• using R Under development (unstable) (2024-09-10 r87115)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-14 (Debian 14.2.0-3) 14.2.0     GNU Fortran (Debian 14.2.0-3) 14.2.0
• running under: Debian GNU/Linux trixie/sid
• using session charset: UTF-8
• checking for file ‘regmedint/DESCRIPTION’ ... OK
• this is package ‘regmedint’ version ‘1.0.1’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... NOTE Package suggested but not available for checking: ‘tidyverse’
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘regmedint’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the package can be unloaded cleanly ... [1s/2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/2s] OK
• checking loading without being on the library search path ... [1s/2s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [12s/18s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [2s/2s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [4s/5s] ERROR   Running ‘testthat.R’ [3s/4s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > library(testthat)   > library(regmedint)   >   > test_check("regmedint")   [ FAIL 19 | WARN 0 | SKIP 0 | PASS 23 ]      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Error ('test-01_regmedint_class_ui.R:10:1'): (code run outside of `test_that()`) ──   <packageNotFoundError/error/condition>   Error in `library(tidyverse)`: there is no package called 'tidyverse'   Backtrace:       ▆    1. └─base::library(tidyverse) at test-01_regmedint_class_ui.R:10:1   ── Error ('test-03_fit_mreg.R:11:1'): (code run outside of `test_that()`) ──────   <packageNotFoundError/error/condition>   Error in `library(tidyverse)`: there is no package called 'tidyverse'   Backtrace:       ▆    1. └─base::library(tidyverse) at test-03_fit_mreg.R:11:1   ── Error ('test-04_fit_yreg_linear.R:11:1'): (code run outside of `test_that()`) ──   <packageNotFoundError/error/condition>   Error in `library(tidyverse)`: there is no package called 'tidyverse'   Backtrace:       ▆    1. └─base::library(tidyverse) at test-04_fit_yreg_linear.R:11:1   ── Error ('test-04_fit_yreg_logistic.R:11:1'): (code run outside of `test_that()`) ──   <packageNotFoundError/error/condition>   Error in `library(tidyverse)`: there is no package called 'tidyverse'   Backtrace:       ▆    1. └─base::library(tidyverse) at test-04_fit_yreg_logistic.R:11:1   ── Error ('test-04_fit_yreg_loglinear.R:13:1'): (code run outside of `test_that()`) ──   <packageNotFoundError/error/condition>   Error in `library(tidyverse)`: there is no package called 'tidyverse'   Backtrace:       ▆    1. └─base::library(tidyverse) at test-04_fit_yreg_loglinear.R:13:1   ── Error ('test-04_fit_yreg_negbin.R:11:1'): (code run outside of `test_that()`) ──   <packageNotFoundError/error/condition>   Error in `library(tidyverse)`: there is no package called 'tidyverse'   Backtrace:       ▆    1. └─base::library(tidyverse) at test-04_fit_yreg_negbin.R:11:1   ── Error ('test-04_fit_yreg_poisson.R:11:1'): (code run outside of `test_that()`) ──   <packageNotFoundError/error/condition>   Error in `library(tidyverse)`: there is no package called 'tidyverse'   Backtrace:       ▆    1. └─base::library(tidyverse) at test-04_fit_yreg_poisson.R:11:1   ── Error ('test-04_fit_yreg_survAFT_exp.R:11:1'): (code run outside of `test_that()`) ──   <packageNotFoundError/error/condition>   Error in `library(tidyverse)`: there is no package called 'tidyverse'   Backtrace:       ▆    1. └─base::library(tidyverse) at test-04_fit_yreg_survAFT_exp.R:11:1   ── Error ('test-04_fit_yreg_survAFT_weibull.R:11:1'): (code run outside of `test_that()`) ──   <packageNotFoundError/error/condition>   Error in `library(tidyverse)`: there is no package called 'tidyverse'   Backtrace:       ▆    1. └─base::library(tidyverse) at test-04_fit_yreg_survAFT_weibull.R:11:1   ── Error ('test-04_fit_yreg_survCox.R:11:1'): (code run outside of `test_that()`) ──   <packageNotFoundError/error/condition>   Error in `library(tidyverse)`: there is no package called 'tidyverse'   Backtrace:       ▆    1. └─base::library(tidyverse) at test-04_fit_yreg_survCox.R:11:1   ── Error ('test-05_calc_myreg.R:11:1'): (code run outside of `test_that()`) ────   <packageNotFoundError/error/condition>   Error in `library(tidyverse)`: there is no package called 'tidyverse'   Backtrace:       ▆    1. └─base::library(tidyverse) at test-05_calc_myreg.R:11:1   ── Error ('test-06_calc_myreg_helpers_coef.R:11:1'): (code run outside of `test_that()`) ──   <packageNotFoundError/error/condition>   Error in `library(tidyverse)`: there is no package called 'tidyverse'   Backtrace:       ▆    1. └─base::library(tidyverse) at test-06_calc_myreg_helpers_coef.R:11:1   ── Error ('test-06_calc_myreg_helpers_vcov.R:11:1'): (code run outside of `test_that()`) ──   <packageNotFoundError/error/condition>   Error in `library(tidyverse)`: there is no package called 'tidyverse'   Backtrace:       ▆    1. └─base::library(tidyverse) at test-06_calc_myreg_helpers_vcov.R:11:1   ── Error ('test-07_calc_myreg_mreg_linear_yreg_linear.R:11:1'): (code run outside of `test_that()`) ──   <packageNotFoundError/error/condition>   Error in `library(tidyverse)`: there is no package called 'tidyverse'   Backtrace:       ▆    1. └─base::library(tidyverse) at test-07_calc_myreg_mreg_linear_yreg_linear.R:11:1   ── Error ('test-07_calc_myreg_mreg_linear_yreg_logistic.R:11:1'): (code run outside of `test_that()`) ──   <packageNotFoundError/error/condition>   Error in `library(tidyverse)`: there is no package called 'tidyverse'   Backtrace:       ▆    1. └─base::library(tidyverse) at test-07_calc_myreg_mreg_linear_yreg_logistic.R:11:1   ── Error ('test-07_calc_myreg_mreg_logistic_yreg_linear.R:11:1'): (code run outside of `test_that()`) ──   <packageNotFoundError/error/condition>   Error in `library(tidyverse)`: there is no package called 'tidyverse'   Backtrace:       ▆    1. └─base::library(tidyverse) at test-07_calc_myreg_mreg_logistic_yreg_linear.R:11:1   ── Error ('test-07_calc_myreg_mreg_logistic_yreg_logistic.R:11:1'): (code run outside of `test_that()`) ──   <packageNotFoundError/error/condition>   Error in `library(tidyverse)`: there is no package called 'tidyverse'   Backtrace:       ▆    1. └─base::library(tidyverse) at test-07_calc_myreg_mreg_logistic_yreg_logistic.R:11:1   ── Error ('test-08_regmedint_class_user_methods.R:16:5'): (code run outside of `test_that()`) ──   Error in `mutate(., male = if_else(sex == "m", 1L, 0L), status = if_else(status ==       0, 0L, 1L), bili_bin = if_else(bili > median(bili), 1L, 0L),       alk_phos = alk.phos)`: could not find function "mutate"   Backtrace:       ▆    1. └─testthat::describe(...) at test-08_regmedint_class_user_methods.R:12:1    2. └─base::eval(substitute(code), describe_environment)    3. └─base::eval(substitute(code), describe_environment)    4. └─pbc[complete.cases(pbc), ] %>% ... at test-08_regmedint_class_user_methods.R:16:5   ── Error ('test-09_cross_check_with_sas_macro.R:10:1'): (code run outside of `test_that()`) ──   <packageNotFoundError/error/condition>   Error in `library(tidyverse)`: there is no package called 'tidyverse'   Backtrace:       ▆    1. └─base::library(tidyverse) at test-09_cross_check_with_sas_macro.R:10:1      [ FAIL 19 | WARN 0 | SKIP 0 | PASS 23 ]   Error: Test failures   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [31s/41s] OK
• checking PDF version of manual ... [6s/8s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 ERROR, 1 NOTE