• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 17:44:15 UTC
• checking for file ‘semEffect/DESCRIPTION’ ... OK
• this is package ‘semEffect’ version ‘1.2.3’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/1s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘semEffect’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [3s/4s] OK
• checking whether the package can be loaded with stated dependencies ... [3s/3s] OK
• checking whether the package can be unloaded cleanly ... [3s/3s] OK
• checking whether the namespace can be loaded with stated dependencies ... [4s/5s] OK
• checking whether the namespace can be unloaded cleanly ... [4s/4s] OK
• checking loading without being on the library search path ... [4s/6s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [16s/20s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking examples ... [4s/4s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [5s/6s] OK   Running ‘testthat.R’ [5s/5s]
• checking PDF version of manual ... [3s/6s] OK
• checking HTML version of manual ... [0s/0s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0bdD7P’ ‘~/tmp/scratch/Rtmp0fOr9p’   ‘~/tmp/scratch/Rtmp0p6IyK’ ‘~/tmp/scratch/Rtmp16QrH2’   ‘~/tmp/scratch/Rtmp1SGHWL’ ‘~/tmp/scratch/Rtmp1UIoiD’   ‘~/tmp/scratch/Rtmp25cVOb’ ‘~/tmp/scratch/Rtmp25y5Zz’   ‘~/tmp/scratch/Rtmp3euQyK’ ‘~/tmp/scratch/Rtmp4mV714’   ‘~/tmp/scratch/Rtmp5JfVIg’ ‘~/tmp/scratch/Rtmp5OevvH’   ‘~/tmp/scratch/Rtmp5RhYEj’ ‘~/tmp/scratch/Rtmp5a1BX1’   ‘~/tmp/scratch/Rtmp6JarwI’ ‘~/tmp/scratch/Rtmp6LgHRD’   ‘~/tmp/scratch/Rtmp78nhf6’ ‘~/tmp/scratch/Rtmp80xYUE’   ‘~/tmp/scratch/Rtmp83hiiS’ ‘~/tmp/scratch/Rtmp8K3ric’   ‘~/tmp/scratch/Rtmp9Aakt9’ ‘~/tmp/scratch/Rtmp9MwqT1’   ‘~/tmp/scratch/Rtmp9ReL0w’ ‘~/tmp/scratch/Rtmp9S7Iz2’   ‘~/tmp/scratch/Rtmp9XSvPz’ ‘~/tmp/scratch/Rtmp9ZwctG’   ‘~/tmp/scratch/RtmpA4oyhr’ ‘~/tmp/scratch/RtmpAJnlKs’   ‘~/tmp/scratch/RtmpB60ysW’ ‘~/tmp/scratch/RtmpBmrNEM’   ‘~/tmp/scratch/RtmpBsQtbd’ ‘~/tmp/scratch/RtmpC0Cdhy’   ‘~/tmp/scratch/RtmpCVp6Io’ ‘~/tmp/scratch/RtmpCcoGf6’   ‘~/tmp/scratch/RtmpCnzCdM’ ‘~/tmp/scratch/RtmpDL8Zb9’   ‘~/tmp/scratch/RtmpDf6byC’ ‘~/tmp/scratch/RtmpDzBJ54’   ‘~/tmp/scratch/RtmpEgRwrP’ ‘~/tmp/scratch/RtmpEqVmGR’   ‘~/tmp/scratch/RtmpEscR5d’ ‘~/tmp/scratch/RtmpFmUylB’   ‘~/tmp/scratch/RtmpFzf9er’ ‘~/tmp/scratch/RtmpGj4UFR’   ‘~/tmp/scratch/RtmpHbgxyL’ ‘~/tmp/scratch/RtmpHlPd3N’   ‘~/tmp/scratch/RtmpIm6Uhr’ ‘~/tmp/scratch/RtmpJ3obS8’   ‘~/tmp/scratch/RtmpJdlUPC’ ‘~/tmp/scratch/RtmpJetT0x’   ‘~/tmp/scratch/RtmpKEGa2c’ ‘~/tmp/scratch/RtmpMUB4ur’   ‘~/tmp/scratch/RtmpMhG236’ ‘~/tmp/scratch/RtmpMo1lp7’   ‘~/tmp/scratch/RtmpNdIQ8x’ ‘~/tmp/scratch/RtmpNim9Nn’   ‘~/tmp/scratch/RtmpNrzvp7’ ‘~/tmp/scratch/RtmpP7Wb4L’   ‘~/tmp/scratch/RtmpPKo5QS’ ‘~/tmp/scratch/RtmpQR1uEU’   ‘~/tmp/scratch/RtmpQd7po9’ ‘~/tmp/scratch/RtmpRgLzwi’   ‘~/tmp/scratch/RtmpRgkxsL’ ‘~/tmp/scratch/RtmpRv0VUa’   ‘~/tmp/scratch/RtmpRx9EKs’ ‘~/tmp/scratch/RtmpS94MzF’   ‘~/tmp/scratch/RtmpSA0vjf’ ‘~/tmp/scratch/RtmpSITFtT’   ‘~/tmp/scratch/RtmpSkHbgX’ ‘~/tmp/scratch/RtmpTIly8M’   ‘~/tmp/scratch/RtmpTv3qBS’ ‘~/tmp/scratch/RtmpUAGk3w’   ‘~/tmp/scratch/RtmpURVybc’ ‘~/tmp/scratch/RtmpUv0ln4’   ‘~/tmp/scratch/RtmpW98A7I’ ‘~/tmp/scratch/RtmpWA8wf1’   ‘~/tmp/scratch/RtmpWDrBlI’ ‘~/tmp/scratch/RtmpWFGaMh’   ‘~/tmp/scratch/RtmpWgzgOn’ ‘~/tmp/scratch/RtmpWsG0ik’   ‘~/tmp/scratch/RtmpXIEAY3’ ‘~/tmp/scratch/RtmpXX6nyW’   ‘~/tmp/scratch/RtmpY8qhgD’ ‘~/tmp/scratch/RtmpYB4PZn’   ‘~/tmp/scratch/RtmpYQ5FUO’ ‘~/tmp/scratch/RtmpYjtUZB’   ‘~/tmp/scratch/RtmpZXjsOw’ ‘~/tmp/scratch/RtmpZscEpM’   ‘~/tmp/scratch/Rtmpa0rOTw’ ‘~/tmp/scratch/RtmpaRwX7z’   ‘~/tmp/scratch/RtmpaTI3q8’ ‘~/tmp/scratch/RtmpaZ6iiu’   ‘~/tmp/scratch/RtmpakXzW9’ ‘~/tmp/scratch/RtmpancvQz’   ‘~/tmp/scratch/Rtmpaq3rSQ’ ‘~/tmp/scratch/RtmpbPe3P4’   ‘~/tmp/scratch/Rtmpbbuowg’ ‘~/tmp/scratch/RtmpcAGcTm’   ‘~/tmp/scratch/RtmpdMJVpm’ ‘~/tmp/scratch/RtmpdOBehX’   ‘~/tmp/scratch/RtmpdrArIt’ ‘~/tmp/scratch/RtmpdsDOiA’   ‘~/tmp/scratch/Rtmpe1mj84’ ‘~/tmp/scratch/RtmpeHPaL2’   ‘~/tmp/scratch/RtmpfEX4jX’ ‘~/tmp/scratch/RtmpfYkUkz’   ‘~/tmp/scratch/RtmpfkzYCz’ ‘~/tmp/scratch/Rtmpg6Ycka’   ‘~/tmp/scratch/Rtmpi0ICJS’ ‘~/tmp/scratch/Rtmpivootm’   ‘~/tmp/scratch/RtmpjSiNNC’ ‘~/tmp/scratch/RtmpjmDYNr’   ‘~/tmp/scratch/RtmpjpBXEv’ ‘~/tmp/scratch/RtmpjuUOnN’   ‘~/tmp/scratch/RtmpkCoZce’ ‘~/tmp/scratch/RtmpkZ6r6m’   ‘~/tmp/scratch/RtmpkaD7mc’ ‘~/tmp/scratch/RtmplF17bP’   ‘~/tmp/scratch/RtmplFDtxQ’ ‘~/tmp/scratch/RtmplWj8Nn’   ‘~/tmp/scratch/RtmplfS7sC’ ‘~/tmp/scratch/RtmpnJJLnF’   ‘~/tmp/scratch/Rtmpne2mjw’ ‘~/tmp/scratch/RtmpntsUFL’   ‘~/tmp/scratch/Rtmpo3ONVC’ ‘~/tmp/scratch/Rtmpo6KTEY’   ‘~/tmp/scratch/Rtmpobr2I6’ ‘~/tmp/scratch/RtmpojpuCb’   ‘~/tmp/scratch/RtmppcILK5’ ‘~/tmp/scratch/Rtmpq9C4j7’   ‘~/tmp/scratch/Rtmpr3OnaZ’ ‘~/tmp/scratch/Rtmpr5IJwX’   ‘~/tmp/scratch/RtmprJDpVX’ ‘~/tmp/scratch/RtmprKvbPI’   ‘~/tmp/scratch/RtmpsPYuBQ’ ‘~/tmp/scratch/RtmpsonA2T’   ‘~/tmp/scratch/RtmptGhZVU’ ‘~/tmp/scratch/RtmptkpKFX’   ‘~/tmp/scratch/Rtmpu63CmP’ ‘~/tmp/scratch/RtmpuWTQsg’   ‘~/tmp/scratch/RtmpvLSel9’ ‘~/tmp/scratch/RtmpwSAaEr’   ‘~/tmp/scratch/RtmpwiDM4T’ ‘~/tmp/scratch/RtmpwjQ23F’   ‘~/tmp/scratch/Rtmpwlx7vt’ ‘~/tmp/scratch/RtmpwpEbWU’   ‘~/tmp/scratch/RtmpwxMBi1’ ‘~/tmp/scratch/Rtmpx6b5Cy’   ‘~/tmp/scratch/RtmpxAOQ0i’ ‘~/tmp/scratch/RtmpxL0UUl’   ‘~/tmp/scratch/RtmpxkBWpW’ ‘~/tmp/scratch/RtmpymW7Az’   ‘~/tmp/scratch/Rtmpzhe3s3’ ‘~/tmp/scratch/RtmpzvC1TN’   ‘~/tmp/scratch/xvfb-run.1PVe22’ ‘~/tmp/scratch/xvfb-run.1YBU3d’   ‘~/tmp/scratch/xvfb-run.1qsdqO’ ‘~/tmp/scratch/xvfb-run.24gdiW’   ‘~/tmp/scratch/xvfb-run.304nvb’ ‘~/tmp/scratch/xvfb-run.3rn0h7’   ‘~/tmp/scratch/xvfb-run.636qtW’ ‘~/tmp/scratch/xvfb-run.6nR3vt’   ‘~/tmp/scratch/xvfb-run.7rnkpx’ ‘~/tmp/scratch/xvfb-run.8p9ND9’   ‘~/tmp/scratch/xvfb-run.AWQSLW’ ‘~/tmp/scratch/xvfb-run.Byxztf’   ‘~/tmp/scratch/xvfb-run.C50b3D’ ‘~/tmp/scratch/xvfb-run.ExxCV4’   ‘~/tmp/scratch/xvfb-run.Frogqd’ ‘~/tmp/scratch/xvfb-run.GBb2HW’   ‘~/tmp/scratch/xvfb-run.Gi0Zbe’ ‘~/tmp/scratch/xvfb-run.IeN3FY’   ‘~/tmp/scratch/xvfb-run.MDZo7F’ ‘~/tmp/scratch/xvfb-run.NDkUcx’   ‘~/tmp/scratch/xvfb-run.OUhbCQ’ ‘~/tmp/scratch/xvfb-run.OzZVJw’   ‘~/tmp/scratch/xvfb-run.PIcecW’ ‘~/tmp/scratch/xvfb-run.Pdsq4d’   ‘~/tmp/scratch/xvfb-run.PkHDN1’ ‘~/tmp/scratch/xvfb-run.Q4oGQi’   ‘~/tmp/scratch/xvfb-run.Q8bgE6’ ‘~/tmp/scratch/xvfb-run.UwVLyO’   ‘~/tmp/scratch/xvfb-run.VVkAAI’ ‘~/tmp/scratch/xvfb-run.WM93nn’   ‘~/tmp/scratch/xvfb-run.WlPOy0’ ‘~/tmp/scratch/xvfb-run.Wr6Fvr’   ‘~/tmp/scratch/xvfb-run.Y4OsXK’ ‘~/tmp/scratch/xvfb-run.ZezLqS’   ‘~/tmp/scratch/xvfb-run.ZjbCp2’ ‘~/tmp/scratch/xvfb-run.aYdx8p’   ‘~/tmp/scratch/xvfb-run.cBZjym’ ‘~/tmp/scratch/xvfb-run.cd4Kt0’   ‘~/tmp/scratch/xvfb-run.gKeQHH’ ‘~/tmp/scratch/xvfb-run.gWBJJj’   ‘~/tmp/scratch/xvfb-run.iKnyax’ ‘~/tmp/scratch/xvfb-run.jaUNgN’   ‘~/tmp/scratch/xvfb-run.k1dUec’ ‘~/tmp/scratch/xvfb-run.kQh7JV’   ‘~/tmp/scratch/xvfb-run.kYubYD’ ‘~/tmp/scratch/xvfb-run.kZFTmP’   ‘~/tmp/scratch/xvfb-run.lHFWUB’ ‘~/tmp/scratch/xvfb-run.nb368I’   ‘~/tmp/scratch/xvfb-run.oIWvMK’ ‘~/tmp/scratch/xvfb-run.ozO3xq’   ‘~/tmp/scratch/xvfb-run.pn1rl6’ ‘~/tmp/scratch/xvfb-run.tzqSpt’   ‘~/tmp/scratch/xvfb-run.uHA0eV’ ‘~/tmp/scratch/xvfb-run.vBjqis’   ‘~/tmp/scratch/xvfb-run.wfsGtN’ ‘~/tmp/scratch/xvfb-run.xRaIUM’   ‘~/tmp/scratch/xvfb-run.xZBM7o’ ‘~/tmp/scratch/xvfb-run.xu2Sey’   ‘~/tmp/scratch/xvfb-run.zI5vdA’
• DONE

Status: 1 NOTE