• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 17:45:09 UTC
• checking for file ‘sepkoski/DESCRIPTION’ ... OK
• this is package ‘sepkoski’ version ‘0.0.1’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/3s] NOTE Maintainer: ‘Lewis A. Jones <LewisA.Jones@outlook.com>’ Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead.
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘sepkoski’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [3s/4s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [1s/1s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking R/sysdata.rda ... OK
• checking examples ... [0s/1s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [1s/2s] OK   Running ‘testthat.R’ [1s/2s]
• checking PDF version of manual ... [4s/7s] OK
• checking HTML version of manual ... [0s/0s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0STMD2’ ‘~/tmp/scratch/Rtmp0dNJVg’   ‘~/tmp/scratch/Rtmp0jUY2D’ ‘~/tmp/scratch/Rtmp0kzWH1’   ‘~/tmp/scratch/Rtmp0l7V1d’ ‘~/tmp/scratch/Rtmp1RxOJw’   ‘~/tmp/scratch/Rtmp1ZM6OX’ ‘~/tmp/scratch/Rtmp2Tqljs’   ‘~/tmp/scratch/Rtmp2aIPft’ ‘~/tmp/scratch/Rtmp2b4c3p’   ‘~/tmp/scratch/Rtmp2brlEx’ ‘~/tmp/scratch/Rtmp2qbkDH’   ‘~/tmp/scratch/Rtmp366ZPC’ ‘~/tmp/scratch/Rtmp3HW9Ym’   ‘~/tmp/scratch/Rtmp3ZZpYg’ ‘~/tmp/scratch/Rtmp3g3r3q’   ‘~/tmp/scratch/Rtmp45Pr2v’ ‘~/tmp/scratch/Rtmp4dmt7z’   ‘~/tmp/scratch/Rtmp4fypRi’ ‘~/tmp/scratch/Rtmp5ROprU’   ‘~/tmp/scratch/Rtmp6235Rz’ ‘~/tmp/scratch/Rtmp6qzk1x’   ‘~/tmp/scratch/Rtmp78Bjnf’ ‘~/tmp/scratch/Rtmp7Rw1wN’   ‘~/tmp/scratch/Rtmp86WNhq’ ‘~/tmp/scratch/Rtmp8gUTcc’   ‘~/tmp/scratch/Rtmp8xmU3K’ ‘~/tmp/scratch/Rtmp9uXm4J’   ‘~/tmp/scratch/RtmpCNHoxO’ ‘~/tmp/scratch/RtmpCoV77M’   ‘~/tmp/scratch/RtmpEoffis’ ‘~/tmp/scratch/RtmpEsffCm’   ‘~/tmp/scratch/RtmpFlLK6I’ ‘~/tmp/scratch/RtmpGeQhMD’   ‘~/tmp/scratch/RtmpGhqcfa’ ‘~/tmp/scratch/RtmpGkxyuL’   ‘~/tmp/scratch/RtmpH82qMb’ ‘~/tmp/scratch/RtmpHfNzrn’   ‘~/tmp/scratch/RtmpI9iLeV’ ‘~/tmp/scratch/RtmpIUSS9Q’   ‘~/tmp/scratch/RtmpJhI9kx’ ‘~/tmp/scratch/RtmpLZY1lm’   ‘~/tmp/scratch/RtmpMCWKEp’ ‘~/tmp/scratch/RtmpNDi1ln’   ‘~/tmp/scratch/RtmpNesoWi’ ‘~/tmp/scratch/RtmpNu8cP2’   ‘~/tmp/scratch/RtmpO8cACM’ ‘~/tmp/scratch/RtmpOwxeFC’   ‘~/tmp/scratch/RtmpPEW245’ ‘~/tmp/scratch/RtmpPbuVLT’   ‘~/tmp/scratch/RtmpPcxzWk’ ‘~/tmp/scratch/RtmpQ3rWk3’   ‘~/tmp/scratch/RtmpQd7WDy’ ‘~/tmp/scratch/RtmpRVq5gD’   ‘~/tmp/scratch/RtmpSgZ4dv’ ‘~/tmp/scratch/RtmpSlc9b7’   ‘~/tmp/scratch/RtmpT7YAFh’ ‘~/tmp/scratch/RtmpVb0GmH’   ‘~/tmp/scratch/RtmpVbJnD6’ ‘~/tmp/scratch/RtmpVjFtsu’   ‘~/tmp/scratch/RtmpXBz7xD’ ‘~/tmp/scratch/RtmpXognes’   ‘~/tmp/scratch/RtmpXopEdO’ ‘~/tmp/scratch/RtmpYFi1Ue’   ‘~/tmp/scratch/RtmpZ75lev’ ‘~/tmp/scratch/RtmpZLHRWu’   ‘~/tmp/scratch/RtmpZzutQh’ ‘~/tmp/scratch/RtmpaSmhb6’   ‘~/tmp/scratch/Rtmpb3tUbs’ ‘~/tmp/scratch/Rtmpb9kIis’   ‘~/tmp/scratch/RtmpbqAgcl’ ‘~/tmp/scratch/RtmpevQgdO’   ‘~/tmp/scratch/RtmpfPN4yr’ ‘~/tmp/scratch/Rtmpfzy7hE’   ‘~/tmp/scratch/RtmpgD7YiO’ ‘~/tmp/scratch/RtmpggRMPK’   ‘~/tmp/scratch/RtmpgvhdRq’ ‘~/tmp/scratch/RtmphtqAlC’   ‘~/tmp/scratch/RtmpiHYev9’ ‘~/tmp/scratch/RtmpjlaucV’   ‘~/tmp/scratch/Rtmpk3A4cF’ ‘~/tmp/scratch/Rtmpk5ZhnK’   ‘~/tmp/scratch/RtmpoLfW3v’ ‘~/tmp/scratch/RtmpohdtKq’   ‘~/tmp/scratch/RtmppHrqNd’ ‘~/tmp/scratch/RtmppKjuMf’   ‘~/tmp/scratch/RtmppvCtvo’ ‘~/tmp/scratch/Rtmpq180SM’   ‘~/tmp/scratch/Rtmpq9dDXu’ ‘~/tmp/scratch/Rtmpr9qS6W’   ‘~/tmp/scratch/RtmprzDBJ5’ ‘~/tmp/scratch/RtmpsrYjZi’   ‘~/tmp/scratch/Rtmpt7yCKH’ ‘~/tmp/scratch/RtmptUiajJ’   ‘~/tmp/scratch/RtmptgqOaq’ ‘~/tmp/scratch/Rtmptk8YZK’   ‘~/tmp/scratch/Rtmptpracp’ ‘~/tmp/scratch/Rtmpv0Sm0x’   ‘~/tmp/scratch/RtmpvG7JFD’ ‘~/tmp/scratch/RtmpvMS9As’   ‘~/tmp/scratch/Rtmpw4S7vp’ ‘~/tmp/scratch/Rtmpw5VdNS’   ‘~/tmp/scratch/RtmpxAS4kk’ ‘~/tmp/scratch/RtmpxhnxHg’   ‘~/tmp/scratch/RtmpyeSV1g’ ‘~/tmp/scratch/RtmpzLyRHs’   ‘~/tmp/scratch/RtmpzidoWL’ ‘~/tmp/scratch/xvfb-run.1xhYUC’   ‘~/tmp/scratch/xvfb-run.3HfyrT’ ‘~/tmp/scratch/xvfb-run.4y6O36’   ‘~/tmp/scratch/xvfb-run.6Xz5nE’ ‘~/tmp/scratch/xvfb-run.8miL9y’   ‘~/tmp/scratch/xvfb-run.91UYOy’ ‘~/tmp/scratch/xvfb-run.CxH8ZK’   ‘~/tmp/scratch/xvfb-run.E0sGiu’ ‘~/tmp/scratch/xvfb-run.N5NsCH’   ‘~/tmp/scratch/xvfb-run.N7YxfY’ ‘~/tmp/scratch/xvfb-run.NC1WGW’   ‘~/tmp/scratch/xvfb-run.PgsWtr’ ‘~/tmp/scratch/xvfb-run.QePXmM’   ‘~/tmp/scratch/xvfb-run.REQlWL’ ‘~/tmp/scratch/xvfb-run.cmC8i1’   ‘~/tmp/scratch/xvfb-run.eqsmFZ’ ‘~/tmp/scratch/xvfb-run.f0s0v0’   ‘~/tmp/scratch/xvfb-run.s6goEi’ ‘~/tmp/scratch/xvfb-run.sVpuLC’   ‘~/tmp/scratch/xvfb-run.tsduJL’ ‘~/tmp/scratch/xvfb-run.vOJYYk’   ‘~/tmp/scratch/xvfb-run.vhwu8I’ ‘~/tmp/scratch/xvfb-run.wXJLU2’   ‘~/tmp/scratch/xvfb-run.xoX4UQ’ ‘~/tmp/scratch/xvfb-run.zS1YGz’   ‘~/tmp/scratch/xvfb-run.zxA8n1’
• DONE

Status: 2 NOTEs