- using R Under development (unstable) (2025-07-13 r88407)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-14 (Debian 14.2.0-19) 14.2.0
GNU Fortran (Debian 14.2.0-19) 14.2.0
- running under: Debian GNU/Linux 13 (trixie)
- using session charset: UTF-8
- checking for file ‘rdracor/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘rdracor’ version ‘1.0.4’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [1s/2s] OK
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘rdracor’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [1s/1s] OK
- checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the package can be unloaded cleanly ... [1s/1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
- checking loading without being on the library search path ... [1s/1s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [6s/8s] OK
- checking Rd files ... [1s/2s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ... [2s/14s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [22s/107s] ERROR
Running ‘testthat.R’ [22s/106s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(rdracor)
>
> test_check("rdracor")
DraCor API URL: https://dracor.org/api/v1
openapi: https://dracor.org/api/v1/openapi.yaml
existdb: 6.4.0
version: 1.1.0
name: DraCor API v1
base: https://dracor.org/api/v1
status: stable[ FAIL 5 | WARN 0 | SKIP 0 | PASS 36 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-net.R:23:3'): cooccur_igraph is returned by get_net_cooccur_igraph() ──
Error in `igraph::graph_from_data_frame(edges, directed = FALSE, vertices = nodes)`: Some vertex names in edge list are not listed in vertex data frame
Backtrace:
▆
1. ├─testthat::expect_s3_class(...) at test-net.R:23:3
2. │ └─testthat::quasi_label(enquo(object), arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─rdracor::get_net_cooccur_igraph("gogol-zhenitba", "rus")
5. └─igraph::graph_from_data_frame(edges, directed = FALSE, vertices = nodes)
── Error ('test-net.R:30:3'): label_cooccur_igraph() return come NA for big network ──
Error in `igraph::graph_from_data_frame(edges, directed = FALSE, vertices = nodes)`: Duplicate vertex names
Backtrace:
▆
1. └─rdracor::get_net_cooccur_igraph("henry-iv-part-1", "shake") at test-net.R:30:3
2. └─igraph::graph_from_data_frame(edges, directed = FALSE, vertices = nodes)
── Error ('test-net.R:37:5'): label_cooccur_igraph() do not return NA after max_graph_size adjustment ──
Error in `igraph::graph_from_data_frame(edges, directed = FALSE, vertices = nodes)`: Duplicate vertex names
Backtrace:
▆
1. └─rdracor::get_net_cooccur_igraph("henry-iv-part-1", "shake") at test-net.R:37:5
2. └─igraph::graph_from_data_frame(edges, directed = FALSE, vertices = nodes)
── Error ('test-net.R:43:3'): summary.cooccur_igraph() prints appropriate number of rows ──
Error in `igraph::graph_from_data_frame(edges, directed = FALSE, vertices = nodes)`: Duplicate vertex names
Backtrace:
▆
1. └─rdracor::get_net_cooccur_igraph("henry-iv-part-1", "shake") at test-net.R:43:3
2. └─igraph::graph_from_data_frame(edges, directed = FALSE, vertices = nodes)
── Error ('test-net.R:48:3'): relations_igraph is returned by get_net_relations_igraph() ──
Error in `igraph::graph_from_data_frame(relations[, c("source", "target",
"type", "relation")], directed = TRUE, vertices = nodes)`: Some vertex names in edge list are not listed in vertex data frame
Backtrace:
▆
1. ├─testthat::expect_s3_class(...) at test-net.R:48:3
2. │ └─testthat::quasi_label(enquo(object), arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─rdracor::get_net_relations_igraph("gogol-zhenitba", "rus")
5. └─igraph::graph_from_data_frame(...)
[ FAIL 5 | WARN 0 | SKIP 0 | PASS 36 ]
Error: Test failures
Execution halted
- checking PDF version of manual ... [4s/6s] OK
- checking HTML version of manual ... [1s/1s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR