• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 16:56:06 UTC
• checking for file ‘pmclust/DESCRIPTION’ ... OK
• this is package ‘pmclust’ version ‘0.2-1’
• checking CRAN incoming feasibility ... [1s/2s] NOTE Maintainer: ‘Wei-Chen Chen <wccsnow@gmail.com>’ Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead. Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead.
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘pmclust’ can be installed ... OK See the install log for details.
• used C compiler: ‘gcc-16 (Debian 16.1.0-3) 16.1.0’
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the package can be unloaded cleanly ... [1s/2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/2s] OK
• checking loading without being on the library search path ... [1s/2s] OK
• checking whether startup messages can be suppressed ... [1s/2s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [11s/14s] OK
• checking Rd files ... [0s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in shell scripts ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [2s/2s] OK
• checking for unstated dependencies in ‘demo’ ... OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [5s/8s] OK
• checking PDF version of manual ... [6s/8s] OK
• checking HTML version of manual ... [1s/2s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0AY3GR’ ‘~/tmp/scratch/Rtmp0LpWrF’   ‘~/tmp/scratch/Rtmp36wepi’ ‘~/tmp/scratch/Rtmp3LAhaZ’   ‘~/tmp/scratch/Rtmp3TFM2U’ ‘~/tmp/scratch/Rtmp3cG7pY’   ‘~/tmp/scratch/Rtmp5Fph65’ ‘~/tmp/scratch/Rtmp5MOf3o’   ‘~/tmp/scratch/Rtmp5RgVFh’ ‘~/tmp/scratch/Rtmp6JeH9F’   ‘~/tmp/scratch/Rtmp6Kc83l’ ‘~/tmp/scratch/Rtmp6RA9v6’   ‘~/tmp/scratch/Rtmp7c4hXV’ ‘~/tmp/scratch/Rtmp8BKFhB’   ‘~/tmp/scratch/Rtmp9Gi43l’ ‘~/tmp/scratch/RtmpAA4IlH’   ‘~/tmp/scratch/RtmpAI3tj2’ ‘~/tmp/scratch/RtmpAJlvp4’   ‘~/tmp/scratch/RtmpATWtXv’ ‘~/tmp/scratch/RtmpAYgUWH’   ‘~/tmp/scratch/RtmpBD3xru’ ‘~/tmp/scratch/RtmpBWW9jP’   ‘~/tmp/scratch/RtmpBiWDEv’ ‘~/tmp/scratch/RtmpBz1wxf’   ‘~/tmp/scratch/RtmpCBzRD5’ ‘~/tmp/scratch/RtmpENxubV’   ‘~/tmp/scratch/RtmpEQHLJH’ ‘~/tmp/scratch/RtmpEX86Nw’   ‘~/tmp/scratch/RtmpErFyQ5’ ‘~/tmp/scratch/RtmpGJ8ZBy’   ‘~/tmp/scratch/RtmpGWUvcP’ ‘~/tmp/scratch/RtmpGsHySU’   ‘~/tmp/scratch/RtmpHOoguR’ ‘~/tmp/scratch/RtmpI4t9WN’   ‘~/tmp/scratch/RtmpI59feF’ ‘~/tmp/scratch/RtmpICWE8U’   ‘~/tmp/scratch/RtmpIO0Uo6’ ‘~/tmp/scratch/RtmpISubOf’   ‘~/tmp/scratch/RtmpIWfbTV’ ‘~/tmp/scratch/RtmpIZfEta’   ‘~/tmp/scratch/RtmpJP7CfC’ ‘~/tmp/scratch/RtmpJfcRIC’   ‘~/tmp/scratch/RtmpJuGLGZ’ ‘~/tmp/scratch/RtmpKsccvr’   ‘~/tmp/scratch/RtmpLAZslh’ ‘~/tmp/scratch/RtmpLDQ6bo’   ‘~/tmp/scratch/RtmpM3b2R7’ ‘~/tmp/scratch/RtmpMUjuxF’   ‘~/tmp/scratch/RtmpMasfk3’ ‘~/tmp/scratch/RtmpMgrXcZ’   ‘~/tmp/scratch/RtmpMrqWgf’ ‘~/tmp/scratch/RtmpMxGFws’   ‘~/tmp/scratch/RtmpN3SbYs’ ‘~/tmp/scratch/RtmpOIwtks’   ‘~/tmp/scratch/RtmpOViOCd’ ‘~/tmp/scratch/RtmpOX1Aqe’   ‘~/tmp/scratch/RtmpOhSU3t’ ‘~/tmp/scratch/RtmpP3EmCe’   ‘~/tmp/scratch/RtmpPmeBQu’ ‘~/tmp/scratch/RtmpQTabjZ’   ‘~/tmp/scratch/RtmpQWLJn1’ ‘~/tmp/scratch/RtmpQmTU6B’   ‘~/tmp/scratch/RtmpQuPA6j’ ‘~/tmp/scratch/RtmpRy8Vn0’   ‘~/tmp/scratch/RtmpSdvZU9’ ‘~/tmp/scratch/RtmpSquEhr’   ‘~/tmp/scratch/RtmpT4Ktki’ ‘~/tmp/scratch/RtmpTLheOn’   ‘~/tmp/scratch/RtmpTPhs4p’ ‘~/tmp/scratch/RtmpTSVd8I’   ‘~/tmp/scratch/RtmpTkmHCO’ ‘~/tmp/scratch/RtmpTxsXck’   ‘~/tmp/scratch/RtmpU7cJMi’ ‘~/tmp/scratch/RtmpUE613H’   ‘~/tmp/scratch/RtmpUeojZa’ ‘~/tmp/scratch/RtmpUlmDts’   ‘~/tmp/scratch/RtmpUs08Zo’ ‘~/tmp/scratch/RtmpUuCV2u’   ‘~/tmp/scratch/RtmpVgSBzm’ ‘~/tmp/scratch/RtmpWKBwdG’   ‘~/tmp/scratch/RtmpWZ8WuZ’ ‘~/tmp/scratch/RtmpWivftU’   ‘~/tmp/scratch/RtmpXKXThz’ ‘~/tmp/scratch/RtmpXNYFxS’   ‘~/tmp/scratch/RtmpXTrKaL’ ‘~/tmp/scratch/RtmpXbMHJ3’   ‘~/tmp/scratch/RtmpYGMXLB’ ‘~/tmp/scratch/RtmpZ606KE’   ‘~/tmp/scratch/RtmpZBO76O’ ‘~/tmp/scratch/RtmpaIY5Mf’   ‘~/tmp/scratch/RtmpaUWUT3’ ‘~/tmp/scratch/RtmpbBsGwQ’   ‘~/tmp/scratch/RtmpbQJEPJ’ ‘~/tmp/scratch/RtmpbrtYiZ’   ‘~/tmp/scratch/RtmpcRSeIV’ ‘~/tmp/scratch/RtmpcpcjXr’   ‘~/tmp/scratch/Rtmpd00P5o’ ‘~/tmp/scratch/RtmpdDGj9L’   ‘~/tmp/scratch/RtmpdPwa1V’ ‘~/tmp/scratch/RtmpdcFbN0’   ‘~/tmp/scratch/Rtmpdgn6nP’ ‘~/tmp/scratch/RtmpesBVTZ’   ‘~/tmp/scratch/Rtmpf23sWr’ ‘~/tmp/scratch/RtmpgJDd8C’   ‘~/tmp/scratch/RtmpgkZ5wJ’ ‘~/tmp/scratch/RtmpgveCrL’   ‘~/tmp/scratch/RtmphDu6PQ’ ‘~/tmp/scratch/RtmphnR8qL’   ‘~/tmp/scratch/RtmphtmDQS’ ‘~/tmp/scratch/RtmpjYoMhI’   ‘~/tmp/scratch/RtmpjeBCg0’ ‘~/tmp/scratch/RtmpkJ89HG’   ‘~/tmp/scratch/RtmpmCiBOz’ ‘~/tmp/scratch/RtmpmEJ50G’   ‘~/tmp/scratch/Rtmpn2WdTK’ ‘~/tmp/scratch/RtmpnpNPSh’   ‘~/tmp/scratch/RtmpnukygZ’ ‘~/tmp/scratch/RtmpoNuM8n’   ‘~/tmp/scratch/RtmpoPj2m1’ ‘~/tmp/scratch/Rtmpogyxxf’   ‘~/tmp/scratch/Rtmpp14I95’ ‘~/tmp/scratch/Rtmpq9yDjP’   ‘~/tmp/scratch/RtmpreuGVi’ ‘~/tmp/scratch/Rtmps5Um4o’   ‘~/tmp/scratch/RtmpsUSkyq’ ‘~/tmp/scratch/RtmpuNoxNd’   ‘~/tmp/scratch/Rtmpurp9Zr’ ‘~/tmp/scratch/Rtmpuy7CDk’   ‘~/tmp/scratch/RtmpvcaIS0’ ‘~/tmp/scratch/RtmpvdE7li’   ‘~/tmp/scratch/RtmpwfgsFw’ ‘~/tmp/scratch/Rtmpx8kPtn’   ‘~/tmp/scratch/Rtmpxbh5Gi’ ‘~/tmp/scratch/RtmpxlTYo2’   ‘~/tmp/scratch/RtmpyS8oPv’ ‘~/tmp/scratch/RtmpzBugyD’   ‘~/tmp/scratch/RtmpzDkXOY’ ‘~/tmp/scratch/RtmpzrTl1a’   ‘~/tmp/scratch/Rtmpzw0IlM’ ‘~/tmp/scratch/RtmpzxbGx0’   ‘~/tmp/scratch/quarto-session215ad166fc42b167’   ‘~/tmp/scratch/quarto-session4c63c198a19c2e3e’   ‘~/tmp/scratch/xvfb-run.3Oz650’ ‘~/tmp/scratch/xvfb-run.4OfVUa’   ‘~/tmp/scratch/xvfb-run.5IqzwE’ ‘~/tmp/scratch/xvfb-run.6OizPU’   ‘~/tmp/scratch/xvfb-run.76Ra7L’ ‘~/tmp/scratch/xvfb-run.7AEeJr’   ‘~/tmp/scratch/xvfb-run.9GS9ST’ ‘~/tmp/scratch/xvfb-run.9VQuW8’   ‘~/tmp/scratch/xvfb-run.9ibmzk’ ‘~/tmp/scratch/xvfb-run.AQ4l4d’   ‘~/tmp/scratch/xvfb-run.AxaNYs’ ‘~/tmp/scratch/xvfb-run.CAWSRb’   ‘~/tmp/scratch/xvfb-run.EBVwSa’ ‘~/tmp/scratch/xvfb-run.FS73Q4’   ‘~/tmp/scratch/xvfb-run.FSkt6Y’ ‘~/tmp/scratch/xvfb-run.GjTmjh’   ‘~/tmp/scratch/xvfb-run.J8tgXM’ ‘~/tmp/scratch/xvfb-run.L2DJzh’   ‘~/tmp/scratch/xvfb-run.MLYyHk’ ‘~/tmp/scratch/xvfb-run.Pi8CnB’   ‘~/tmp/scratch/xvfb-run.Syt0E5’ ‘~/tmp/scratch/xvfb-run.XmHtQj’   ‘~/tmp/scratch/xvfb-run.Z8urDM’ ‘~/tmp/scratch/xvfb-run.ZxeFDV’   ‘~/tmp/scratch/xvfb-run.aZzPg4’ ‘~/tmp/scratch/xvfb-run.adch5B’   ‘~/tmp/scratch/xvfb-run.b8jh4l’ ‘~/tmp/scratch/xvfb-run.byZfLW’   ‘~/tmp/scratch/xvfb-run.f1HbLt’ ‘~/tmp/scratch/xvfb-run.f9T34i’   ‘~/tmp/scratch/xvfb-run.fUbL5r’ ‘~/tmp/scratch/xvfb-run.gOXd4r’   ‘~/tmp/scratch/xvfb-run.gyBFMK’ ‘~/tmp/scratch/xvfb-run.haHkny’   ‘~/tmp/scratch/xvfb-run.i1r3th’ ‘~/tmp/scratch/xvfb-run.iNj8a9’   ‘~/tmp/scratch/xvfb-run.ivthcL’ ‘~/tmp/scratch/xvfb-run.m1Obum’   ‘~/tmp/scratch/xvfb-run.mEYHTa’ ‘~/tmp/scratch/xvfb-run.nCXrTv’   ‘~/tmp/scratch/xvfb-run.nLPfvD’ ‘~/tmp/scratch/xvfb-run.o499Sk’   ‘~/tmp/scratch/xvfb-run.o6zgFM’ ‘~/tmp/scratch/xvfb-run.r9fXNz’   ‘~/tmp/scratch/xvfb-run.rJHgrN’ ‘~/tmp/scratch/xvfb-run.rN2eTz’   ‘~/tmp/scratch/xvfb-run.rhvFEi’ ‘~/tmp/scratch/xvfb-run.tYs5p9’   ‘~/tmp/scratch/xvfb-run.tZ9LeW’ ‘~/tmp/scratch/xvfb-run.vmN7zB’   ‘~/tmp/scratch/xvfb-run.wGggtr’ ‘~/tmp/scratch/xvfb-run.wbEByO’   ‘~/tmp/scratch/xvfb-run.yTQVnj’   ‘/dev/shm/sm_segment.gimli1.1001.15840000.0’   ‘/dev/shm/sm_segment.gimli1.1001.25130000.0’   ‘/dev/shm/sm_segment.gimli1.1001.36b60000.0’   ‘/dev/shm/sm_segment.gimli1.1001.3a030000.0’   ‘/dev/shm/sm_segment.gimli1.1001.3d8e0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.4b0e0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.4e660000.0’   ‘/dev/shm/sm_segment.gimli1.1001.528a0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.731a0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.79280000.0’   ‘/dev/shm/sm_segment.gimli1.1001.7a010000.0’   ‘/dev/shm/sm_segment.gimli1.1001.7b6c0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.7bd60000.0’   ‘/dev/shm/sm_segment.gimli1.1001.7bf0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.7c160000.0’   ‘/dev/shm/sm_segment.gimli1.1001.854c0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.86910000.0’   ‘/dev/shm/sm_segment.gimli1.1001.a0ab0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.b4c60000.0’   ‘/dev/shm/sm_segment.gimli1.1001.c3690000.0’   ‘/dev/shm/sm_segment.gimli1.1001.d0c20000.0’   ‘/dev/shm/sm_segment.gimli1.1001.ed000000.0’   ‘/dev/shm/sm_segment.gimli1.1001.fc460000.0’   ‘~/.cache/pocl/uncached/tempfile_3D9q6C’   ‘~/.cache/pocl/uncached/tempfile_3E9Ghg’   ‘~/.cache/pocl/uncached/tempfile_61CdJp’   ‘~/.cache/pocl/uncached/tempfile_AmuBuR’   ‘~/.cache/pocl/uncached/tempfile_FXKm0L’   ‘~/.cache/pocl/uncached/tempfile_I1nBQI’   ‘~/.cache/pocl/uncached/tempfile_OmavZQ’   ‘~/.cache/pocl/uncached/tempfile_Qn0D1N’   ‘~/.cache/pocl/uncached/tempfile_SZtkDd’   ‘~/.cache/pocl/uncached/tempfile_UIKDx0’   ‘~/.cache/pocl/uncached/tempfile_WT23zf’   ‘~/.cache/pocl/uncached/tempfile_Zg9WMU’   ‘~/.cache/pocl/uncached/tempfile_bYQJyD’   ‘~/.cache/pocl/uncached/tempfile_ewxati’   ‘~/.cache/pocl/uncached/tempfile_jDToQ1’   ‘~/.cache/pocl/uncached/tempfile_jEtz3N’   ‘~/.cache/pocl/uncached/tempfile_l5WYB5’   ‘~/.cache/pocl/uncached/tempfile_mIsuHk’   ‘~/.cache/pocl/uncached/tempfile_nblEF6’   ‘~/.cache/pocl/uncached/tempfile_pJJyll’   ‘~/.cache/pocl/uncached/tempfile_pS9ULH’   ‘~/.cache/pocl/uncached/tempfile_xrgni0’   ‘~/.cache/pocl/uncached/tempfile_zpBAEy’   ‘~/.cache/quarto/sass/sass.kv-shm’ ‘~/.cache/quarto/sass/sass.kv-wal’
• DONE

Status: 2 NOTEs