• using R Under development (unstable) (2026-08-02 r90338)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-03 17:07:16 UTC
• checking for file ‘plsgenomics/DESCRIPTION’ ... OK
• this is package ‘plsgenomics’ version ‘1.5-3’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/2s] NOTE Maintainer: ‘Ghislain Durif <gd.dev@libertymail.net>’ No Authors@R field in DESCRIPTION. Please add one, modifying   Authors@R: c(person(given = "Anne-Laure",                       family = "Boulesteix",                       role = "aut",                       email = "boulesteix@ibe.med.uni-muenchen.de"),                person(given = "Ghislain",                       family = "Durif",                       role = c("aut", "cre"),                       email = "gd.dev@libertymail.net"),                person(given = "Sophie",                       family = "Lambert-Lacroix",                       role = "aut",                       email = "sophie.lambert-lacroix@univ-grenoble-alpes.fr"),                person(given = "Julie",                       family = "Peyre",                       role = "aut",                       email = "Julie.Peyre@univ-grenoble-alpes.fr"),                person(given = "Korbinian",                       family = "Strimmer.",                       role = "aut",                       email = "k.strimmer@imperial.ac.uk")) as necessary.
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘plsgenomics’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/2s] OK
• checking loading without being on the library search path ... [1s/2s] OK
• checking whether startup messages can be suppressed ... [1s/2s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [20s/26s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/1s] OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [5s/6s] OK
• checking PDF version of manual ... [6s/8s] OK
• checking HTML version of manual ... [2s/3s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0mc1QE’ ‘~/tmp/scratch/Rtmp1I1OSi’   ‘~/tmp/scratch/Rtmp1dWWGc’ ‘~/tmp/scratch/Rtmp20V2x3’   ‘~/tmp/scratch/Rtmp2PSDre’ ‘~/tmp/scratch/Rtmp2dtQoi’   ‘~/tmp/scratch/Rtmp3GqV5e’ ‘~/tmp/scratch/Rtmp3bmrdJ’   ‘~/tmp/scratch/Rtmp3s7NVl’ ‘~/tmp/scratch/Rtmp43QYu4’   ‘~/tmp/scratch/Rtmp4VJxuv’ ‘~/tmp/scratch/Rtmp4VRzdO’   ‘~/tmp/scratch/Rtmp5JKIVi’ ‘~/tmp/scratch/Rtmp6EHusP’   ‘~/tmp/scratch/Rtmp7CBhS9’ ‘~/tmp/scratch/Rtmp7IOgPj’   ‘~/tmp/scratch/Rtmp84EPBq’ ‘~/tmp/scratch/Rtmp8SKAIB’   ‘~/tmp/scratch/Rtmp9IsIdF’ ‘~/tmp/scratch/Rtmp9TC2CO’   ‘~/tmp/scratch/Rtmp9qYeP4’ ‘~/tmp/scratch/RtmpAjE9YA’   ‘~/tmp/scratch/RtmpBcNCbK’ ‘~/tmp/scratch/RtmpBff3Sx’   ‘~/tmp/scratch/RtmpC1DXvp’ ‘~/tmp/scratch/RtmpC4sVaV’   ‘~/tmp/scratch/RtmpDExFeb’ ‘~/tmp/scratch/RtmpDalQqU’   ‘~/tmp/scratch/RtmpDu4W02’ ‘~/tmp/scratch/RtmpDzmcX9’   ‘~/tmp/scratch/RtmpE0mwif’ ‘~/tmp/scratch/RtmpEhpLli’   ‘~/tmp/scratch/RtmpF2YYPR’ ‘~/tmp/scratch/RtmpFALLSZ’   ‘~/tmp/scratch/RtmpFsh1Nm’ ‘~/tmp/scratch/RtmpGe8uAU’   ‘~/tmp/scratch/RtmpGo73DY’ ‘~/tmp/scratch/RtmpIaFOhZ’   ‘~/tmp/scratch/RtmpIx5noc’ ‘~/tmp/scratch/RtmpJ8uNt7’   ‘~/tmp/scratch/RtmpJgyN6f’ ‘~/tmp/scratch/RtmpJjP6rK’   ‘~/tmp/scratch/RtmpJph5hk’ ‘~/tmp/scratch/RtmpK1g4CM’   ‘~/tmp/scratch/RtmpK6opc3’ ‘~/tmp/scratch/RtmpKEssbk’   ‘~/tmp/scratch/RtmpL1cVgP’ ‘~/tmp/scratch/RtmpLuIEQ7’   ‘~/tmp/scratch/RtmpMJBWhz’ ‘~/tmp/scratch/RtmpMtGp31’   ‘~/tmp/scratch/RtmpN0C3LW’ ‘~/tmp/scratch/RtmpN2v0KM’   ‘~/tmp/scratch/RtmpNOmym7’ ‘~/tmp/scratch/RtmpNTiGgG’   ‘~/tmp/scratch/RtmpOIPQyH’ ‘~/tmp/scratch/RtmpOcKjpW’   ‘~/tmp/scratch/RtmpOs6gtu’ ‘~/tmp/scratch/RtmpPgICP0’   ‘~/tmp/scratch/RtmpQOuOjX’ ‘~/tmp/scratch/RtmpRedpCI’   ‘~/tmp/scratch/RtmpRh4HOJ’ ‘~/tmp/scratch/RtmpRnW6DD’   ‘~/tmp/scratch/RtmpRz7KuK’ ‘~/tmp/scratch/RtmpS3GrLO’   ‘~/tmp/scratch/RtmpSXq674’ ‘~/tmp/scratch/RtmpSfKFcd’   ‘~/tmp/scratch/RtmpShPGnA’ ‘~/tmp/scratch/RtmpTeR39I’   ‘~/tmp/scratch/RtmpV3ldcD’ ‘~/tmp/scratch/RtmpViz8CJ’   ‘~/tmp/scratch/RtmpWA9dTZ’ ‘~/tmp/scratch/RtmpWLwgyg’   ‘~/tmp/scratch/RtmpWS1u3W’ ‘~/tmp/scratch/RtmpXEzy03’   ‘~/tmp/scratch/RtmpXGgrgK’ ‘~/tmp/scratch/RtmpXN8nXA’   ‘~/tmp/scratch/RtmpXRgHib’ ‘~/tmp/scratch/RtmpXTzDdI’   ‘~/tmp/scratch/RtmpXizgdk’ ‘~/tmp/scratch/RtmpZEeVCn’   ‘~/tmp/scratch/RtmpZLPYxT’ ‘~/tmp/scratch/Rtmpa2UA6b’   ‘~/tmp/scratch/RtmpatZZZn’ ‘~/tmp/scratch/Rtmpc7YPpq’   ‘~/tmp/scratch/RtmpcvDpnM’ ‘~/tmp/scratch/Rtmpd5wGU5’   ‘~/tmp/scratch/Rtmpd60ikb’ ‘~/tmp/scratch/Rtmpe7yC55’   ‘~/tmp/scratch/RtmpeFGa1P’ ‘~/tmp/scratch/RtmpeTDTaK’   ‘~/tmp/scratch/RtmpevvUxz’ ‘~/tmp/scratch/RtmpfaEUaS’   ‘~/tmp/scratch/RtmpgZLzKG’ ‘~/tmp/scratch/RtmphAGW01’   ‘~/tmp/scratch/RtmphkaYB6’ ‘~/tmp/scratch/RtmpibzwIw’   ‘~/tmp/scratch/RtmpilyUxJ’ ‘~/tmp/scratch/RtmpjLWW70’   ‘~/tmp/scratch/RtmpjSRmeG’ ‘~/tmp/scratch/RtmpjVxQ9N’   ‘~/tmp/scratch/RtmpjYrGZQ’ ‘~/tmp/scratch/RtmpkXq397’   ‘~/tmp/scratch/RtmpliReOW’ ‘~/tmp/scratch/RtmplkgMlT’   ‘~/tmp/scratch/RtmpmY57JF’ ‘~/tmp/scratch/RtmpmimHhH’   ‘~/tmp/scratch/Rtmpn3JODX’ ‘~/tmp/scratch/Rtmpn8j5ix’   ‘~/tmp/scratch/RtmpnLRZvk’ ‘~/tmp/scratch/RtmpnOpqTX’   ‘~/tmp/scratch/RtmpnS9R18’ ‘~/tmp/scratch/Rtmpnh6IfP’   ‘~/tmp/scratch/RtmpoQAqhV’ ‘~/tmp/scratch/RtmpoTn569’   ‘~/tmp/scratch/Rtmpoj6Ivv’ ‘~/tmp/scratch/Rtmpp2fvaz’   ‘~/tmp/scratch/RtmppgdIfh’ ‘~/tmp/scratch/RtmppssMIs’   ‘~/tmp/scratch/Rtmpqngpb6’ ‘~/tmp/scratch/RtmpqvZ89M’   ‘~/tmp/scratch/RtmprG06hK’ ‘~/tmp/scratch/RtmprP7vqO’   ‘~/tmp/scratch/RtmprX6Vja’ ‘~/tmp/scratch/RtmprgSGht’   ‘~/tmp/scratch/RtmpsHPD2I’ ‘~/tmp/scratch/Rtmpty6p8U’   ‘~/tmp/scratch/RtmpuTrmFt’ ‘~/tmp/scratch/RtmpunTdvE’   ‘~/tmp/scratch/RtmpviCpJh’ ‘~/tmp/scratch/Rtmpvq8F0o’   ‘~/tmp/scratch/RtmpwEaxIg’ ‘~/tmp/scratch/RtmpxRWpcK’   ‘~/tmp/scratch/RtmpydpX7X’ ‘~/tmp/scratch/Rtmpz2yFy3’   ‘~/tmp/scratch/RtmpzI0eF3’ ‘~/tmp/scratch/xvfb-run.1Wchg3’   ‘~/tmp/scratch/xvfb-run.1bCCiP’ ‘~/tmp/scratch/xvfb-run.66WqkK’   ‘~/tmp/scratch/xvfb-run.6StswA’ ‘~/tmp/scratch/xvfb-run.6apBsJ’   ‘~/tmp/scratch/xvfb-run.6rNOzd’ ‘~/tmp/scratch/xvfb-run.9VWzED’   ‘~/tmp/scratch/xvfb-run.AaeQ6k’ ‘~/tmp/scratch/xvfb-run.B9Sy98’   ‘~/tmp/scratch/xvfb-run.D1tv8l’ ‘~/tmp/scratch/xvfb-run.Fi7rkx’   ‘~/tmp/scratch/xvfb-run.FiJMvz’ ‘~/tmp/scratch/xvfb-run.GQnTGk’   ‘~/tmp/scratch/xvfb-run.HcM7jM’ ‘~/tmp/scratch/xvfb-run.IriLGl’   ‘~/tmp/scratch/xvfb-run.J0ypCz’ ‘~/tmp/scratch/xvfb-run.MTLWuM’   ‘~/tmp/scratch/xvfb-run.Q2Bcju’ ‘~/tmp/scratch/xvfb-run.QS9cBx’   ‘~/tmp/scratch/xvfb-run.TDsXTV’ ‘~/tmp/scratch/xvfb-run.Tfdn40’   ‘~/tmp/scratch/xvfb-run.bLA3px’ ‘~/tmp/scratch/xvfb-run.dPnQyj’   ‘~/tmp/scratch/xvfb-run.dRHQDa’ ‘~/tmp/scratch/xvfb-run.dieH3w’   ‘~/tmp/scratch/xvfb-run.fMG7pw’ ‘~/tmp/scratch/xvfb-run.gHorAx’   ‘~/tmp/scratch/xvfb-run.gxEhaP’ ‘~/tmp/scratch/xvfb-run.hSBJkv’   ‘~/tmp/scratch/xvfb-run.huhX82’ ‘~/tmp/scratch/xvfb-run.i0StmV’   ‘~/tmp/scratch/xvfb-run.iRVOkv’ ‘~/tmp/scratch/xvfb-run.inPXVq’   ‘~/tmp/scratch/xvfb-run.jCJt9X’ ‘~/tmp/scratch/xvfb-run.kbnPGu’   ‘~/tmp/scratch/xvfb-run.kdPfKW’ ‘~/tmp/scratch/xvfb-run.lLFkJE’   ‘~/tmp/scratch/xvfb-run.lkYgXB’ ‘~/tmp/scratch/xvfb-run.m0GpER’   ‘~/tmp/scratch/xvfb-run.mfAcy8’ ‘~/tmp/scratch/xvfb-run.my9Atr’   ‘~/tmp/scratch/xvfb-run.nHGtdt’ ‘~/tmp/scratch/xvfb-run.nwCesH’   ‘~/tmp/scratch/xvfb-run.qLnP2n’ ‘~/tmp/scratch/xvfb-run.qc4Qmp’   ‘~/tmp/scratch/xvfb-run.sB8n0k’ ‘~/tmp/scratch/xvfb-run.uXQOpZ’   ‘~/tmp/scratch/xvfb-run.v4N0N7’ ‘~/tmp/scratch/xvfb-run.wGQI6g’   ‘~/tmp/scratch/xvfb-run.xDVRbQ’ ‘~/tmp/scratch/xvfb-run.xUfphh’   ‘~/tmp/scratch/xvfb-run.yW6T88’ ‘~/tmp/scratch/xvfb-run.ymCbf7’   ‘~/tmp/scratch/xvfb-run.znkpbu’   ‘/dev/shm/sm_segment.gimli1.1001.23c90000.0’   ‘/dev/shm/sm_segment.gimli1.1001.29730000.0’   ‘/dev/shm/sm_segment.gimli1.1001.2fc60000.0’   ‘/dev/shm/sm_segment.gimli1.1001.4dee0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.4eb30000.0’   ‘/dev/shm/sm_segment.gimli1.1001.5ffc0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.78620000.0’   ‘/dev/shm/sm_segment.gimli1.1001.7cf60000.0’   ‘/dev/shm/sm_segment.gimli1.1001.88f50000.0’   ‘/dev/shm/sm_segment.gimli1.1001.93b60000.0’   ‘/dev/shm/sm_segment.gimli1.1001.9b1b0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.9fd00000.0’   ‘/dev/shm/sm_segment.gimli1.1001.a7790000.0’   ‘/dev/shm/sm_segment.gimli1.1001.a9890000.0’   ‘/dev/shm/sm_segment.gimli1.1001.ad3a0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.be5b0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.dbd40000.0’   ‘/dev/shm/sm_segment.gimli1.1001.dff00000.0’   ‘/dev/shm/sm_segment.gimli1.1001.e2bb0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.f9c50000.0’   ‘/dev/shm/sm_segment.gimli1.1001.fa0b0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.fd6f0000.0’   ‘~/.cache/pocl/uncached/tempfile_3SA2ov’   ‘~/.cache/pocl/uncached/tempfile_6VweJ2’   ‘~/.cache/pocl/uncached/tempfile_AiOwse’   ‘~/.cache/pocl/uncached/tempfile_DalOKe’   ‘~/.cache/pocl/uncached/tempfile_GqUBIU’   ‘~/.cache/pocl/uncached/tempfile_KC4g3C’   ‘~/.cache/pocl/uncached/tempfile_Ldu9la’   ‘~/.cache/pocl/uncached/tempfile_WI3feU’   ‘~/.cache/pocl/uncached/tempfile_XGF3Ik’   ‘~/.cache/pocl/uncached/tempfile_YeXXsf’   ‘~/.cache/pocl/uncached/tempfile_ccazey’   ‘~/.cache/pocl/uncached/tempfile_d7D69L’   ‘~/.cache/pocl/uncached/tempfile_hUwz5D’   ‘~/.cache/pocl/uncached/tempfile_mYsxyz’   ‘~/.cache/pocl/uncached/tempfile_psdFyh’   ‘~/.cache/pocl/uncached/tempfile_roM7ym’   ‘~/.cache/pocl/uncached/tempfile_t4ZNnZ’   ‘~/.cache/pocl/uncached/tempfile_u5BQyF’   ‘~/.cache/pocl/uncached/tempfile_vIyLOu’   ‘~/.cache/pocl/uncached/tempfile_vzZnVf’   ‘~/.cache/pocl/uncached/tempfile_wFUyr2’   ‘~/.cache/pocl/uncached/tempfile_yBONbQ’   ‘~/.cache/pocl/uncached/tempfile_zXoYcQ’
• DONE

Status: 2 NOTEs