• using R Under development (unstable) (2025-12-19 r89206)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-15 (Debian 15.2.0-11) 15.2.0     GNU Fortran (Debian 15.2.0-11) 15.2.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8
• checking for file ‘rqdatatable/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘rqdatatable’ version ‘1.3.3’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘rqdatatable’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/1s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
• checking loading without being on the library search path ... [0s/1s] OK
• checking whether startup messages can be suppressed ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [4s/5s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [1s/1s] ERROR Running examples in ‘rqdatatable-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: ex_data_table_step.relop_extend > ### Title: Implement extend/assign operator. > ### Aliases: ex_data_table_step.relop_extend > > ### ** Examples > > > dL <- build_frame( + "subjectID", "surveyCategory" , "assessmentTotal", "one" | + 1 , "withdrawal behavior", 5 , 1 | + 1 , "positive re-framing", 2 , 1 | + 2 , "withdrawal behavior", 3 , 1 | + 2 , "positive re-framing", 4 , 1 ) > rquery_pipeline <- local_td(dL) %.>% + extend_nse(., + probability %:=% + exp(assessmentTotal * 0.237)/ + sum(exp(assessmentTotal * 0.237)), + count %:=% sum(one), + rank %:=% rank(), + orderby = c("assessmentTotal", "surveyCategory"), + reverse = c("assessmentTotal"), + partitionby = 'subjectID') %.>% + orderby(., c("subjectID", "probability")) > dL %.>% rquery_pipeline Error in `[.data.table`(.rquery_ex_extend_tmp, , `:=`(c("probability", :   attempt access index 5/5 in VECTOR_ELT Calls: %.>% ... ex_data_table_step.relop_extend -> eval -> eval -> [ -> [.data.table Execution halted
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [1s/2s] ERROR   Running ‘tinytest.R’ [1s/1s] Running the tests in ‘tests/tinytest.R’ failed. Complete output:   >   > if ( requireNamespace("tinytest", quietly=TRUE) ){   + tinytest::test_package("rqdatatable")   + }   Loading required package: wrapr      Attaching package: 'wrapr'      The following object is masked from 'package:base':          grepv      Loading required package: rquery      test_assoc.R.................. 0 tests   test_assoc.R.................. 7 tests [0;32mOK [0m [0;34m0.2s [0m      test_colon.R.................. 0 tests   test_colon.R.................. 1 tests [0;32mOK [0m [0;36m6ms [0m      test_cross_join.R............. 0 tests   test_cross_join.R............. 1 tests [0;32mOK [0m [0;36m17ms [0m      test_d_bind_frames.R.......... 0 tests   test_d_bind_frames.R.......... 4 tests [0;32mOK [0m [0;36m3ms [0m      test_degenerate_project.R..... 0 tests   test_degenerate_project.R..... 0 tests   test_degenerate_project.R..... 0 tests   test_degenerate_project.R..... 1 tests [0;32mOK [0m   test_degenerate_project.R..... 1 tests [0;32mOK [0m   test_degenerate_project.R..... 1 tests [0;32mOK [0m [0;36m21ms [0m      test_df_types.R............... 0 tests   test_df_types.R............... 4 tests [0;32mOK [0m [0;36m11ms [0m      test_distinct.R............... 0 tests   test_distinct.R............... 1 tests [0;32mOK [0m [0;36m9ms [0m      test_dotdotdot_issue.R........ 0 tests   test_dotdotdot_issue.R........ 0 tests [0;36m13ms [0m      test_dt_exports.R............. 0 tests   test_dt_exports.R............. 3 tests [0;32mOK [0m [0;36m19ms [0m      test_dtmsg.R.................. 0 tests   test_dtmsg.R.................. 0 tests [0;36m13ms [0m      test_ex_pipe.R................ 0 tests   