• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 16:46:39 UTC
• checking for file ‘pbatR/DESCRIPTION’ ... OK
• this is package ‘pbatR’ version ‘2.2-17’
• checking CRAN incoming feasibility ... [1s/1s] NOTE Maintainer: ‘Thomas Hoffmann <tjhoffm@gmail.com>’ No Authors@R field in DESCRIPTION. Please add one, modifying   Authors@R: c(person(given = "Thomas",                       family = "Hoffmann",                       role = c("aut", "cre"),                       email = "tjhoffm@gmail.com"),                person(given = c("with", "contributions", "from", "Christoph"),                       family = "Lange",                       role = "aut",                       email = "clange@hsph.harvard.edu")) as necessary.
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘pbatR’ can be installed ... OK See the install log for details.
• used C compiler: ‘gcc-16 (Debian 16.1.0-3) 16.1.0’
• used C++ compiler: ‘g++-16 (Debian 16.1.0-3) 16.1.0’
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s/3s] OK
• checking whether the package can be loaded with stated dependencies ... [2s/3s] OK
• checking whether the package can be unloaded cleanly ... [2s/3s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s/3s] OK
• checking whether the namespace can be unloaded cleanly ... [2s/3s] OK
• checking loading without being on the library search path ... [2s/3s] OK
• checking whether startup messages can be suppressed ... [2s/3s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [21s/26s] OK
• checking Rd files ... [0s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking use of PKG_*FLAGS in Makefiles ... OK
• checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking examples ... [2s/2s] OK
• checking PDF version of manual ... [5s/8s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0ltRfh’ ‘~/tmp/scratch/Rtmp1iK08r’   ‘~/tmp/scratch/Rtmp1yJbdo’ ‘~/tmp/scratch/Rtmp2OhaUR’   ‘~/tmp/scratch/Rtmp2RZZ9o’ ‘~/tmp/scratch/Rtmp2h3wwK’   ‘~/tmp/scratch/Rtmp3AyUsZ’ ‘~/tmp/scratch/Rtmp3JXiWv’   ‘~/tmp/scratch/Rtmp3qNLRb’ ‘~/tmp/scratch/Rtmp3zpiM2’   ‘~/tmp/scratch/Rtmp4689Ke’ ‘~/tmp/scratch/Rtmp47st8q’   ‘~/tmp/scratch/Rtmp4Sur0p’ ‘~/tmp/scratch/Rtmp4VM0d8’   ‘~/tmp/scratch/Rtmp4W1UvV’ ‘~/tmp/scratch/Rtmp5j3fwr’   ‘~/tmp/scratch/Rtmp60uwPl’ ‘~/tmp/scratch/Rtmp6V7Ypk’   ‘~/tmp/scratch/Rtmp6ZCD7p’ ‘~/tmp/scratch/Rtmp6ieYEz’   ‘~/tmp/scratch/Rtmp7TP7ac’ ‘~/tmp/scratch/Rtmp7k7Xd3’   ‘~/tmp/scratch/Rtmp8QwCTZ’ ‘~/tmp/scratch/Rtmp8pWWQf’   ‘~/tmp/scratch/Rtmp9AIR0L’ ‘~/tmp/scratch/Rtmp9DP7QG’   ‘~/tmp/scratch/Rtmp9Qz1JH’ ‘~/tmp/scratch/Rtmp9wlowA’   ‘~/tmp/scratch/RtmpA4AtPb’ ‘~/tmp/scratch/RtmpBBCJnI’   ‘~/tmp/scratch/RtmpCSFQrf’ ‘~/tmp/scratch/RtmpCd072c’   ‘~/tmp/scratch/RtmpDfI0eY’ ‘~/tmp/scratch/RtmpDrvgqb’   ‘~/tmp/scratch/RtmpEINCjF’ ‘~/tmp/scratch/RtmpEK87Xv’   ‘~/tmp/scratch/RtmpEQEXak’ ‘~/tmp/scratch/RtmpExTG7G’   ‘~/tmp/scratch/RtmpFMNNfV’ ‘~/tmp/scratch/RtmpFXn8lN’   ‘~/tmp/scratch/RtmpGQdqRx’ ‘~/tmp/scratch/RtmpGT29Ko’   ‘~/tmp/scratch/RtmpHAZ8bG’ ‘~/tmp/scratch/RtmpHBQ73d’   ‘~/tmp/scratch/RtmpHjPDii’ ‘~/tmp/scratch/RtmpHxnYSg’   ‘~/tmp/scratch/RtmpIqMAyC’ ‘~/tmp/scratch/RtmpKfsrF1’   ‘~/tmp/scratch/RtmpLgdVyC’ ‘~/tmp/scratch/RtmpLglNpm’   ‘~/tmp/scratch/RtmpLjhwWX’ ‘~/tmp/scratch/RtmpNe5InC’   ‘~/tmp/scratch/RtmpOUn3QL’ ‘~/tmp/scratch/RtmpOnJ1Bu’   ‘~/tmp/scratch/RtmpPjmMuF’ ‘~/tmp/scratch/RtmpQgX94c’   ‘~/tmp/scratch/RtmpRUjEKe’ ‘~/tmp/scratch/RtmpRWRPha’   ‘~/tmp/scratch/RtmpSdqAy9’ ‘~/tmp/scratch/RtmpTZJMuy’   ‘~/tmp/scratch/RtmpTbbhiG’ ‘~/tmp/scratch/RtmpTc6qJu’   ‘~/tmp/scratch/RtmpTuAqw1’ ‘~/tmp/scratch/RtmpTysdPU’   ‘~/tmp/scratch/RtmpUsZprT’ ‘~/tmp/scratch/RtmpVDvA0c’   ‘~/tmp/scratch/RtmpXaY2YU’ ‘~/tmp/scratch/RtmpYROgeF’   ‘~/tmp/scratch/RtmpYcXEAa’ ‘~/tmp/scratch/RtmpYk7YBn’   ‘~/tmp/scratch/RtmpYqMbFB’ ‘~/tmp/scratch/RtmpZUI8Ze’   ‘~/tmp/scratch/RtmpZkOPUg’ ‘~/tmp/scratch/RtmpZmoixR’   ‘~/tmp/scratch/RtmpaL5FfK’ ‘~/tmp/scratch/RtmpbVe7Jl’   ‘~/tmp/scratch/RtmpcQWgh7’ ‘~/tmp/scratch/RtmpdVmvwu’   ‘~/tmp/scratch/Rtmpdfh2XJ’ ‘~/tmp/scratch/RtmpeAPfav’   ‘~/tmp/scratch/RtmpekZGAZ’ ‘~/tmp/scratch/RtmpesYEX3’   ‘~/tmp/scratch/RtmpezjBz2’ ‘~/tmp/scratch/RtmpfBRMGO’   ‘~/tmp/scratch/RtmpfdmIvb’ ‘~/tmp/scratch/Rtmpg2mf3O’   ‘~/tmp/scratch/RtmpgABqn3’ ‘~/tmp/scratch/RtmpgwYCTE’   ‘~/tmp/scratch/RtmpheZENf’ ‘~/tmp/scratch/RtmphjUbiu’   ‘~/tmp/scratch/Rtmphk9X1X’ ‘~/tmp/scratch/Rtmpi6TMHw’   ‘~/tmp/scratch/RtmpiVlikx’ ‘~/tmp/scratch/Rtmpia600M’   ‘~/tmp/scratch/Rtmpims6wU’ ‘~/tmp/scratch/Rtmpip6fMc’   ‘~/tmp/scratch/RtmpjGE5Hy’ ‘~/tmp/scratch/RtmpjMJpyi’   ‘~/tmp/scratch/RtmpkNnqcs’ ‘~/tmp/scratch/Rtmpko3SkP’   ‘~/tmp/scratch/Rtmpkwfh4u’ ‘~/tmp/scratch/RtmplEpJWW’   ‘~/tmp/scratch/RtmplH93aG’ ‘~/tmp/scratch/RtmplZOOfi’   ‘~/tmp/scratch/Rtmpmk8Vlx’ ‘~/tmp/scratch/RtmpmkLRzx’   ‘~/tmp/scratch/RtmpmysrAA’ ‘~/tmp/scratch/RtmpnTWtTl’   ‘~/tmp/scratch/RtmpnhGvzO’ ‘~/tmp/scratch/RtmpoIxXb7’   ‘~/tmp/scratch/RtmpqKrQbs’ ‘~/tmp/scratch/RtmpqMeb6o’   ‘~/tmp/scratch/Rtmpr38fLK’ ‘~/tmp/scratch/Rtmpr66bWo’   ‘~/tmp/scratch/RtmprAzhru’ ‘~/tmp/scratch/RtmprByOVa’   ‘~/tmp/scratch/RtmprE6mvA’ ‘~/tmp/scratch/RtmpseOfc9’   ‘~/tmp/scratch/RtmpskhqNm’ ‘~/tmp/scratch/Rtmptmj3HY’   ‘~/tmp/scratch/RtmpuSg34m’ ‘~/tmp/scratch/RtmpvrTicV’   ‘~/tmp/scratch/RtmpvtulSF’ ‘~/tmp/scratch/RtmpwgFKmP’   ‘~/tmp/scratch/RtmpyGDQ0T’ ‘~/tmp/scratch/RtmpyVub8p’   ‘~/tmp/scratch/Rtmpymj4GA’ ‘~/tmp/scratch/RtmpypnUN0’   ‘~/tmp/scratch/RtmpzgJCtS’ ‘~/tmp/scratch/Rtmpzizpfp’   ‘~/tmp/scratch/Rtmpzz2rvO’ ‘~/tmp/scratch/xvfb-run.1DMNrg’   ‘~/tmp/scratch/xvfb-run.1dSAC1’ ‘~/tmp/scratch/xvfb-run.2G3gsY’   ‘~/tmp/scratch/xvfb-run.2rvyc7’ ‘~/tmp/scratch/xvfb-run.4UT20H’   ‘~/tmp/scratch/xvfb-run.4jksXU’ ‘~/tmp/scratch/xvfb-run.5TyhDg’   ‘~/tmp/scratch/xvfb-run.8JVeD9’ ‘~/tmp/scratch/xvfb-run.9q5tNE’   ‘~/tmp/scratch/xvfb-run.AHwiOF’ ‘~/tmp/scratch/xvfb-run.AV5qPr’   ‘~/tmp/scratch/xvfb-run.AlXclp’ ‘~/tmp/scratch/xvfb-run.Aw2DLX’   ‘~/tmp/scratch/xvfb-run.BR5L4k’ ‘~/tmp/scratch/xvfb-run.BT05VJ’   ‘~/tmp/scratch/xvfb-run.CdMnaM’ ‘~/tmp/scratch/xvfb-run.CipdRW’   ‘~/tmp/scratch/xvfb-run.Cm20mf’ ‘~/tmp/scratch/xvfb-run.F9hAvz’   ‘~/tmp/scratch/xvfb-run.GwOGZ6’ ‘~/tmp/scratch/xvfb-run.I6zKxt’   ‘~/tmp/scratch/xvfb-run.J8gZtP’ ‘~/tmp/scratch/xvfb-run.JKzXr5’   ‘~/tmp/scratch/xvfb-run.K57xr8’ ‘~/tmp/scratch/xvfb-run.PQuHRu’   ‘~/tmp/scratch/xvfb-run.RSAARG’ ‘~/tmp/scratch/xvfb-run.SekQnc’   ‘~/tmp/scratch/xvfb-run.ThNLMJ’ ‘~/tmp/scratch/xvfb-run.UjIbsA’   ‘~/tmp/scratch/xvfb-run.VvLp91’ ‘~/tmp/scratch/xvfb-run.WEa4xF’   ‘~/tmp/scratch/xvfb-run.X7RnHh’ ‘~/tmp/scratch/xvfb-run.XujblN’   ‘~/tmp/scratch/xvfb-run.Yvv0zu’ ‘~/tmp/scratch/xvfb-run.dpazio’   ‘~/tmp/scratch/xvfb-run.eVxN1m’ ‘~/tmp/scratch/xvfb-run.fjjqMi’   ‘~/tmp/scratch/xvfb-run.h96Tvn’ ‘~/tmp/scratch/xvfb-run.hHBN3L’   ‘~/tmp/scratch/xvfb-run.iEAphM’ ‘~/tmp/scratch/xvfb-run.j6aPmO’   ‘~/tmp/scratch/xvfb-run.jZ4Hcg’ ‘~/tmp/scratch/xvfb-run.lORRrt’   ‘~/tmp/scratch/xvfb-run.mudWn8’ ‘~/tmp/scratch/xvfb-run.pF9UTM’   ‘~/tmp/scratch/xvfb-run.qCUbDx’ ‘~/tmp/scratch/xvfb-run.qV6zev’   ‘~/tmp/scratch/xvfb-run.qYnsZ8’ ‘~/tmp/scratch/xvfb-run.qlPBMf’   ‘~/tmp/scratch/xvfb-run.rPifQy’ ‘~/tmp/scratch/xvfb-run.tHtKZk’   ‘~/tmp/scratch/xvfb-run.unTTG5’ ‘~/tmp/scratch/xvfb-run.w0uMa2’   ‘/dev/shm/sm_segment.gimli1.1001.19120000.0’   ‘/dev/shm/sm_segment.gimli1.1001.1a2a0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.1bb70000.0’   ‘/dev/shm/sm_segment.gimli1.1001.1e960000.0’   ‘/dev/shm/sm_segment.gimli1.1001.24340000.0’   ‘/dev/shm/sm_segment.gimli1.1001.26970000.0’   ‘/dev/shm/sm_segment.gimli1.1001.32d90000.0’   ‘/dev/shm/sm_segment.gimli1.1001.3560000.0’   ‘/dev/shm/sm_segment.gimli1.1001.3da00000.0’   ‘/dev/shm/sm_segment.gimli1.1001.3e800000.0’   ‘/dev/shm/sm_segment.gimli1.1001.49c60000.0’   ‘/dev/shm/sm_segment.gimli1.1001.4c070000.0’   ‘/dev/shm/sm_segment.gimli1.1001.4f430000.0’   ‘/dev/shm/sm_segment.gimli1.1001.51d60000.0’   ‘/dev/shm/sm_segment.gimli1.1001.5acb0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.5d0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.5f8a0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.67f30000.0’   ‘/dev/shm/sm_segment.gimli1.1001.77bf0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.7bbd0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.7e70000.0’   ‘/dev/shm/sm_segment.gimli1.1001.81700000.0’   ‘/dev/shm/sm_segment.gimli1.1001.82550000.0’   ‘/dev/shm/sm_segment.gimli1.1001.82d60000.0’   ‘/dev/shm/sm_segment.gimli1.1001.96900000.0’   ‘/dev/shm/sm_segment.gimli1.1001.9d940000.0’   ‘/dev/shm/sm_segment.gimli1.1001.9e390000.0’   ‘/dev/shm/sm_segment.gimli1.1001.a2ce0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.a63a0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.a6cf0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.adfd0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.b8180000.0’   ‘/dev/shm/sm_segment.gimli1.1001.bad60000.0’   ‘/dev/shm/sm_segment.gimli1.1001.bda10000.0’   ‘/dev/shm/sm_segment.gimli1.1001.be240000.0’   ‘/dev/shm/sm_segment.gimli1.1001.c5b70000.0’   ‘/dev/shm/sm_segment.gimli1.1001.c6f50000.0’   ‘/dev/shm/sm_segment.gimli1.1001.c7640000.0’   ‘/dev/shm/sm_segment.gimli1.1001.cd7c0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.d0b10000.0’   ‘/dev/shm/sm_segment.gimli1.1001.d4f00000.0’   ‘/dev/shm/sm_segment.gimli1.1001.da230001.0’   ‘/dev/shm/sm_segment.gimli1.1001.da230001.1’   ‘/dev/shm/sm_segment.gimli1.1001.e9660000.0’   ‘/dev/shm/sm_segment.gimli1.1001.eaf70000.0’   ‘/dev/shm/sm_segment.gimli1.1001.f5010000.0’   ‘/dev/shm/sm_segment.gimli1.1001.fc3b0000.0’   ‘/dev/shm/sm_segment.gimli1.1001.fefd0000.0’   ‘~/.cache/pocl/uncached/tempfile_0K4HG5’   ‘~/.cache/pocl/uncached/tempfile_1dxtRQ’   ‘~/.cache/pocl/uncached/tempfile_4z01PT’   ‘~/.cache/pocl/uncached/tempfile_6Y7Y8X’   ‘~/.cache/pocl/uncached/tempfile_6Z0tul’   ‘~/.cache/pocl/uncached/tempfile_8AGRz8’   ‘~/.cache/pocl/uncached/tempfile_8jTv7B’   ‘~/.cache/pocl/uncached/tempfile_Bm2USW’   ‘~/.cache/pocl/uncached/tempfile_CzJAvf’   ‘~/.cache/pocl/uncached/tempfile_DOg881’   ‘~/.cache/pocl/uncached/tempfile_DtjIQg’   ‘~/.cache/pocl/uncached/tempfile_Hw2oVw’   ‘~/.cache/pocl/uncached/tempfile_IOaU8k’   ‘~/.cache/pocl/uncached/tempfile_IZii7X’   ‘~/.cache/pocl/uncached/tempfile_M7WY3Y’   ‘~/.cache/pocl/uncached/tempfile_OsoLYa’   ‘~/.cache/pocl/uncached/tempfile_QUgulZ’   ‘~/.cache/pocl/uncached/tempfile_VNdMhz’   ‘~/.cache/pocl/uncached/tempfile_VYzhbe’   ‘~/.cache/pocl/uncached/tempfile_YZRLyH’   ‘~/.cache/pocl/uncached/tempfile_bGZZTL’   ‘~/.cache/pocl/uncached/tempfile_cusjCX’   ‘~/.cache/pocl/uncached/tempfile_fjRk9u’   ‘~/.cache/pocl/uncached/tempfile_iAJOV2’   ‘~/.cache/pocl/uncached/tempfile_iUH4ab’   ‘~/.cache/pocl/uncached/tempfile_ilGCbv’   ‘~/.cache/pocl/uncached/tempfile_jx4Js9’   ‘~/.cache/pocl/uncached/tempfile_kGKpxC’   ‘~/.cache/pocl/uncached/tempfile_l1gNlI’   ‘~/.cache/pocl/uncached/tempfile_lI1iSz’   ‘~/.cache/pocl/uncached/tempfile_lIpYwx’   ‘~/.cache/pocl/uncached/tempfile_nflEHp’   ‘~/.cache/pocl/uncached/tempfile_on5eHU’   ‘~/.cache/pocl/uncached/tempfile_ouPzDz’   ‘~/.cache/pocl/uncached/tempfile_pfudYn’   ‘~/.cache/pocl/uncached/tempfile_qGSJeq’   ‘~/.cache/pocl/uncached/tempfile_qW1ctd’   ‘~/.cache/pocl/uncached/tempfile_t2aLjs’   ‘~/.cache/pocl/uncached/tempfile_t5BL1N’   ‘~/.cache/pocl/uncached/tempfile_vDXNSI’   ‘~/.cache/pocl/uncached/tempfile_wb3OZf’   ‘~/.cache/pocl/uncached/tempfile_xIHZFq’   ‘~/.cache/pocl/uncached/tempfile_xn8JqS’   ‘~/.cache/pocl/uncached/tempfile_zBnyip’   ‘~/.cache/pocl/uncached/tempfile_zJzzTQ’   ‘~/.cache/pocl/uncached/tempfile_zmbiId’
• DONE

Status: 2 NOTEs