* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘sequoia’ ...
** this is package ‘sequoia’ version ‘3.0.3’
** package ‘sequoia’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-15 (Debian 15.2.0-1) 15.2.0’
using Fortran compiler: ‘GNU Fortran (Debian 15.2.0-1) 15.2.0’
make[1]: Entering directory '/tmp/RtmpJTgOkq/R.INSTALL29cf1c39ec408/sequoia/src'
gfortran-15  -fpic  -g -O2 -Wall -pedantic -mtune=native  -c  MkRelA.f90 -o MkRelA.o
gfortran-15  -fpic  -g -O2 -Wall -pedantic -mtune=native  -c  Sequoia.f90 -o Sequoia.o
Sequoia.f90:3919:53:

 3919 | double precision :: LLcp(3,2), LLU(4), U, ALR(3,2), ALRtmp, LLtmp, LLtrio(6), &
      |                                                     1~~~~~
Warning: Unused variable ‘alrtmp’ declared at (1) [-Wunused-variable]
Sequoia.f90:16054:35:

16054 | integer :: i, r, AncB(2,mxA), Bi, AncBi(2, mxA), catA, catB, GA(2), catG, &
      |                                   1~~~~~~~~~~~~
Warning: Unused variable ‘ancbi’ declared at (1) [-Wunused-variable]
gfortran-15  -fpic  -g -O2 -Wall -pedantic -mtune=native  -c  SimGenoErrors.f90 -o SimGenoErrors.o
gfortran-15  -fpic  -g -O2 -Wall -pedantic -mtune=native  -c  ester.f90 -o ester.o
gcc-15 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
gcc-15 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c pretty_R_print.c -o pretty_R_print.o
gcc-15 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o sequoia.so MkRelA.o Sequoia.o SimGenoErrors.o ester.o init.o pretty_R_print.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpJTgOkq/R.INSTALL29cf1c39ec408/sequoia/src'
make[1]: Entering directory '/tmp/RtmpJTgOkq/R.INSTALL29cf1c39ec408/sequoia/src'
make[1]: Leaving directory '/tmp/RtmpJTgOkq/R.INSTALL29cf1c39ec408/sequoia/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-sequoia/00new/sequoia/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (sequoia)