• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 17:45:45 UTC
• checking for file ‘seqmon/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘seqmon’ version ‘2.5’
• checking CRAN incoming feasibility ... [1s/2s] NOTE Maintainer: ‘Hui Zheng <hzheng1@mgh.harvard.edu>’ No Authors@R field in DESCRIPTION. Please add one, modifying   Authors@R: c(person(given = c("David", "A"),                       family = "Schoenfeld",                       role = "aut"),                person(given = "Hui",                       family = "Zheng",                       role = c("aut", "cre"),                       email = "hzheng1@mgh.harvard.edu")) as necessary.
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘seqmon’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [4s/7s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking examples ... [10s/11s] OK
• checking PDF version of manual ... [5s/10s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0fOr9p’ ‘~/tmp/scratch/Rtmp16QrH2’   ‘~/tmp/scratch/Rtmp1BDexF’ ‘~/tmp/scratch/Rtmp1rGWMW’   ‘~/tmp/scratch/Rtmp1zaedh’ ‘~/tmp/scratch/Rtmp3SBd5g’   ‘~/tmp/scratch/Rtmp5OevvH’ ‘~/tmp/scratch/Rtmp699SC3’   ‘~/tmp/scratch/Rtmp7PSJFM’ ‘~/tmp/scratch/Rtmp9Aakt9’   ‘~/tmp/scratch/Rtmp9KzBiT’ ‘~/tmp/scratch/Rtmp9S7Iz2’   ‘~/tmp/scratch/Rtmp9XSvPz’ ‘~/tmp/scratch/Rtmp9ZwctG’   ‘~/tmp/scratch/RtmpAJnlKs’ ‘~/tmp/scratch/RtmpAyF6XF’   ‘~/tmp/scratch/RtmpC489ii’ ‘~/tmp/scratch/RtmpDmAZe8’   ‘~/tmp/scratch/RtmpDqoOAz’ ‘~/tmp/scratch/RtmpDzBJ54’   ‘~/tmp/scratch/RtmpEIvfwD’ ‘~/tmp/scratch/RtmpEfGbO0’   ‘~/tmp/scratch/RtmpEscR5d’ ‘~/tmp/scratch/RtmpFmUylB’   ‘~/tmp/scratch/RtmpFqGivq’ ‘~/tmp/scratch/RtmpFxYMit’   ‘~/tmp/scratch/RtmpGzMUC1’ ‘~/tmp/scratch/RtmpHbHi2b’   ‘~/tmp/scratch/RtmpIdlaFk’ ‘~/tmp/scratch/RtmpJ0diWl’   ‘~/tmp/scratch/RtmpJM6M21’ ‘~/tmp/scratch/RtmpJZeQAb’   ‘~/tmp/scratch/RtmpKA6Jbh’ ‘~/tmp/scratch/RtmpKFu8UY’   ‘~/tmp/scratch/RtmpKeirbD’ ‘~/tmp/scratch/RtmpKjrZNL’   ‘~/tmp/scratch/RtmpL2AYrz’ ‘~/tmp/scratch/RtmpMpEXE9’   ‘~/tmp/scratch/RtmpNrzvp7’ ‘~/tmp/scratch/RtmpOXPjFI’   ‘~/tmp/scratch/RtmpP1bIbc’ ‘~/tmp/scratch/RtmpPaV8HD’   ‘~/tmp/scratch/RtmpRgkxsL’ ‘~/tmp/scratch/RtmpS94MzF’   ‘~/tmp/scratch/RtmpShXFOn’ ‘~/tmp/scratch/RtmpT5LULV’   ‘~/tmp/scratch/RtmpTAJ8Hy’ ‘~/tmp/scratch/RtmpTFHB8Z’   ‘~/tmp/scratch/RtmpTIly8M’ ‘~/tmp/scratch/RtmpTv3qBS’   ‘~/tmp/scratch/RtmpU1gsQm’ ‘~/tmp/scratch/RtmpUAGk3w’   ‘~/tmp/scratch/RtmpUu5iVH’ ‘~/tmp/scratch/RtmpUyagDi’   ‘~/tmp/scratch/RtmpWA8wf1’ ‘~/tmp/scratch/RtmpWFGaMh’   ‘~/tmp/scratch/RtmpX9s7GJ’ ‘~/tmp/scratch/RtmpY14qbG’   ‘~/tmp/scratch/RtmpZhNy46’ ‘~/tmp/scratch/RtmpZlpLpi’   ‘~/tmp/scratch/RtmpZnR9pi’ ‘~/tmp/scratch/Rtmpb9Lk1x’   ‘~/tmp/scratch/Rtmpbbuowg’ ‘~/tmp/scratch/Rtmpcf2e0P’   ‘~/tmp/scratch/RtmpddW4mK’ ‘~/tmp/scratch/RtmpdrArIt’   ‘~/tmp/scratch/RtmpeHPaL2’ ‘~/tmp/scratch/RtmpfEX4jX’   ‘~/tmp/scratch/RtmpgBMFan’ ‘~/tmp/scratch/Rtmpgj7uQz’   ‘~/tmp/scratch/Rtmph2FK8c’ ‘~/tmp/scratch/Rtmph4yBeG’   ‘~/tmp/scratch/RtmphRTg1S’ ‘~/tmp/scratch/RtmphqKx5l’   ‘~/tmp/scratch/Rtmpi0ICJS’ ‘~/tmp/scratch/RtmpiQko1L’   ‘~/tmp/scratch/Rtmpip3kpD’ ‘~/tmp/scratch/RtmpjWBz14’   ‘~/tmp/scratch/RtmpjuUOnN’ ‘~/tmp/scratch/RtmpkQ6jnW’   ‘~/tmp/scratch/RtmpkaD7mc’ ‘~/tmp/scratch/Rtmpn2F1C4’   ‘~/tmp/scratch/RtmpnRhhIQ’ ‘~/tmp/scratch/RtmppcILK5’   ‘~/tmp/scratch/RtmppnhqMT’ ‘~/tmp/scratch/RtmpptfWRj’   ‘~/tmp/scratch/RtmpqFizr1’ ‘~/tmp/scratch/RtmpqIgvK6’   ‘~/tmp/scratch/RtmprJDpVX’ ‘~/tmp/scratch/RtmprwGyNK’   ‘~/tmp/scratch/Rtmps9ptY2’ ‘~/tmp/scratch/RtmpsIINsS’   ‘~/tmp/scratch/RtmptG36If’ ‘~/tmp/scratch/RtmptGhZVU’   ‘~/tmp/scratch/Rtmptfs0Lv’ ‘~/tmp/scratch/RtmpuDQdPO’   ‘~/tmp/scratch/RtmpuEgteH’ ‘~/tmp/scratch/Rtmpuqu0tX’   ‘~/tmp/scratch/Rtmpuz8iXG’ ‘~/tmp/scratch/RtmpvLSel9’   ‘~/tmp/scratch/RtmpwwKMRh’ ‘~/tmp/scratch/RtmpxkBWpW’   ‘~/tmp/scratch/RtmpxrUPrw’ ‘~/tmp/scratch/Rtmpy7pLQB’   ‘~/tmp/scratch/RtmpymW7Az’ ‘~/tmp/scratch/RtmpzOcrsH’   ‘~/tmp/scratch/RtmpzlJopE’ ‘~/tmp/scratch/xvfb-run.3rkD40’   ‘~/tmp/scratch/xvfb-run.8hM4Je’ ‘~/tmp/scratch/xvfb-run.AWQSLW’   ‘~/tmp/scratch/xvfb-run.BsEUp9’ ‘~/tmp/scratch/xvfb-run.GAB1rW’   ‘~/tmp/scratch/xvfb-run.Gi0Zbe’ ‘~/tmp/scratch/xvfb-run.IeN3FY’   ‘~/tmp/scratch/xvfb-run.KsUr0l’ ‘~/tmp/scratch/xvfb-run.LZX8JJ’   ‘~/tmp/scratch/xvfb-run.NDkUcx’ ‘~/tmp/scratch/xvfb-run.OUhbCQ’   ‘~/tmp/scratch/xvfb-run.OzZVJw’ ‘~/tmp/scratch/xvfb-run.Q4oGQi’   ‘~/tmp/scratch/xvfb-run.Rn948B’ ‘~/tmp/scratch/xvfb-run.U47Scm’   ‘~/tmp/scratch/xvfb-run.VVkAAI’ ‘~/tmp/scratch/xvfb-run.WfPb5e’   ‘~/tmp/scratch/xvfb-run.Y4OsXK’ ‘~/tmp/scratch/xvfb-run.ZezLqS’   ‘~/tmp/scratch/xvfb-run.ZjbCp2’ ‘~/tmp/scratch/xvfb-run.cBZjym’   ‘~/tmp/scratch/xvfb-run.fUTGUg’ ‘~/tmp/scratch/xvfb-run.gKeQHH’   ‘~/tmp/scratch/xvfb-run.iKnyax’ ‘~/tmp/scratch/xvfb-run.nb368I’   ‘~/tmp/scratch/xvfb-run.oIWvMK’ ‘~/tmp/scratch/xvfb-run.orXRHN’   ‘~/tmp/scratch/xvfb-run.ozO3xq’ ‘~/tmp/scratch/xvfb-run.pn1rl6’   ‘~/tmp/scratch/xvfb-run.zCAylm’
• DONE

Status: 2 NOTEs