* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’ * installing *source* package ‘secsse’ ... ** this is package ‘secsse’ version ‘3.1.0’ ** package ‘secsse’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ using C++17 make[1]: Entering directory '/tmp/RtmpotJcBI/R.INSTALLc53562501a31f/secsse/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c secsse_eval.cpp -o secsse_eval.o In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/serialization/array.hpp:26, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25, from odeint.h:12, from secsse_loglik.h:13, from secsse_eval.cpp:13: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/tbb/tbb.h:32, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/RcppParallel/TBB.h:10, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/RcppParallel.h:24, from secsse_eval.cpp:12: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/tbb/atomic.h: In instantiation of ‘tbb::atomic& tbb::internal::as_atomic(T&) [with T = long unsigned int]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/tbb/tbb_thread.h:251:29: required from here 251 | return as_atomic(location.my_id).compare_and_swap(value.my_id, comparand.my_id); | ~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/tbb/atomic.h:544:12: warning: casting ‘long unsigned int’ to ‘tbb::atomic&’ does not use ‘constexpr tbb::atomic::atomic(long unsigned int)’ [-Wcast-user-defined] 544 | return (atomic&)t; | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/tbb/atomic.h: In instantiation of ‘tbb::atomic& tbb::internal::as_atomic(T&) [with T = tbb::interface5::internal::hash_map_base::bucket*]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/tbb/concurrent_hash_map.h:291:31: required from here 291 | && as_atomic(my_table[new_seg]).compare_and_swap(is_allocating, NULL) == NULL ) | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/tbb/atomic.h:544:12: warning: casting ‘tbb::interface5::internal::hash_map_base::bucket*’ to ‘tbb::atomic&’ does not use ‘constexpr tbb::atomic::atomic(T*) [with T = tbb::interface5::internal::hash_map_base::bucket]’ [-Wcast-user-defined] 544 | return (atomic&)t; | ^~~~~~~~~~~~~ In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/assert.hpp:35, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:20, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:19, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/size_type.hpp:20, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/size.hpp:21, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/functions.hpp:20, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range.hpp:18, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/resize.hpp:24, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/state_wrapper.hpp:26, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:33: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ 125 | struct IncrementableIteratorConcept : CopyConstructible | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:31: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::CopyConstructible<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/iterator/iterator_concepts.hpp:114:7: [ skipping 23 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::Convertible]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/iterator/iterator_concepts.hpp:114:7: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::EqualityComparable<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:152:13: [ skipping 22 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::Convertible]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:152:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:278:9: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:278:9: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:278:9: required from ‘struct boost::SinglePassRangeConcept >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/algorithm/equal.hpp:174:13: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept::~SinglePassIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/algorithm/equal.hpp:174:13: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::SinglePassRangeConcept >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::SinglePassRangeConcept >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/algorithm/equal.hpp:174:13: required from ‘OutputIterator boost::range::copy(const SinglePassRange&, OutputIterator) [with SinglePassRange = std::vector; OutputIterator = __gnu_cxx::__normal_iterator >]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/copy.hpp:38:27: required from ‘void boost::numeric::odeint::detail::do_copying(const Container1&, Container2&, std::integral_constant) [with Container1 = std::vector; Container2 = std::vector]’ 38 | boost::range::copy( from , boost::begin( to ) ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/copy.hpp:61:27: required from ‘static void boost::numeric::odeint::copy_impl_sfinae::copy(const Container1&, Container2&) [with Container1 = std::vector; Container2 = std::vector; Enabler = void]’ 61 | detail::do_copying( from , to , is_range_type() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/copy.hpp:71:58: required from ‘static void boost::numeric::odeint::copy_impl::copy(const Container1&, Container2&) [with Container1 = std::vector; Container2 = std::vector]’ 71 | copy_impl_sfinae< Container1 , Container2 >::copy( from , to ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/copy.hpp:79:47: required from ‘void boost::numeric::odeint::copy(const Container1&, Container2&) [with Container1 = std::vector; Container2 = std::vector]’ 79 | copy_impl< Container1 , Container2 >::copy( from , to ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/stepper/controlled_runge_kutta.hpp:344:41: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::SinglePassRangeConcept::~SinglePassRangeConcept() [with T = const std::vector]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ 125 | struct IncrementableIteratorConcept : CopyConstructible | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::CopyConstructible<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 20 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 20 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::EqualityComparable<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:278:9: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:278:9: required from ‘struct boost::SinglePassRangeConcept >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/size.hpp:62:9: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept::~SinglePassIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/size.hpp:62:9: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::SinglePassRangeConcept >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::SinglePassRangeConcept >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/size.hpp:62:9: required from ‘typename boost::range_size::type boost::size(const SinglePassRange&) [with SinglePassRange = std::vector; typename range_size::type = long unsigned int]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/same_size.hpp:45:29: required from ‘static bool boost::numeric::odeint::same_size_impl_sfinae::same_size(const State1&, const State2&) [with State1 = std::vector; State2 = std::vector; Enabler = void]’ 45 | return ( boost::size( x1 ) == boost::size( x2 ) ); | ~~~~~~~~~~~^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/same_size.hpp:57:67: required from ‘static bool boost::numeric::odeint::same_size_impl::same_size(const State1&, const State2&) [with State1 = std::vector; State2 = std::vector]’ 57 | return same_size_impl_sfinae< State1 , State2 >::same_size( x1 , x2 ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/same_size.hpp:66:56: required from ‘bool boost::numeric::odeint::same_size(const State1&, const State2&) [with State1 = std::vector; State2 = std::vector]’ 66 | return same_size_impl< State1 , State2 >::same_size( x1 , x2 ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/resizer.hpp:34:20: required from ‘bool boost::numeric::odeint::adjust_size_by_resizeability(ResizeWrappedState&, const State&, std::true_type) [with ResizeWrappedState = state_wrapper, void>; State = std::vector; std::true_type = std::true_type]’ 34 | if ( !same_size( x.m_v , y ) ) | ~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/stepper/controlled_runge_kutta.hpp:495:44: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::SinglePassRangeConcept::~SinglePassRangeConcept() [with T = std::vector]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::CopyConstructible<__gnu_cxx::__normal_iterator > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ 125 | struct IncrementableIteratorConcept : CopyConstructible | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: [ skipping 20 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::CopyConstructible::~CopyConstructible() [with TT = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:167:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 167 | BOOST_CONCEPT_USAGE(CopyConstructible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 24 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::IncrementableIteratorConcept::~IncrementableIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:136:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 136 | BOOST_CONCEPT_USAGE(IncrementableIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::EqualityComparable<__gnu_cxx::__normal_iterator > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::EqualityComparable::~EqualityComparable() [with TT = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:233:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 233 | BOOST_CONCEPT_USAGE(EqualityComparable) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 23 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept::~SinglePassIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::SinglePassRangeConcept >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::SinglePassRangeConcept::~SinglePassRangeConcept() [with T = const std::vector]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::CopyConstructible<__gnu_cxx::__normal_iterator > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ 125 | struct IncrementableIteratorConcept : CopyConstructible | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: [ skipping 22 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::CopyConstructible::~CopyConstructible() [with TT = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:167:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 167 | BOOST_CONCEPT_USAGE(CopyConstructible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::IncrementableIteratorConcept::~IncrementableIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:136:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 136 | BOOST_CONCEPT_USAGE(IncrementableIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::EqualityComparable<__gnu_cxx::__normal_iterator > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::EqualityComparable::~EqualityComparable() [with TT = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:233:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 233 | BOOST_CONCEPT_USAGE(EqualityComparable) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 20 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept::~SinglePassIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::SinglePassRangeConcept >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = secsse::ode_standard*; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.h:197:27: required from ‘void secsse::Integrator::do_integrate(std::vector&, double, double, double) const [with ODE = secsse::ode_standard]’ 197 | odeintcpp::integrate(method_, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 198 | od_.get(), | ~~~~~~~~~~ 199 | &state, | ~~~~~~~ 200 | t0, | ~~~ 201 | t1, | ~~~ 202 | dtf * (t1 - t0), | ~~~~~~~~~~~~~~~~ 203 | atol_, | ~~~~~~ 204 | rtol_); | ~~~~~~ secsse_loglik.h:181:7: required from ‘void secsse::Integrator::operator()(std::vector&, double, double) const [with ODE = secsse::ode_standard]’ 181 | do_integrate(state, t0, t1, SECSSE_DEFAULT_DTF); | ^~~~~~~~~~~~ secsse_loglik.h:242:15: required from ‘secsse::calc_ll_res secsse::calc_ll(const INTEGRATOR&, inodes_t&, std::vector >&) [with INTEGRATOR = Integrator >; inodes_t = std::vector >]’ 242 | integrator(node_M, 0.0, root_node.desc[1].time); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:41:12: required from ‘Rcpp::List secsse::eval(std::unique_ptr<_Tp>, const Rcpp::IntegerVector&, const Rcpp::NumericMatrix&, const Rcpp::NumericMatrix&, const std::string&, double, double, size_t) [with ODE = ode_standard; Rcpp::List = Rcpp::Vector<19>; Rcpp::IntegerVector = Rcpp::Vector<13>; Rcpp::NumericMatrix = Rcpp::Matrix<14>; std::string = std::__cxx11::basic_string; size_t = long unsigned int]’ 41 | calc_ll(integrator, inodes, tstates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ secsse_eval.cpp:113:13: required from here 113 | ? eval(std::make_unique>(ll, mus, Q), ances, states, forTime, method, atol, rtol, num_steps) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::SinglePassRangeConcept::~SinglePassRangeConcept() [with T = std::vector]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept) | ^~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c secsse_loglik.cpp -o secsse_loglik.o In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/serialization/array.hpp:26, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25, from odeint.h:12, from secsse_loglik.h:13, from secsse_loglik.cpp:14: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/tbb/tbb.h:32, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/RcppParallel/TBB.h:10, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/RcppParallel.h:24, from secsse_loglik.cpp:13: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/tbb/atomic.h: In instantiation of ‘tbb::atomic& tbb::internal::as_atomic(T&) [with T = long unsigned int]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/tbb/tbb_thread.h:251:29: required from here 251 | return as_atomic(location.my_id).compare_and_swap(value.my_id, comparand.my_id); | ~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/tbb/atomic.h:544:12: warning: casting ‘long unsigned int’ to ‘tbb::atomic&’ does not use ‘constexpr tbb::atomic::atomic(long unsigned int)’ [-Wcast-user-defined] 544 | return (atomic&)t; | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/tbb/atomic.h: In instantiation of ‘tbb::atomic& tbb::internal::as_atomic(T&) [with T = tbb::interface5::internal::hash_map_base::bucket*]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/tbb/concurrent_hash_map.h:291:31: required from here 291 | && as_atomic(my_table[new_seg]).compare_and_swap(is_allocating, NULL) == NULL ) | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/tbb/atomic.h:544:12: warning: casting ‘tbb::interface5::internal::hash_map_base::bucket*’ to ‘tbb::atomic&’ does not use ‘constexpr tbb::atomic::atomic(T*) [with T = tbb::interface5::internal::hash_map_base::bucket]’ [-Wcast-user-defined] 544 | return (atomic&)t; | ^~~~~~~~~~~~~ In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/assert.hpp:35, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:20, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:19, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/size_type.hpp:20, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/size.hpp:21, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/functions.hpp:20, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range.hpp:18, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/resize.hpp:24, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/state_wrapper.hpp:26, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:33: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ 125 | struct IncrementableIteratorConcept : CopyConstructible | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:31: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::CopyConstructible<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/iterator/iterator_concepts.hpp:114:7: [ skipping 20 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::Convertible]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/iterator/iterator_concepts.hpp:114:7: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::EqualityComparable<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:152:13: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::Convertible]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:152:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:278:9: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:278:9: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:278:9: required from ‘struct boost::SinglePassRangeConcept >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/algorithm/equal.hpp:174:13: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept::~SinglePassIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/algorithm/equal.hpp:174:13: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::SinglePassRangeConcept >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::SinglePassRangeConcept >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/algorithm/equal.hpp:174:13: required from ‘OutputIterator boost::range::copy(const SinglePassRange&, OutputIterator) [with SinglePassRange = std::vector; OutputIterator = __gnu_cxx::__normal_iterator >]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/copy.hpp:38:27: required from ‘void boost::numeric::odeint::detail::do_copying(const Container1&, Container2&, std::integral_constant) [with Container1 = std::vector; Container2 = std::vector]’ 38 | boost::range::copy( from , boost::begin( to ) ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/copy.hpp:61:27: required from ‘static void boost::numeric::odeint::copy_impl_sfinae::copy(const Container1&, Container2&) [with Container1 = std::vector; Container2 = std::vector; Enabler = void]’ 61 | detail::do_copying( from , to , is_range_type() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/copy.hpp:71:58: required from ‘static void boost::numeric::odeint::copy_impl::copy(const Container1&, Container2&) [with Container1 = std::vector; Container2 = std::vector]’ 71 | copy_impl_sfinae< Container1 , Container2 >::copy( from , to ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/copy.hpp:79:47: required from ‘void boost::numeric::odeint::copy(const Container1&, Container2&) [with Container1 = std::vector; Container2 = std::vector]’ 79 | copy_impl< Container1 , Container2 >::copy( from , to ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/stepper/controlled_runge_kutta.hpp:344:41: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::SinglePassRangeConcept::~SinglePassRangeConcept() [with T = const std::vector]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ 125 | struct IncrementableIteratorConcept : CopyConstructible | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::CopyConstructible<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::EqualityComparable<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:278:9: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:278:9: required from ‘struct boost::SinglePassRangeConcept >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/size.hpp:62:9: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept::~SinglePassIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/size.hpp:62:9: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::SinglePassRangeConcept >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::SinglePassRangeConcept >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/size.hpp:62:9: required from ‘typename boost::range_size::type boost::size(const SinglePassRange&) [with SinglePassRange = std::vector; typename range_size::type = long unsigned int]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/same_size.hpp:45:29: required from ‘static bool boost::numeric::odeint::same_size_impl_sfinae::same_size(const State1&, const State2&) [with State1 = std::vector; State2 = std::vector; Enabler = void]’ 45 | return ( boost::size( x1 ) == boost::size( x2 ) ); | ~~~~~~~~~~~^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/same_size.hpp:57:67: required from ‘static bool boost::numeric::odeint::same_size_impl::same_size(const State1&, const State2&) [with State1 = std::vector; State2 = std::vector]’ 57 | return same_size_impl_sfinae< State1 , State2 >::same_size( x1 , x2 ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/same_size.hpp:66:56: required from ‘bool boost::numeric::odeint::same_size(const State1&, const State2&) [with State1 = std::vector; State2 = std::vector]’ 66 | return same_size_impl< State1 , State2 >::same_size( x1 , x2 ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/util/resizer.hpp:34:20: required from ‘bool boost::numeric::odeint::adjust_size_by_resizeability(ResizeWrappedState&, const State&, std::true_type) [with ResizeWrappedState = state_wrapper, void>; State = std::vector; std::true_type = std::true_type]’ 34 | if ( !same_size( x.m_v , y ) ) | ~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/stepper/controlled_runge_kutta.hpp:495:44: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::SinglePassRangeConcept::~SinglePassRangeConcept() [with T = std::vector]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::CopyConstructible<__gnu_cxx::__normal_iterator > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ 125 | struct IncrementableIteratorConcept : CopyConstructible | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::CopyConstructible::~CopyConstructible() [with TT = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:167:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 167 | BOOST_CONCEPT_USAGE(CopyConstructible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::IncrementableIteratorConcept::~IncrementableIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:136:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 136 | BOOST_CONCEPT_USAGE(IncrementableIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::EqualityComparable<__gnu_cxx::__normal_iterator > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::EqualityComparable::~EqualityComparable() [with TT = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:233:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 233 | BOOST_CONCEPT_USAGE(EqualityComparable) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 20 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept::~SinglePassIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::SinglePassRangeConcept >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::SinglePassRangeConcept::~SinglePassRangeConcept() [with T = const std::vector]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::CopyConstructible<__gnu_cxx::__normal_iterator > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ 125 | struct IncrementableIteratorConcept : CopyConstructible | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::CopyConstructible::~CopyConstructible() [with TT = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:167:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 167 | BOOST_CONCEPT_USAGE(CopyConstructible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::IncrementableIteratorConcept::~IncrementableIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:136:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 136 | BOOST_CONCEPT_USAGE(IncrementableIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::EqualityComparable<__gnu_cxx::__normal_iterator > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::EqualityComparable::~EqualityComparable() [with TT = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept_check.hpp:233:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 233 | BOOST_CONCEPT_USAGE(EqualityComparable) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept::~SinglePassIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::SinglePassRangeConcept >]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:40:38: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time, Observer) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; Observer = null_observer; size_t = long unsigned int]’ 40 | return detail::integrate_adaptive( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 41 | stepper , system , start_state , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 | start_time , end_time , dt , | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 | observer , stepper_category() ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/numeric/odeint/integrate/integrate_adaptive.hpp:81:30: required from ‘size_t boost::numeric::odeint::integrate_adaptive(Stepper, System, State&, Time, Time, Time) [with Stepper = controlled_runge_kutta, double, std::vector, double, range_algebra, default_operations, initially_resizer>, default_error_checker, default_step_adjuster, initially_resizer, explicit_error_stepper_tag>; System = std::reference_wrapper >; State = std::vector; Time = double; size_t = long unsigned int]’ 81 | return integrate_adaptive( stepper , system , start_state , start_time , end_time , dt , null_observer() ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:48:28: required from ‘void odeintcpp::integrate(STEPPER&&, ODE&, STATE*, double, double, double) [with STEPPER = boost::numeric::odeint::controlled_runge_kutta, double, std::vector, double, boost::numeric::odeint::range_algebra, boost::numeric::odeint::default_operations, boost::numeric::odeint::initially_resizer>, boost::numeric::odeint::default_error_checker, boost::numeric::odeint::default_step_adjuster, boost::numeric::odeint::initially_resizer, boost::numeric::odeint::explicit_error_stepper_tag>; ODE = secsse::ode_standard; STATE = std::vector]’ 48 | bno::integrate_adaptive(stepper, std::ref(ode), (*y), | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 | time_type{t0}, time_type{t1}, time_type{dt}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ odeint.h:77:16: required from ‘void odeintcpp::integrate(const std::string&, ODE, STATE*, double, double, double, double, double) [with STATE = std::vector; ODE = std::unique_ptr, std::default_delete > >; std::string = std::__cxx11::basic_string]’ 77 | integrate(bno::make_controlled>(atol, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | rtol), | ~~~~~~ 79 | *ode, y, t0, t1, dt); | ~~~~~~~~~~~~~~~~~~~~ secsse_loglik.cpp:76:25: required from ‘Rcpp::NumericVector secsse::ct_condition(std::unique_ptr<_Tp>, const Rcpp::NumericVector&, double, const std::string&, double, double) [with ODE = ode_standard; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; std::string = std::__cxx11::basic_string]’ 76 | odeintcpp::integrate(method, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 77 | std::move(od), | ~~~~~~~~~~~~~~ 78 | &init_state, // state vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | 0.0, // t0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | t, // t1 | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 | t * 0.01, | ~~~~~~~~~ 82 | atol, | ~~~~~ 83 | rtol); | ~~~~~ secsse_loglik.cpp:136:24: required from here 136 | return ct_condition(std::make_unique>(ll, mus, Q), state, t, method, atol, rtol); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::SinglePassRangeConcept::~SinglePassRangeConcept() [with T = std::vector]’ 37 | ~model() | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept) | ^~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/BH/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c secsse_sim.cpp -o secsse_sim.o In file included from secsse_sim.cpp:10: secsse_sim2.h: In member function ‘void secsse_sim::run()’: secsse_sim2.h:273:47: warning: comparison of integer expressions of different signedness: ‘std::array::value_type’ {aka ‘int’} and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 273 | if (track_crowns[0] + track_crowns[1] >= max_spec) { g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o secsse.so RcppExports.o secsse_eval.o secsse_loglik.o secsse_sim.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR make[1]: Leaving directory '/tmp/RtmpotJcBI/R.INSTALLc53562501a31f/secsse/src' make[1]: Entering directory '/tmp/RtmpotJcBI/R.INSTALLc53562501a31f/secsse/src' make[1]: Leaving directory '/tmp/RtmpotJcBI/R.INSTALLc53562501a31f/secsse/src' installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-secsse/00new/secsse/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (secsse)