- using R Under development (unstable) (2026-05-09 r90030)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-15 (Debian 15.2.0-17) 15.2.0
GNU Fortran (Debian 15.2.0-17) 15.2.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
* current time: 2026-05-10 16:39:31 UTC
- checking for file ‘quollr/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘quollr’ version ‘1.0.6’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [2s/3s] OK
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘quollr’ can be installed ... OK
See the install log for details.
- used C++ compiler: ‘g++-15 (Debian 15.2.0-17) 15.2.0’
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [2s/2s] OK
- checking whether the package can be loaded with stated dependencies ... [1s/2s] OK
- checking whether the package can be unloaded cleanly ... [1s/2s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/2s] OK
- checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
- checking loading without being on the library search path ... [2s/2s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [11s/14s] OK
- checking Rd files ... [0s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [3s/4s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [8s/11s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [12s/15s] OK
Running ‘testthat.R’ [12s/14s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [32s/44s] ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘quollr1quickstart.Rmd’ using rmarkdown
--- finished re-building ‘quollr1quickstart.Rmd’
--- re-building ‘quollr2dataprocessing.Rmd’ using rmarkdown
--- finished re-building ‘quollr2dataprocessing.Rmd’
--- re-building ‘quollr3hexbin.Rmd’ using rmarkdown
--- finished re-building ‘quollr3hexbin.Rmd’
--- re-building ‘quollr4algo.Rmd’ using rmarkdown
--- finished re-building ‘quollr4algo.Rmd’
--- re-building ‘quollr5summary.Rmd’ using rmarkdown
--- finished re-building ‘quollr5summary.Rmd’
--- re-building ‘quollr6bestbinwidth.Rmd’ using rmarkdown
--- finished re-building ‘quollr6bestbinwidth.Rmd’
--- re-building ‘quollr7bestfit.Rmd’ using rmarkdown
--- finished re-building ‘quollr7bestfit.Rmd’
--- re-building ‘quollr8linkeddetourr.Rmd’ using rmarkdown
Quitting from quollr8linkeddetourr.Rmd:110-120 [unnamed-chunk-7]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `.subset()`:
! incorrect number of dimensions
---
Backtrace:
▆
1. ├─detourr::show_scatter(...)
2. │ └─detourr:::show_scatter_internal(...)
3. │ └─detourr::is_detour(x)
4. └─detourr::tour_path(...)
5. ├─detourr:::quiet(tourr::interpolate(bases, aps/fps))
6. │ └─base::force(x)
7. └─tourr::interpolate(bases, aps/fps)
8. ├─tourr::new_tour(basis_set[, , 1], planned_tour(basis_set, cycle))
9. │ └─base::stopifnot(inherits(tour_path, "tour_path"))
10. └─tourr::planned_tour(basis_set, cycle)
11. ├─base::as.list(basis_set)
12. └─tourr:::as.list.history_array(basis_set)
13. ├─base::do.call("c", apply(x, 3, list))
14. └─base::apply(x, 3, list)
15. ├─base::array(newX[, i], d.call, dn.call)
16. ├─newX[, i]
17. └─tourr:::`[.history_array`(newX, , i)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'quollr8linkeddetourr.Rmd' failed with diagnostics:
incorrect number of dimensions
--- failed re-building ‘quollr8linkeddetourr.Rmd’
SUMMARY: processing the following file failed:
‘quollr8linkeddetourr.Rmd’
Error: Vignette re-building failed.
Execution halted
- checking PDF version of manual ... [4s/5s] OK
- checking HTML version of manual ... [2s/3s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR