Check results for 'niaidMI'

using R Under development (unstable) (2026-07-30 r90327)
using platform: x86_64-pc-linux-gnu
R was compiled by gcc-16 (Debian 16.1.0-3) 16.1.0 GNU Fortran (Debian 16.1.0-3) 16.1.0
running under: Debian GNU/Linux forky/sid
using session charset: UTF-8 * current time: 2026-07-31 16:30:29 UTC
checking for file ‘niaidMI/DESCRIPTION’ ... OK
this is package ‘niaidMI’ version ‘1.1.0’
checking CRAN incoming feasibility ... [1s/1s] OK
checking package namespace information ... OK
checking package dependencies ... OK
checking if this is a source package ... OK
checking if there is a namespace ... OK
checking for executable files ... OK
checking for hidden files and directories ... OK
checking for portable file names ... OK
checking for sufficient/correct file permissions ... OK
checking whether package ‘niaidMI’ can be installed ... OK See the install log for details.
used C++ compiler: ‘g++-16 (Debian 16.1.0-3) 16.1.0’
checking package directory ... OK
checking for future file timestamps ... OK
checking DESCRIPTION meta-information ... OK
checking top-level files ... OK
checking for left-over files ... OK
checking index information ... OK
checking package subdirectories ... OK
checking code files for non-ASCII characters ... OK
checking R files for syntax errors ... OK
checking whether the package can be loaded ... [0s/0s] OK
checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
checking whether the package can be unloaded cleanly ... [0s/0s] OK
checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
checking loading without being on the library search path ... [0s/0s] OK
checking use of S3 registration ... OK
checking dependencies in R code ... OK
checking S3 generic/method consistency ... OK
checking replacement functions ... OK
checking foreign function calls ... OK
checking R code for possible problems ... [4s/6s] OK
checking Rd files ... [0s/0s] NOTE checkRd: (-1) bootstrap_param_est.Rd:52: Lost braces in \itemize; meant \describe ? checkRd: (-1) bootstrap_param_est.Rd:53: Lost braces in \itemize; meant \describe ? checkRd: (-1) bootstrap_param_est.Rd:54: Lost braces in \itemize; meant \describe ? checkRd: (-1) get_emission.Rd:25: Lost braces in \itemize; meant \describe ? checkRd: (-1) get_emission.Rd:26: Lost braces in \itemize; meant \describe ? checkRd: (-1) get_emission.Rd:27: Lost braces in \itemize; meant \describe ? checkRd: (-1) impute.Rd:51: Lost braces in \itemize; meant \describe ? checkRd: (-1) impute.Rd:52: Lost braces in \itemize; meant \describe ? checkRd: (-1) impute.Rd:53: Lost braces in \itemize; meant \describe ? checkRd: (-1) impute_ref.Rd:54: Lost braces in \itemize; meant \describe ? checkRd: (-1) impute_ref.Rd:55: Lost braces in \itemize; meant \describe ? checkRd: (-1) impute_ref.Rd:56: Lost braces in \itemize; meant \describe ? checkRd: (-1) sim_data.