test_ex_pipe.R................ 2 tests [0;32mOK [0m [0;36m10ms [0m      test_execute_parallel.R....... 0 tests Error in `[.data.table`(.rquery_ex_extend_tmp, , `:=`(c("row_number"), :     attempt access index 6/6 in VECTOR_ELT   Calls: <Anonymous> ... ex_data_table_step.relop_extend -> eval -> eval -> [ -> [.data.table   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [3s/4s] ERROR Error(s) in re-building vignettes:   ... --- re-building ‘GroupedSampling.Rmd’ using rmarkdown Quitting from GroupedSampling.Rmd:17-41 [unnamed-chunk-1] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `[.data.table`: ! attempt access index 7/7 in VECTOR_ELT --- Backtrace:     ▆  1. └─rqdatatable::ex_data_table(sample_ops)  2. ├─rqdatatable::ex_data_table_step(...)  3. └─rqdatatable:::ex_data_table_step.relop_select_rows(...)  4. ├─rqdatatable::ex_data_table_step(...)  5. └─rqdatatable:::ex_data_table_step.relop_extend(...)  6. └─base::eval(expr, envir = tmpenv, enclos = tmpenv)  7. └─base::eval(expr, envir = tmpenv, enclos = tmpenv)  8. ├─...[]  9. └─data.table:::`[.data.table`(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'GroupedSampling.Rmd' failed with diagnostics: attempt access index 7/7 in VECTOR_ELT --- failed re-building ‘GroupedSampling.Rmd’ --- re-building ‘R_mapping.Rmd’ using rmarkdown Quitting from R_mapping.Rmd:14-40 [unnamed-chunk-1] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `[.data.table`: ! attempt access index 4/4 in VECTOR_ELT --- Backtrace:     ▆  1. └─rqdatatable::ex_data_table(rquery_pipeline, tables = list(dL = dL))  2. ├─rqdatatable::ex_data_table_step(...)  3. └─rqdatatable:::ex_data_table_step.relop_orderby(...)  4. ├─rqdatatable::ex_data_table_step(...)  5. └─rqdatatable:::ex_data_table_step.relop_extend(...)  6. └─base::eval(expr, envir = tmpenv, enclos = tmpenv)  7. └─base::eval(expr, envir = tmpenv, enclos = tmpenv)  8. ├─...[]  9. └─data.table:::`[.data.table`(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'R_mapping.Rmd' failed with diagnostics: attempt access index 4/4 in VECTOR_ELT --- failed re-building ‘R_mapping.Rmd’ --- re-building ‘logisticexample.Rmd’ using rmarkdown Quitting from logisticexample.Rmd:67-69 [unnamed-chunk-5] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `[.data.table`: ! attempt access index 4/4 in VECTOR_ELT --- Backtrace:      ▆   1. └─rqdatatable::ex_data_table(rquery_pipeline)   2. ├─rqdatatable::ex_data_table_step(...)   3. └─rqdatatable:::ex_data_table_step.relop_orderby(...)   4. ├─rqdatatable::ex_data_table_step(...)   5. └─rqdatatable:::ex_data_table_step.relop_select_columns(...)   6. ├─rqdatatable::ex_data_table_step(...)   7. └─rqdatatable:::ex_data_table_step.relop_select_rows(...)   8. ├─rqdatatable::ex_data_table_step(...)   9. └─rqdatatable:::ex_data_table_step.relop_extend(...)  10. ├─rqdatatable::ex_data_table_step(...)  11. └─rqdatatable:::ex_data_table_step.relop_extend(...)  12. ├─rqdatatable::ex_data_table_step(...)  13. └─rqdatatable:::ex_data_table_step.relop_extend(...)  14. └─base::eval(expr, envir = tmpenv, enclos = tmpenv)  15. └─base::eval(expr, envir = tmpenv, enclos = tmpenv)  16. ├─...[]  17. └─data.table:::`[.data.table`(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'logisticexample.Rmd' failed with diagnostics: attempt access index 4/4 in VECTOR_ELT --- failed re-building ‘logisticexample.Rmd’ SUMMARY: processing the following files failed:   ‘GroupedSampling.Rmd’ ‘R_mapping.Rmd’ ‘logisticexample.Rmd’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [4s/5s] OK
• checking HTML version of manual ... [1s/3s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 3 ERRORs