• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 16:49:15 UTC
• checking for file ‘penalizedclr/DESCRIPTION’ ... OK
• this is package ‘penalizedclr’ version ‘2.0.0’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/1s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘penalizedclr’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/2s] OK
• checking loading without being on the library search path ... [1s/2s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [8s/12s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [3s/4s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [10s/51s] OK
• checking PDF version of manual ... [4s/6s] OK
• checking HTML version of manual ... [0s/0s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0BJcKH’ ‘~/tmp/scratch/Rtmp0aObO0’   ‘~/tmp/scratch/Rtmp0pocbi’ ‘~/tmp/scratch/Rtmp1cfFEe’   ‘~/tmp/scratch/Rtmp1fZpXn’ ‘~/tmp/scratch/Rtmp2mDS1I’   ‘~/tmp/scratch/Rtmp32uMFz’ ‘~/tmp/scratch/Rtmp3Ibfgq’   ‘~/tmp/scratch/Rtmp3Ph5Gb’ ‘~/tmp/scratch/Rtmp3jJU9N’   ‘~/tmp/scratch/Rtmp3jTn37’ ‘~/tmp/scratch/Rtmp4pvsJu’   ‘~/tmp/scratch/Rtmp4wRvHP’ ‘~/tmp/scratch/Rtmp57fJ9F’   ‘~/tmp/scratch/Rtmp5KKlfS’ ‘~/tmp/scratch/Rtmp5U2EJM’   ‘~/tmp/scratch/Rtmp5eT1eL’ ‘~/tmp/scratch/Rtmp5mGMhi’   ‘~/tmp/scratch/Rtmp66pATc’ ‘~/tmp/scratch/Rtmp8DDa2N’   ‘~/tmp/scratch/Rtmp9mNpDq’ ‘~/tmp/scratch/Rtmp9oo3Ra’   ‘~/tmp/scratch/RtmpA21wnQ’ ‘~/tmp/scratch/RtmpAD4onV’   ‘~/tmp/scratch/RtmpAHlLLO’ ‘~/tmp/scratch/RtmpAM1lIs’   ‘~/tmp/scratch/RtmpANYF9L’ ‘~/tmp/scratch/RtmpAUegIe’   ‘~/tmp/scratch/RtmpAWLDwm’ ‘~/tmp/scratch/RtmpAa6ScA’   ‘~/tmp/scratch/RtmpAaQ2GH’ ‘~/tmp/scratch/RtmpAyOHRp’   ‘~/tmp/scratch/RtmpCHES3l’ ‘~/tmp/scratch/RtmpCWGze7’   ‘~/tmp/scratch/RtmpDsvH7J’ ‘~/tmp/scratch/RtmpE9LkQR’   ‘~/tmp/scratch/RtmpEoUmq6’ ‘~/tmp/scratch/RtmpF8vUpX’   ‘~/tmp/scratch/RtmpFJfm0u’ ‘~/tmp/scratch/RtmpFjvyrC’   ‘~/tmp/scratch/RtmpGPSrLv’ ‘~/tmp/scratch/RtmpGmUvDL’   ‘~/tmp/scratch/RtmpGqAiK0’ ‘~/tmp/scratch/RtmpGrE6Z5’   ‘~/tmp/scratch/RtmpHHFUdC’ ‘~/tmp/scratch/RtmpHJ79Ly’   ‘~/tmp/scratch/RtmpIywVP6’ ‘~/tmp/scratch/RtmpJ5Dcqk’   ‘~/tmp/scratch/RtmpJLMe4J’ ‘~/tmp/scratch/RtmpJjzgjv’   ‘~/tmp/scratch/RtmpKITJH9’ ‘~/tmp/scratch/RtmpKOzWIR’   ‘~/tmp/scratch/RtmpKaFViX’ ‘~/tmp/scratch/RtmpLcGKuX’   ‘~/tmp/scratch/RtmpLygutR’ ‘~/tmp/scratch/RtmpN92sDq’   ‘~/tmp/scratch/RtmpOKiKag’ ‘~/tmp/scratch/RtmpP9oxTR’   ‘~/tmp/scratch/RtmpPL7WEi’ ‘~/tmp/scratch/RtmpPqciT3’   ‘~/tmp/scratch/RtmpQC3VH6’ ‘~/tmp/scratch/RtmpQOrV6n’   ‘~/tmp/scratch/RtmpQvEplF’ ‘~/tmp/scratch/RtmpREgrek’   ‘~/tmp/scratch/RtmpRM1pYp’ ‘~/tmp/scratch/RtmpS9LUMY’   ‘~/tmp/scratch/RtmpSLaCrv’ ‘~/tmp/scratch/RtmpSxHn1G’   ‘~/tmp/scratch/RtmpT61HBI’ ‘~/tmp/scratch/RtmpT9QOay’   ‘~/tmp/scratch/RtmpTxvL1I’ ‘~/tmp/scratch/RtmpUwT7Jx’   ‘~/tmp/scratch/RtmpVYoRbJ’ ‘~/tmp/scratch/RtmpWqUAjF’   ‘~/tmp/scratch/RtmpXxfRoU’ ‘~/tmp/scratch/RtmpYaj3Fd’   ‘~/tmp/scratch/RtmpZ1y2qO’ ‘~/tmp/scratch/Rtmpa3hQAY’   ‘~/tmp/scratch/RtmpaBiqu4’ ‘~/tmp/scratch/RtmpaHsrFz’   ‘~/tmp/scratch/RtmpaNXWOY’ ‘~/tmp/scratch/RtmpaqCrGz’   ‘~/tmp/scratch/RtmpbMMXfp’ ‘~/tmp/scratch/RtmpbcCX56’   ‘~/tmp/scratch/RtmpbtHJS0’ ‘~/tmp/scratch/RtmpcBc8ab’   ‘~/tmp/scratch/RtmpcTDVsQ’ ‘~/tmp/scratch/RtmpckpSqO’   ‘~/tmp/scratch/RtmpdFRL33’ ‘~/tmp/scratch/RtmpeaXoL9’   ‘~/tmp/scratch/Rtmped84NF’ ‘~/tmp/scratch/RtmpellE7E’   ‘~/tmp/scratch/RtmpfBzQql’ ‘~/tmp/scratch/RtmpftLAcm’   ‘~/tmp/scratch/RtmpfwiUR6’ ‘~/tmp/scratch/Rtmpg5vU0B’   ‘~/tmp/scratch/RtmpgSaahh’ ‘~/tmp/scratch/RtmpgaJQFD’   ‘~/tmp/scratch/RtmpghUMC6’ ‘~/tmp/scratch/Rtmphw3fAK’   ‘~/tmp/scratch/RtmpiJAjV0’ ‘~/tmp/scratch/RtmpjGWG7H’   ‘~/tmp/scratch/RtmpjLk7em’ ‘~/tmp/scratch/RtmpjViHw8’   ‘~/tmp/scratch/RtmpjZOl1W’ ‘~/tmp/scratch/RtmpjjJrY2’   ‘~/tmp/scratch/RtmpkGWcXl’ ‘~/tmp/scratch/Rtmpki13ys’   ‘~/tmp/scratch/RtmpkviPO5’ ‘~/tmp/scratch/RtmplKV9KJ’   ‘~/tmp/scratch/RtmplYSibl’ ‘~/tmp/scratch/RtmpmH2o03’   ‘~/tmp/scratch/RtmpmTiviu’ ‘~/tmp/scratch/Rtmpmh1nZX’   ‘~/tmp/scratch/Rtmpn9meGU’ ‘~/tmp/scratch/RtmpngI31H’   ‘~/tmp/scratch/RtmpoDG3Gi’ ‘~/tmp/scratch/RtmppOw9sg’   ‘~/tmp/scratch/RtmppPHMv2’ ‘~/tmp/scratch/RtmppT35rn’   ‘~/tmp/scratch/Rtmpq9q7V3’ ‘~/tmp/scratch/RtmpqPxA5g’   ‘~/tmp/scratch/RtmprEmygX’ ‘~/tmp/scratch/RtmpsSfdgO’   ‘~/tmp/scratch/RtmptHSezo’ ‘~/tmp/scratch/RtmptLeMXK’   ‘~/tmp/scratch/RtmptYRd1Z’ ‘~/tmp/scratch/Rtmptba2wh’   ‘~/tmp/scratch/Rtmpts3vIx’ ‘~/tmp/scratch/RtmpuEFQ1K’   ‘~/tmp/scratch/RtmpuNoidg’ ‘~/tmp/scratch/RtmpulrZ91’   ‘~/tmp/scratch/RtmpumzEOy’ ‘~/tmp/scratch/RtmpunR9W9’   ‘~/tmp/scratch/RtmpvVhkgC’ ‘~/tmp/scratch/RtmpvoGn0X’   ‘~/tmp/scratch/RtmpwPDkZl’ ‘~/tmp/scratch/RtmpwbDjqc’   ‘~/tmp/scratch/Rtmpxb10BP’ ‘~/tmp/scratch/RtmpxbCxtW’   ‘~/tmp/scratch/RtmpxwEHlQ’ ‘~/tmp/scratch/RtmpyKOiwb’   ‘~/tmp/scratch/RtmpyMouT3’ ‘~/tmp/scratch/Rtmpye2ykk’   ‘~/tmp/scratch/RtmpyyrGp6’ ‘~/tmp/scratch/Rtmpz2ZtK6’   ‘~/tmp/scratch/Rtmpz9FL2f’ ‘~/tmp/scratch/RtmpzFBrpH’   ‘~/tmp/scratch/RtmpzhE7nS’ ‘~/tmp/scratch/RtmpzjL9wt’   ‘~/tmp/scratch/ccDT7dYh.s’ ‘~/tmp/scratch/xvfb-run.5DAyr4’   ‘~/tmp/scratch/xvfb-run.6QSGtN’ ‘~/tmp/scratch/xvfb-run.6X0cD8’   ‘~/tmp/scratch/xvfb-run.6e9B4V’ ‘~/tmp/scratch/xvfb-run.6vHqkc’   ‘~/tmp/scratch/xvfb-run.8SbxYU’ ‘~/tmp/scratch/xvfb-run.94PZqX’   ‘~/tmp/scratch/xvfb-run.9D4FcE’ ‘~/tmp/scratch/xvfb-run.9GvZPY’   ‘~/tmp/scratch/xvfb-run.9WWGyI’ ‘~/tmp/scratch/xvfb-run.A8yzBH’   ‘~/tmp/scratch/xvfb-run.BUaf56’ ‘~/tmp/scratch/xvfb-run.C7flPf’   ‘~/tmp/scratch/xvfb-run.CrlYl2’ ‘~/tmp/scratch/xvfb-run.Dy06kJ’   ‘~/tmp/scratch/xvfb-run.EbrTDZ’ ‘~/tmp/scratch/xvfb-run.EnJOz0’   ‘~/tmp/scratch/xvfb-run.FEETg2’ ‘~/tmp/scratch/xvfb-run.FNus4l’   ‘~/tmp/scratch/xvfb-run.FTcjWB’ ‘~/tmp/scratch/xvfb-run.Fb7pm6’   ‘~/tmp/scratch/xvfb-run.G38SPs’ ‘~/tmp/scratch/xvfb-run.HDHf7a’   ‘~/tmp/scratch/xvfb-run.JXNXX7’ ‘~/tmp/scratch/xvfb-run.KEa067’   ‘~/tmp/scratch/xvfb-run.Kb4UQE’ ‘~/tmp/scratch/xvfb-run.Kmq3Iw’   ‘~/tmp/scratch/xvfb-run.LaKu8K’ ‘~/tmp/scratch/xvfb-run.QMhjJE’   ‘~/tmp/scratch/xvfb-run.SbmXUW’ ‘~/tmp/scratch/xvfb-run.ToGBvB’   ‘~/tmp/scratch/xvfb-run.UPUd1Y’ ‘~/tmp/scratch/xvfb-run.VPmpYD’   ‘~/tmp/scratch/xvfb-run.XaSpXp’ ‘~/tmp/scratch/xvfb-run.XkDDPX’   ‘~/tmp/scratch/xvfb-run.Yj7HX0’ ‘~/tmp/scratch/xvfb-run.ZCgr8n’   ‘~/tmp/scratch/xvfb-run.ZT9Xkt’ ‘~/tmp/scratch/xvfb-run.aagNRb’   ‘~/tmp/scratch/xvfb-run.bNP0tY’ ‘~/tmp/scratch/xvfb-run.bgPYvG’   ‘~/tmp/scratch/xvfb-run.bpCF0r’ ‘~/tmp/scratch/xvfb-run.c5BodO’   ‘~/tmp/scratch/xvfb-run.cicIxJ’ ‘~/tmp/scratch/xvfb-run.e9M9VH’   ‘~/tmp/scratch/xvfb-run.eJhPsr’ ‘~/tmp/scratch/xvfb-run.f56jhK’   ‘~/tmp/scratch/xvfb-run.fyNLdW’ ‘~/tmp/scratch/xvfb-run.gSqQIq’   ‘~/tmp/scratch/xvfb-run.gedFsz’ ‘~/tmp/scratch/xvfb-run.k6Tt81’   ‘~/tmp/scratch/xvfb-run.kFBHYW’ ‘~/tmp/scratch/xvfb-run.kq3BbM’   ‘~/tmp/scratch/xvfb-run.mm5wKI’ ‘~/tmp/scratch/xvfb-run.pvjEsz’   ‘~/tmp/scratch/xvfb-run.rKHyhQ’ ‘~/tmp/scratch/xvfb-run.ryRdol’   ‘~/tmp/scratch/xvfb-run.swWs3k’ ‘~/tmp/scratch/xvfb-run.u3FsO5’   ‘~/tmp/scratch/xvfb-run.uhvJ16’ ‘~/tmp/scratch/xvfb-run.yTQAXT’   ‘~/tmp/scratch/xvfb-run.zhdz5T’
• DONE

Status: 1 NOTE