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) sim_data.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) sim_data.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checking Rd metadata ... OK
checking Rd line widths ... OK
checking Rd cross-references ... OK
checking for missing documentation entries ... OK
checking for code/documentation mismatches ... OK
checking Rd \usage sections ... OK
checking Rd contents ... OK
checking for unstated dependencies in examples ... OK
checking line endings in C/C++/Fortran sources/headers ... OK
checking pragmas in C/C++ headers and code ... OK
checking compilation flags used ... OK
checking compiled code ... OK
checking examples ... [7s/8s] OK
checking for unstated dependencies in ‘tests’ ... OK
checking tests ... [87s/113s] OK Running ‘testthat.R’ [87s/113s]
checking PDF version of manual ... [4s/5s] OK
checking HTML version of manual ... [0s/0s] OK
checking for non-standard things in the check directory ... OK
checking for new files in some other directories ... NOTE Found the following files/directories: ‘~/tmp/scratch/Rtmp0dO7Q3’ ‘~/tmp/scratch/Rtmp1KVyG2’ ‘~/tmp/scratch/Rtmp1rznrh’ ‘~/tmp/scratch/Rtmp25Nv45’ ‘~/tmp/scratch/Rtmp2JfoXE’ ‘~/tmp/scratch/Rtmp2rXewY’ ‘~/tmp/scratch/Rtmp2thGVU’ ‘~/tmp/scratch/Rtmp384B2s’ ‘~/tmp/scratch/Rtmp3Vlyos’ ‘~/tmp/scratch/Rtmp3q1TrH’ ‘~/tmp/scratch/Rtmp46nrCJ’ ‘~/tmp/scratch/Rtmp4E47Tl’ ‘~/tmp/scratch/Rtmp4mLYi7’ ‘~/tmp/scratch/Rtmp4nwDr9’ ‘~/tmp/scratch/Rtmp4sMRL4’ ‘~/tmp/scratch/Rtmp50crjy’ ‘~/tmp/scratch/Rtmp5MSLJw’ ‘~/tmp/scratch/Rtmp5dIGsb’ ‘~/tmp/scratch/Rtmp6EUXay’ ‘~/tmp/scratch/Rtmp6yGGEH’ ‘~/tmp/scratch/Rtmp72SEge’ ‘~/tmp/scratch/Rtmp7U1qGe’ ‘~/tmp/scratch/Rtmp7ZMdmg’ ‘~/tmp/scratch/Rtmp7j8vcY’ ‘~/tmp/scratch/Rtmp7vmjzN’ ‘~/tmp/scratch/Rtmp8FusGR’ ‘~/tmp/scratch/Rtmp8fJo0b’ ‘~/tmp/scratch/Rtmp9EibTf’ ‘~/tmp/scratch/Rtmp9TRP4U’ ‘~/tmp/scratch/RtmpAAB6GU’ ‘~/tmp/scratch/RtmpAPcW2A’ ‘~/tmp/scratch/RtmpAv11j8’ ‘~/tmp/scratch/RtmpAzGyZe’ ‘~/tmp/scratch/RtmpAzHqRu’ ‘~/tmp/scratch/RtmpC2L4BZ’ ‘~/tmp/scratch/RtmpC9NlSb’ ‘~/tmp/scratch/RtmpCJkasp’ ‘~/tmp/scratch/RtmpCVgjEs’ ‘~/tmp/scratch/RtmpDFhwc1’ ‘~/tmp/scratch/RtmpDnUYHr’ ‘~/tmp/scratch/RtmpDpPXDl’ ‘~/tmp/scratch/RtmpDu4Q5s’ ‘~/tmp/scratch/RtmpEKokJH’ ‘~/tmp/scratch/RtmpEW5Xex’ ‘~/tmp/scratch/RtmpF5Wlgp’ ‘~/tmp/scratch/RtmpFcJ8C0’ ‘~/tmp/scratch/RtmpFuqpRv’ ‘~/tmp/scratch/RtmpGW6wyl’ ‘~/tmp/scratch/RtmpHDMWUz’ ‘~/tmp/scratch/RtmpHcSgq3’ ‘~/tmp/scratch/RtmpHqLWkY’ ‘~/tmp/scratch/RtmpI2bmn5’ ‘~/tmp/scratch/RtmpI9nEhX’ ‘~/tmp/scratch/RtmpICxMVj’ ‘~/tmp/scratch/RtmpIPGSpW’ ‘~/tmp/scratch/RtmpIdp7j1’ ‘~/tmp/scratch/RtmpIfKYS3’ ‘~/tmp/scratch/RtmpIr7aJY’ ‘~/tmp/scratch/RtmpIvXthu’ ‘~/tmp/scratch/RtmpJN7Q36’ ‘~/tmp/scratch/RtmpK3gn1N’ ‘~/tmp/scratch/RtmpKP9hvz’ ‘~/tmp/scratch/RtmpKZQWms’ ‘~/tmp/scratch/RtmpKcTmjG’ ‘~/tmp/scratch/RtmpM4CAcw’ ‘~/tmp/scratch/RtmpMALDjj’ ‘~/tmp/scratch/RtmpNOel9I’ ‘~/tmp/scratch/RtmpNfYFmj’ ‘~/tmp/scratch/RtmpNsZqzT’ ‘~/tmp/scratch/RtmpOSj5OP’ ‘~/tmp/scratch/RtmpP1Ath4’ ‘~/tmp/scratch/RtmpPNAWLK’ ‘~/tmp/scratch/RtmpPOASD2’ ‘~/tmp/scratch/RtmpQA4ZGk’ ‘~/tmp/scratch/RtmpQBtDXs’ ‘~/tmp/scratch/RtmpQCwqNi’ ‘~/tmp/scratch/RtmpRrF03D’ ‘~/tmp/scratch/RtmpUGXBJL’ ‘~/tmp/scratch/RtmpUGfFM6’ ‘~/tmp/scratch/RtmpUSwzys’ ‘~/tmp/scratch/RtmpUbZf4M’ ‘~/tmp/scratch/RtmpVX2Zuk’ ‘~/tmp/scratch/RtmpVgZdkv’ ‘~/tmp/scratch/RtmpVkWSrD’ ‘~/tmp/scratch/RtmpW7mhvO’ ‘~/tmp/scratch/RtmpW8m0Gq’ ‘~/tmp/scratch/RtmpWrSilP’ ‘~/tmp/scratch/RtmpYI7xsr’ ‘~/tmp/scratch/RtmpYe6jMj’ ‘~/tmp/scratch/RtmpYmK1hb’ ‘~/tmp/scratch/RtmpZ3TOx1’ ‘~/tmp/scratch/RtmpZZWYX2’ ‘~/tmp/scratch/RtmpZhwd4U’ ‘~/tmp/scratch/RtmpZmfgps’ ‘~/tmp/scratch/Rtmpa9aonm’ ‘~/tmp/scratch/Rtmpar5GQF’ ‘~/tmp/scratch/RtmpbkXs6b’ ‘~/tmp/scratch/Rtmpbu2E2g’ ‘~/tmp/scratch/RtmpdgB9Se’ ‘~/tmp/scratch/RtmpdiQxCG’ ‘~/tmp/scratch/RtmpdzGN2A’ ‘~/tmp/scratch/Rtmpe9v33Z’ ‘~/tmp/scratch/RtmpeBELYS’ ‘~/tmp/scratch/Rtmpee27RV’ ‘~/tmp/scratch/RtmpfC3Z8e’ ‘~/tmp/scratch/RtmpfiNZ0M’ ‘~/tmp/scratch/RtmpfzezD6’ ‘~/tmp/scratch/Rtmpg1Z3AK’ ‘~/tmp/scratch/Rtmpg3LTte’ ‘~/tmp/scratch/RtmpgG8RUs’ ‘~/tmp/scratch/Rtmph6azQW’ ‘~/tmp/scratch/RtmpiksXvg’ ‘~/tmp/scratch/RtmpjJ2Iqy’ ‘~/tmp/scratch/RtmpjN6WgO’ ‘~/tmp/scratch/Rtmpjre9E4’ ‘~/tmp/scratch/Rtmpk3HJKA’ ‘~/tmp/scratch/RtmplSrw59’ ‘~/tmp/scratch/RtmplitQ9P’ ‘~/tmp/scratch/Rtmpm1bUGM’ ‘~/tmp/scratch/RtmpmMyP8S’ ‘~/tmp/scratch/RtmpmVQN6U’ ‘~/tmp/scratch/RtmpmoPxRy’ ‘~/tmp/scratch/RtmpnZrkYz’ ‘~/tmp/scratch/Rtmpnf23kn’ ‘~/tmp/scratch/RtmpnifFMF’ ‘~/tmp/scratch/Rtmpo4eSz1’ ‘~/tmp/scratch/RtmpoLdwaY’ ‘~/tmp/scratch/RtmpoXCCSD’ ‘~/tmp/scratch/Rtmpomaahu’ ‘~/tmp/scratch/RtmpppjSJ9’ ‘~/tmp/scratch/RtmpqJBPH3’ ‘~/tmp/scratch/RtmpqrQeGw’ ‘~/tmp/scratch/RtmpsBoVRk’ ‘~/tmp/scratch/Rtmpt1SQ31’ ‘~/tmp/scratch/RtmptIRqYg’ ‘~/tmp/scratch/RtmptMw1M1’ ‘~/tmp/scratch/RtmptjZ8qi’ ‘~/tmp/scratch/RtmpuCSOfe’ ‘~/tmp/scratch/RtmpuCWwla’ ‘~/tmp/scratch/RtmpuzH5MN’ ‘~/tmp/scratch/Rtmpv6qqUH’ ‘~/tmp/scratch/RtmpvCfEjA’ ‘~/tmp/scratch/RtmpvPhX0l’ ‘~/tmp/scratch/RtmpwQ2wES’ ‘~/tmp/scratch/RtmpwexPtV’ ‘~/tmp/scratch/Rtmpx7lnlw’ ‘~/tmp/scratch/RtmpxBMNr9’ ‘~/tmp/scratch/RtmpyRcXL6’ ‘~/tmp/scratch/RtmpyT2MGV’ ‘~/tmp/scratch/Rtmpye0bfN’ ‘~/tmp/scratch/Rtmpz0yGKu’ ‘~/tmp/scratch/RtmpzAP2rj’ ‘~/tmp/scratch/RtmpzCIUZD’ ‘~/tmp/scratch/RtmpzvzCFb’ ‘~/tmp/scratch/cc1s9Tvw.s’ ‘~/tmp/scratch/ccMG4ZcO.s’ ‘~/tmp/scratch/xvfb-run.1eRoEH’ ‘~/tmp/scratch/xvfb-run.54TB7b’ ‘~/tmp/scratch/xvfb-run.59jUMU’ ‘~/tmp/scratch/xvfb-run.5SRq8k’ ‘~/tmp/scratch/xvfb-run.5dHhdX’ ‘~/tmp/scratch/xvfb-run.5nt6Lu’ ‘~/tmp/scratch/xvfb-run.ANcOhb’ ‘~/tmp/scratch/xvfb-run.AoJbhj’ ‘~/tmp/scratch/xvfb-run.BoogPO’ ‘~/tmp/scratch/xvfb-run.E2xqOK’ ‘~/tmp/scratch/xvfb-run.EWntCY’ ‘~/tmp/scratch/xvfb-run.FSduGd’ ‘~/tmp/scratch/xvfb-run.GCPXpU’ ‘~/tmp/scratch/xvfb-run.HEH8Ne’ ‘~/tmp/scratch/xvfb-run.IQF4x0’ ‘~/tmp/scratch/xvfb-run.KgSEHx’ ‘~/tmp/scratch/xvfb-run.KzevnS’ ‘~/tmp/scratch/xvfb-run.LiQPGN’ ‘~/tmp/scratch/xvfb-run.MAfTDB’ ‘~/tmp/scratch/xvfb-run.MAtcNl’ ‘~/tmp/scratch/xvfb-run.MlTKoO’ ‘~/tmp/scratch/xvfb-run.N8eeA5’ ‘~/tmp/scratch/xvfb-run.NMtVHF’ ‘~/tmp/scratch/xvfb-run.NhaJTR’ ‘~/tmp/scratch/xvfb-run.OSj4Xj’ ‘~/tmp/scratch/xvfb-run.OwmFvk’ ‘~/tmp/scratch/xvfb-run.PeDlPy’ ‘~/tmp/scratch/xvfb-run.Rpk6lG’ ‘~/tmp/scratch/xvfb-run.TbdHDu’ ‘~/tmp/scratch/xvfb-run.U3LDtE’ ‘~/tmp/scratch/xvfb-run.VDZ95P’ ‘~/tmp/scratch/xvfb-run.VccptN’ ‘~/tmp/scratch/xvfb-run.VtSUrS’ ‘~/tmp/scratch/xvfb-run.X7UZVL’ ‘~/tmp/scratch/xvfb-run.XSq1aj’ ‘~/tmp/scratch/xvfb-run.ZfhyCc’ ‘~/tmp/scratch/xvfb-run.aXa1PV’ ‘~/tmp/scratch/xvfb-run.au3xz6’ ‘~/tmp/scratch/xvfb-run.awDNmg’ ‘~/tmp/scratch/xvfb-run.b90dSR’ ‘~/tmp/scratch/xvfb-run.cQAfbW’ ‘~/tmp/scratch/xvfb-run.dmKf4F’ ‘~/tmp/scratch/xvfb-run.gOacpU’ ‘~/tmp/scratch/xvfb-run.h2jOp5’ ‘~/tmp/scratch/xvfb-run.iQWNdM’ ‘~/tmp/scratch/xvfb-run.j8psiW’ ‘~/tmp/scratch/xvfb-run.k1lXqf’ ‘~/tmp/scratch/xvfb-run.l4Rz8p’ ‘~/tmp/scratch/xvfb-run.mI9Xk8’ ‘~/tmp/scratch/xvfb-run.neTSBA’ ‘~/tmp/scratch/xvfb-run.o796Ke’ ‘~/tmp/scratch/xvfb-run.ouETpu’ ‘~/tmp/scratch/xvfb-run.p4qAXL’ ‘~/tmp/scratch/xvfb-run.pFR87B’ ‘~/tmp/scratch/xvfb-run.pVtQiV’ ‘~/tmp/scratch/xvfb-run.pf1kUF’ ‘~/tmp/scratch/xvfb-run.qVtHOG’ ‘~/tmp/scratch/xvfb-run.rRB9oH’ ‘~/tmp/scratch/xvfb-run.rROAqR’ ‘~/tmp/scratch/xvfb-run.sTPsp7’ ‘~/tmp/scratch/xvfb-run.snUD5x’ ‘~/tmp/scratch/xvfb-run.u1g8td’ ‘~/tmp/scratch/xvfb-run.wekhnK’ ‘~/tmp/scratch/xvfb-run.xCyT3P’ ‘~/tmp/scratch/xvfb-run.xULk4U’
DONE

Status: 2 NOTEs