- using R Under development (unstable) (2025-07-15 r88411)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-14 (Debian 14.2.0-19) 14.2.0
GNU Fortran (Debian 14.2.0-19) 14.2.0
- running under: Debian GNU/Linux 13 (trixie)
- using session charset: UTF-8
- checking for file ‘qtlnet/DESCRIPTION’ ... OK
- this is package ‘qtlnet’ version ‘1.5.4’
- checking CRAN incoming feasibility ... [0s/1s] NOTE
Maintainer: ‘Brian S. Yandell <brian.yandell@wisc.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("Elias", "Chaibub"),
family = "Neto",
role = "aut",
email = "echaibub@hotmail.com"),
person(given = c("Brian", "S."),
family = "yandell",
role = c("aut", "cre"),
email = "brian.yandell@wisc.edu"))
as necessary.
Found the following URLs which should use \doi (with the DOI name only):
File ‘Pscdbp.Rd’:
http://dx.doi.org/10.1371/journal.pgen.0020130
http://dx.doi.org/10.1214/09-AOAS288
File ‘bic.Rd’:
http://dx.doi.org/10.1214/09-AOAS288
File ‘mcmc.Rd’:
http://dx.doi.org/10.1214/09-AOAS288
http://dx.doi.org/10.1007/s10994-008-5057-7
File ‘parents.Rd’:
http://dx.doi.org/10.1214/09-AOAS288
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘qtlnet’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [3s/5s] OK
- checking whether the package can be loaded with stated dependencies ... [3s/5s] OK
- checking whether the package can be unloaded cleanly ... [3s/5s] OK
- checking whether the namespace can be loaded with stated dependencies ... [3s/4s] OK
- checking whether the namespace can be unloaded cleanly ... [3s/4s] OK
- checking loading without being on the library search path ... [3s/4s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [21s/28s] OK
- checking Rd files ... [0s/0s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [1s/2s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [13s/15s] OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
glxnet 3.951 0.352 5.292
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [6s/8s] OK
- checking PDF version of manual ... [4s/6s] OK
- checking HTML version of manual ... [1s/2s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 NOTE