scratch/RtmpPvDZsL’   ‘~/tmp/scratch/RtmpQoExA7’ ‘~/tmp/scratch/RtmpS6FQQ8’   ‘~/tmp/scratch/RtmpSJTojD’ ‘~/tmp/scratch/RtmpSnlHxD’   ‘~/tmp/scratch/RtmpUY6vfo’ ‘~/tmp/scratch/RtmpUbSHLO’   ‘~/tmp/scratch/RtmpUnNWqQ’ ‘~/tmp/scratch/RtmpVUrA2l’   ‘~/tmp/scratch/RtmpVshErg’ ‘~/tmp/scratch/RtmpXa1x3B’   ‘~/tmp/scratch/RtmpYRqjuj’ ‘~/tmp/scratch/RtmpYc86EZ’   ‘~/tmp/scratch/RtmpZ7F7ok’ ‘~/tmp/scratch/RtmpZFz5KA’   ‘~/tmp/scratch/RtmpZLY7qO’ ‘~/tmp/scratch/RtmpZRpJMG’   ‘~/tmp/scratch/RtmpZnE485’ ‘~/tmp/scratch/RtmpaGEBOH’   ‘~/tmp/scratch/Rtmpajz2x7’ ‘~/tmp/scratch/Rtmpaoxn24’   ‘~/tmp/scratch/RtmpaswQSM’ ‘~/tmp/scratch/Rtmpc2j0gb’   ‘~/tmp/scratch/RtmpfKhdGX’ ‘~/tmp/scratch/RtmpfcA7pM’   ‘~/tmp/scratch/RtmpfqqgkI’ ‘~/tmp/scratch/RtmpgSesJG’   ‘~/tmp/scratch/RtmpgStbKw’ ‘~/tmp/scratch/RtmpghghRC’   ‘~/tmp/scratch/Rtmpi5Wnlc’ ‘~/tmp/scratch/RtmpirFOy2’   ‘~/tmp/scratch/RtmpjL1lrf’ ‘~/tmp/scratch/Rtmpk2YrEm’   ‘~/tmp/scratch/RtmpkRxfrM’ ‘~/tmp/scratch/RtmplVgHBE’   ‘~/tmp/scratch/Rtmple84wa’ ‘~/tmp/scratch/RtmplffxkM’   ‘~/tmp/scratch/RtmpmEH0dz’ ‘~/tmp/scratch/RtmpmqLUNo’   ‘~/tmp/scratch/RtmpnH6BDS’ ‘~/tmp/scratch/RtmpoHjAPw’   ‘~/tmp/scratch/RtmpoJ3Ka6’ ‘~/tmp/scratch/RtmpqADAwN’   ‘~/tmp/scratch/RtmprUAjP9’ ‘~/tmp/scratch/Rtmps3AgND’   ‘~/tmp/scratch/RtmpsIkJEM’ ‘~/tmp/scratch/RtmptQnTXu’   ‘~/tmp/scratch/RtmptRvwmC’ ‘~/tmp/scratch/Rtmptj8yS0’   ‘~/tmp/scratch/RtmpuIWtrI’ ‘~/tmp/scratch/RtmpvETqvu’   ‘~/tmp/scratch/RtmpvNNtmL’ ‘~/tmp/scratch/Rtmpvi2e3k’   ‘~/tmp/scratch/RtmpvvWYaP’ ‘~/tmp/scratch/RtmpwVDy7P’   ‘~/tmp/scratch/RtmpxQZD11’ ‘~/tmp/scratch/RtmpyJZ6na’   ‘~/tmp/scratch/RtmpyouXkA’ ‘~/tmp/scratch/RtmpzPjC9q’   ‘~/tmp/scratch/xvfb-run.5M9ExJ’ ‘~/tmp/scratch/xvfb-run.5myGPS’   ‘~/tmp/scratch/xvfb-run.C6Gc8l’ ‘~/tmp/scratch/xvfb-run.DAuncx’   ‘~/tmp/scratch/xvfb-run.DFULJW’ ‘~/tmp/scratch/xvfb-run.JNpeAh’   ‘~/tmp/scratch/xvfb-run.LBHqQa’ ‘~/tmp/scratch/xvfb-run.NYmnML’   ‘~/tmp/scratch/xvfb-run.OBU2Vz’ ‘~/tmp/scratch/xvfb-run.QJp74Z’   ‘~/tmp/scratch/xvfb-run.Qtnqi8’ ‘~/tmp/scratch/xvfb-run.S1rvcy’   ‘~/tmp/scratch/xvfb-run.SwJ6ky’ ‘~/tmp/scratch/xvfb-run.TJTXbU’   ‘~/tmp/scratch/xvfb-run.Wdlot4’ ‘~/tmp/scratch/xvfb-run.Ws5Ytn’   ‘~/tmp/scratch/xvfb-run.XV6tip’ ‘~/tmp/scratch/xvfb-run.YpfIr9’   ‘~/tmp/scratch/xvfb-run.akJxZo’ ‘~/tmp/scratch/xvfb-run.evjRU7’   ‘~/tmp/scratch/xvfb-run.fpOXoU’ ‘~/tmp/scratch/xvfb-run.gNxIMH’   ‘~/tmp/scratch/xvfb-run.hJ40c4’ ‘~/tmp/scratch/xvfb-run.iJy5bg’   ‘~/tmp/scratch/xvfb-run.nNummP’ ‘~/tmp/scratch/xvfb-run.nm69n8’   ‘~/tmp/scratch/xvfb-run.sbYSW6’ ‘~/tmp/scratch/xvfb-run.uFkeoI’   ‘~/tmp/scratch/xvfb-run.uSUgZ5’ ‘~/tmp/scratch/xvfb-run.wZ46Hb’   ‘~/tmp/scratch/xvfb-run.xRxxrR’
• DONE

Status: 3 NOTEs