• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 16:41:24 UTC
• checking for file ‘orthoDr/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘orthoDr’ version ‘0.6.8’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/3s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘orthoDr’ can be installed ... OK See the install log for details.
• used C++ compiler: ‘g++-16 (Debian 16.1.0-3) 16.1.0’
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [3s/3s] OK
• checking whether the package can be loaded with stated dependencies ... [3s/4s] OK
• checking whether the package can be unloaded cleanly ... [2s/4s] OK
• checking whether the namespace can be loaded with stated dependencies ... [3s/4s] OK
• checking whether the namespace can be unloaded cleanly ... [3s/4s] OK
• checking loading without being on the library search path ... [3s/3s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [16s/20s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking compilation flags in Makevars ... OK
• checking for GNU extensions in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking use of PKG_*FLAGS in Makefiles ... OK
• checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking examples ... [10s/11s] OK
• checking PDF version of manual ... [5s/7s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0XXDOZ’ ‘~/tmp/scratch/Rtmp0kgtWd’   ‘~/tmp/scratch/Rtmp1PQnuo’ ‘~/tmp/scratch/Rtmp1RyNWN’   ‘~/tmp/scratch/Rtmp1W5upC’ ‘~/tmp/scratch/Rtmp1x1UqP’   ‘~/tmp/scratch/Rtmp2NiEoF’ ‘~/tmp/scratch/Rtmp3m0EeQ’   ‘~/tmp/scratch/Rtmp3uSfjV’ ‘~/tmp/scratch/Rtmp4IUKZv’   ‘~/tmp/scratch/Rtmp4NFY1T’ ‘~/tmp/scratch/Rtmp4iUFiP’   ‘~/tmp/scratch/Rtmp5HHQU2’ ‘~/tmp/scratch/Rtmp5NMF7D’   ‘~/tmp/scratch/Rtmp5X6XVg’ ‘~/tmp/scratch/Rtmp5awA3O’   ‘~/tmp/scratch/Rtmp6g38vU’ ‘~/tmp/scratch/Rtmp6nXqQT’   ‘~/tmp/scratch/Rtmp7zj2Uk’ ‘~/tmp/scratch/Rtmp8A0SG5’   ‘~/tmp/scratch/Rtmp9XzHBh’ ‘~/tmp/scratch/RtmpA7JRIA’   ‘~/tmp/scratch/RtmpAApT1h’ ‘~/tmp/scratch/RtmpAP6Ynk’   ‘~/tmp/scratch/RtmpAUjjo6’ ‘~/tmp/scratch/RtmpAn9O7O’   ‘~/tmp/scratch/RtmpBDRB5h’ ‘~/tmp/scratch/RtmpBbG5Oh’   ‘~/tmp/scratch/RtmpCCW0ly’ ‘~/tmp/scratch/RtmpCaX5r1’   ‘~/tmp/scratch/RtmpDRPgZD’ ‘~/tmp/scratch/RtmpEBVIPV’   ‘~/tmp/scratch/RtmpEb0vqz’ ‘~/tmp/scratch/RtmpEkAnat’   ‘~/tmp/scratch/RtmpEnx3yM’ ‘~/tmp/scratch/RtmpFBJLbh’   ‘~/tmp/scratch/RtmpFefUkf’ ‘~/tmp/scratch/RtmpFzOsFE’   ‘~/tmp/scratch/RtmpGDxwDO’ ‘~/tmp/scratch/RtmpGZPTpX’   ‘~/tmp/scratch/RtmpGdYAcr’ ‘~/tmp/scratch/RtmpHj69uM’   ‘~/tmp/scratch/RtmpHqzBPC’ ‘~/tmp/scratch/RtmpJ7oJ9x’   ‘~/tmp/scratch/RtmpJRHvAt’ ‘~/tmp/scratch/RtmpJapxJr’   ‘~/tmp/scratch/RtmpJbNtiZ’ ‘~/tmp/scratch/RtmpJclY7Y’   ‘~/tmp/scratch/RtmpKHAL9I’ ‘~/tmp/scratch/RtmpL3veyi’   ‘~/tmp/scratch/RtmpLHpxJA’ ‘~/tmp/scratch/RtmpLUMfa2’   ‘~/tmp/scratch/RtmpMJvdoa’ ‘~/tmp/scratch/RtmpMMVq4Z’   ‘~/tmp/scratch/RtmpMPdcyU’ ‘~/tmp/scratch/RtmpNJaujV’   ‘~/tmp/scratch/RtmpNQFndk’ ‘~/tmp/scratch/RtmpNab5Ri’   ‘~/tmp/scratch/RtmpOZlhSc’ ‘~/tmp/scratch/RtmpObn8hs’   ‘~/tmp/scratch/RtmpP6Mcit’ ‘~/tmp/scratch/RtmpPdgYCV’   ‘~/tmp/scratch/RtmpPxL2ed’ ‘~/tmp/scratch/RtmpQ2DC1G’   ‘~/tmp/scratch/RtmpQ8HRdO’ ‘~/tmp/scratch/RtmpQLnNKv’   ‘~/tmp/scratch/RtmpQSOfYb’ ‘~/tmp/scratch/RtmpS5eHbv’   ‘~/tmp/scratch/RtmpS9rFOG’ ‘~/tmp/scratch/RtmpSazuu8’   ‘~/tmp/scratch/RtmpU6wbmu’ ‘~/tmp/scratch/RtmpUCRWWU’   ‘~/tmp/scratch/RtmpUl0K0c’ ‘~/tmp/scratch/RtmpUqCVI9’   ‘~/tmp/scratch/RtmpVYttok’ ‘~/tmp/scratch/RtmpWHLiPq’   ‘~/tmp/scratch/RtmpX2xwq8’ ‘~/tmp/scratch/RtmpXtVTjY’   ‘~/tmp/scratch/RtmpY2xWko’ ‘~/tmp/scratch/RtmpYMldlC’   ‘~/tmp/scratch/RtmpZTma4N’ ‘~/tmp/scratch/RtmpZXZfRf’   ‘~/tmp/scratch/RtmpZscvwt’ ‘~/tmp/scratch/RtmpZx3wdv’   ‘~/tmp/scratch/RtmpZzRgXy’ ‘~/tmp/scratch/Rtmpa6EpnM’   ‘~/tmp/scratch/RtmpbYpOmx’ ‘~/tmp/scratch/RtmpcVCwd2’   ‘~/tmp/scratch/RtmpdKcpXg’ ‘~/tmp/scratch/RtmpdiYjso’   ‘~/tmp/scratch/Rtmpf8T6Dp’ ‘~/tmp/scratch/RtmpfDSh3d’   ‘~/tmp/scratch/RtmpfjzKKS’ ‘~/tmp/scratch/Rtmpg0aLfL’   ‘~/tmp/scratch/Rtmpg2yrTB’ ‘~/tmp/scratch/RtmpgC5jwO’   ‘~/tmp/scratch/RtmpgXtKUK’ ‘~/tmp/scratch/RtmphIEVKy’   ‘~/tmp/scratch/RtmphVWTeO’ ‘~/tmp/scratch/RtmpiBGEyj’   ‘~/tmp/scratch/Rtmpic0yZ9’ ‘~/tmp/scratch/Rtmpiw9jjp’   ‘~/tmp/scratch/RtmpkfaGtm’ ‘~/tmp/scratch/RtmplLGYgK’   ‘~/tmp/scratch/RtmpldKADk’ ‘~/tmp/scratch/RtmploP4er’   ‘~/tmp/scratch/Rtmpm2Glr6’ ‘~/tmp/scratch/RtmpmYZ7nD’   ‘~/tmp/scratch/RtmpoDuqB2’ ‘~/tmp/scratch/RtmpopsxAk’   ‘~/tmp/scratch/RtmporyzlZ’ ‘~/tmp/scratch/RtmppCXSUa’   ‘~/tmp/scratch/Rtmppc8xkx’ ‘~/tmp/scratch/Rtmpq06XVH’   ‘~/tmp/scratch/Rtmpq6gqop’ ‘~/tmp/scratch/RtmpqGsfAi’   ‘~/tmp/scratch/RtmpqXaBlV’ ‘~/tmp/scratch/RtmpqiUigU’   ‘~/tmp/scratch/RtmprLu6NO’ ‘~/tmp/scratch/RtmprsAqPz’   ‘~/tmp/scratch/Rtmprugdj6’ ‘~/tmp/scratch/RtmpsBU86w’   ‘~/tmp/scratch/RtmpsRhEGB’ ‘~/tmp/scratch/RtmptHPiDE’   ‘~/tmp/scratch/RtmpuLo9DG’ ‘~/tmp/scratch/RtmpuXDEWG’   ‘~/tmp/scratch/RtmpuyDhVo’ ‘~/tmp/scratch/RtmpvxbKET’   ‘~/tmp/scratch/RtmpwMP4S5’ ‘~/tmp/scratch/RtmpxEH6ww’   ‘~/tmp/scratch/RtmpxFOEKP’ ‘~/tmp/scratch/RtmpxZmcgJ’   ‘~/tmp/scratch/Rtmpy9r3h6’ ‘~/tmp/scratch/RtmpyR8lpy’   ‘~/tmp/scratch/RtmpyWLUgn’ ‘~/tmp/scratch/RtmpyhvCmL’   ‘~/tmp/scratch/Rtmpyjjfqp’ ‘~/tmp/scratch/Rtmpz1d3Fz’   ‘~/tmp/scratch/Rtmpz3E7Kd’ ‘~/tmp/scratch/RtmpzGHyEg’   ‘~/tmp/scratch/Rtmpze9VxP’ ‘~/tmp/scratch/RtmpzqXxXA’   ‘~/tmp/scratch/RtmpztnRhf’ ‘~/tmp/scratch/RtmpzxelzN’   ‘~/tmp/scratch/xvfb-run.0m6c7u’ ‘~/tmp/scratch/xvfb-run.1mi5bQ’   ‘~/tmp/scratch/xvfb-run.32ADJu’ ‘~/tmp/scratch/xvfb-run.4Vx6Ol’   ‘~/tmp/scratch/xvfb-run.6ryU1a’ ‘~/tmp/scratch/xvfb-run.6scNKt’   ‘~/tmp/scratch/xvfb-run.71NOM2’ ‘~/tmp/scratch/xvfb-run.7LJXqw’   ‘~/tmp/scratch/xvfb-run.7WRMES’ ‘~/tmp/scratch/xvfb-run.7nRSNH’   ‘~/tmp/scratch/xvfb-run.8aqFQE’ ‘~/tmp/scratch/xvfb-run.9OtTdt’   ‘~/tmp/scratch/xvfb-run.BOMIzM’ ‘~/tmp/scratch/xvfb-run.BUpKNd’   ‘~/tmp/scratch/xvfb-run.BsgQju’ ‘~/tmp/scratch/xvfb-run.ELRZVP’   ‘~/tmp/scratch/xvfb-run.EgZBfc’ ‘~/tmp/scratch/xvfb-run.Eu9iXq’   ‘~/tmp/scratch/xvfb-run.EywKFe’ ‘~/tmp/scratch/xvfb-run.GjOsnp’   ‘~/tmp/scratch/xvfb-run.H6PKdT’ ‘~/tmp/scratch/xvfb-run.HG6v7q’   ‘~/tmp/scratch/xvfb-run.HxjYSN’ ‘~/tmp/scratch/xvfb-run.LG80QS’   ‘~/tmp/scratch/xvfb-run.MRejuS’ ‘~/tmp/scratch/xvfb-run.NH0x0j’   ‘~/tmp/scratch/xvfb-run.OPOzSw’ ‘~/tmp/scratch/xvfb-run.QFmgbV’   ‘~/tmp/scratch/xvfb-run.TwhONu’ ‘~/tmp/scratch/xvfb-run.U2EzWm’   ‘~/tmp/scratch/xvfb-run.X9z8fr’ ‘~/tmp/scratch/xvfb-run.XrUEU9’   ‘~/tmp/scratch/xvfb-run.Y46fsc’ ‘~/tmp/scratch/xvfb-run.ZoJ9vl’   ‘~/tmp/scratch/xvfb-run.aW86fS’ ‘~/tmp/scratch/xvfb-run.ayUVHD’   ‘~/tmp/scratch/xvfb-run.bAnoDk’ ‘~/tmp/scratch/xvfb-run.cdVtIX’   ‘~/tmp/scratch/xvfb-run.csfT4M’ ‘~/tmp/scratch/xvfb-run.eCgu18’   ‘~/tmp/scratch/xvfb-run.gYla7w’ ‘~/tmp/scratch/xvfb-run.h2skrw’   ‘~/tmp/scratch/xvfb-run.hb5Grz’ ‘~/tmp/scratch/xvfb-run.j6oDAu’   ‘~/tmp/scratch/xvfb-run.kM6mU6’ ‘~/tmp/scratch/xvfb-run.lJoW4P’   ‘~/tmp/scratch/xvfb-run.laZqIy’ ‘~/tmp/scratch/xvfb-run.mn0vFf’   ‘~/tmp/scratch/xvfb-run.nlEVIY’ ‘~/tmp/scratch/xvfb-run.nuSx0Y’   ‘~/tmp/scratch/xvfb-run.odMSBv’ ‘~/tmp/scratch/xvfb-run.qGviR4’   ‘~/tmp/scratch/xvfb-run.qizRQv’ ‘~/tmp/scratch/xvfb-run.rbZgXU’   ‘~/tmp/scratch/xvfb-run.t1x6nF’ ‘~/tmp/scratch/xvfb-run.tftu3V’   ‘~/tmp/scratch/xvfb-run.tsBv3s’ ‘~/tmp/scratch/xvfb-run.uXZL8z’   ‘~/tmp/scratch/xvfb-run.xmq3QD’ ‘~/tmp/scratch/xvfb-run.zNRmBC’
• DONE

Status: 1 NOTE