Check results for 'neuroim2'

using R Under development (unstable) (2026-07-30 r90327)
using platform: x86_64-pc-linux-gnu
R was compiled by gcc-16 (Debian 16.1.0-3) 16.1.0 GNU Fortran (Debian 16.1.0-3) 16.1.0
running under: Debian GNU/Linux forky/sid
using session charset: UTF-8 * current time: 2026-07-31 16:29:21 UTC
checking for file ‘neuroim2/DESCRIPTION’ ... OK
checking extension type ... Package
this is package ‘neuroim2’ version ‘0.13.0’
package encoding: UTF-8
checking CRAN incoming feasibility ... [2s/3s] OK
checking package namespace information ... OK
checking package dependencies ... OK
checking if this is a source package ... OK
checking if there is a namespace ... OK
checking for executable files ... OK
checking for hidden files and directories ... OK
checking for portable file names ... OK
checking for sufficient/correct file permissions ... OK
checking whether package ‘neuroim2’ can be installed ... OK See the install log for details.
used C++ compiler: ‘g++-16 (Debian 16.1.0-3) 16.1.0’
checking C++ specification ... INFO specified C++17
checking package directory ... OK
checking for future file timestamps ... OK
checking ‘build’ directory ... OK
checking DESCRIPTION meta-information ... OK
checking top-level files ... OK
checking for left-over files ... OK
checking index information ... OK
checking package subdirectories ... OK
checking code files for non-ASCII characters ... OK
checking R files for syntax errors ... OK
checking whether the package can be loaded ... [3s/5s] OK
checking whether the package can be loaded with stated dependencies ... [4s/4s] OK
checking whether the package can be unloaded cleanly ... [3s/4s] OK
checking whether the namespace can be loaded with stated dependencies ... [4s/5s] OK
checking whether the namespace can be unloaded cleanly ... [4s/5s] OK
checking loading without being on the library search path ... [3s/5s] OK
checking use of S3 registration ... OK
checking dependencies in R code ... OK
checking S3 generic/method consistency ... OK
checking replacement functions ... OK
checking foreign function calls ... OK
checking R code for possible problems ... [37s/49s] OK
checking Rd files ... [2s/2s] OK
checking Rd metadata ... OK
checking Rd line widths ... OK
checking Rd cross-references ... OK
checking for missing documentation entries ... OK
checking for code/documentation mismatches ... OK
checking Rd \usage sections ... OK
checking Rd contents ... NOTE Rd files without \usage: ‘as-ClusteredNeuroVol-DenseNeuroVol.Rd’ ‘as.raster.Rd’ ‘image.Rd’ \arguments should not be documented without \usage.
checking for unstated dependencies in examples ... OK
checking line endings in C/C++/Fortran sources/headers ... OK
checking line endings in Makefiles ... OK
checking compilation flags in Makevars ... OK
checking for GNU extensions in Makefiles ... OK
checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
checking use of PKG_*FLAGS in Makefiles ... OK
checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
checking pragmas in C/C++ headers and code ... OK
checking compilation flags used ... OK
checking compiled code ... OK
checking installed files from ‘inst/doc’ ... OK
checking files in ‘vignettes’ ... OK
checking examples ... [10s/15s] OK
checking for unstated dependencies in ‘tests’ ... OK
checking tests ... [135s/166s] OK Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [134s/165s]
checking for unstated dependencies in vignettes ... OK
checking package vignettes ... OK
checking re-building of vignette outputs ... [112s/154s] OK
checking PDF version of manual ... [12s/18s] OK
checking HTML version of manual ... [5s/7s] OK
checking for non-standard things in the check directory ... OK
checking for new files in some other directories ... NOTE Found the following files/directories: ‘~/tmp/scratch/Rtmp06dXVy’ ‘~/tmp/scratch/Rtmp0fp1Ga’ ‘~/tmp/scratch/Rtmp12jssR’ ‘~/tmp/scratch/Rtmp1KVyG2’ ‘~/tmp/scratch/Rtmp1djSYr’ ‘~/tmp/scratch/Rtmp1gc3Ac’ ‘~/tmp/scratch/Rtmp1ubNyL’ ‘~/tmp/scratch/Rtmp4JzT8y’ ‘~/tmp/scratch/Rtmp4iV7kw’ ‘~/tmp/scratch/Rtmp4mIYj5’ ‘~/tmp/scratch/Rtmp4tXoHO’ ‘~/tmp/scratch/Rtmp4wv5PB’ ‘~/tmp/scratch/Rtmp504HVq’ ‘~/tmp/scratch/Rtmp5Bmp5z’ ‘~/tmp/scratch/Rtmp5I2MGD’ ‘~/tmp/scratch/Rtmp5KkRbs’ ‘~/tmp/scratch/Rtmp5Nt04e’ ‘~/tmp/scratch/Rtmp5lHWVc’ ‘~/tmp/scratch/Rtmp6EXfig’ ‘~/tmp/scratch/Rtmp6SLlhJ’ ‘~/tmp/scratch/Rtmp7GCD06’ ‘~/tmp/scratch/Rtmp7TdAYD’ ‘~/tmp/scratch/Rtmp7TsiyF’ ‘~/tmp/scratch/Rtmp7bE8k8’ ‘~/tmp/scratch/Rtmp8QMFoB’ ‘~/tmp/scratch/Rtmp96rEmC’ ‘~/tmp/scratch/Rtmp9KOyP8’ ‘~/tmp/scratch/RtmpA0ZQR2’ ‘~/tmp/scratch/RtmpA2woaS’ ‘~/tmp/scratch/RtmpA4BWrt’ ‘~/tmp/scratch/RtmpAT4ngA’ ‘~/tmp/scratch/RtmpBBfkWS’ ‘~/tmp/scratch/RtmpBs0Vv7’ ‘~/tmp/scratch/RtmpCZ7ccv’ ‘~/tmp/scratch/RtmpDImeNn’ ‘~/tmp/scratch/RtmpDKIJT4’ ‘~/tmp/scratch/RtmpDkMkjn’ ‘~/tmp/scratch/RtmpDnXPsP’ ‘~/tmp/scratch/RtmpEVDKU1’ ‘~/tmp/scratch/RtmpEcoMEr’ ‘~/tmp/scratch/RtmpGW6wyl’ ‘~/tmp/scratch/RtmpH3WQ61’ ‘~/tmp/scratch/RtmpH5uGqK’ ‘~/tmp/scratch/RtmpHMXH5O’ ‘~/tmp/scratch/RtmpHtR3wt’ ‘~/tmp/scratch/RtmpIAOucN’ ‘~/tmp/scratch/RtmpIFj039’ ‘~/tmp/scratch/RtmpIGMpas’ ‘~/tmp/scratch/RtmpIWTz9j’ ‘~/tmp/scratch/RtmpIisuiM’ ‘~/tmp/scratch/RtmpJ3IbuF’ ‘~/tmp/scratch/RtmpJsxffT’ ‘~/tmp/scratch/RtmpK2VpDI’ ‘~/tmp/scratch/RtmpK6KU0e’ ‘~/tmp/scratch/RtmpKn9dDd’ ‘~/tmp/scratch/RtmpLKu7Bj’ ‘~/tmp/scratch/RtmpM494u5’ ‘~/tmp/scratch/RtmpM8pUrm’ ‘~/tmp/scratch/RtmpMQtgX5’ ‘~/tmp/scratch/RtmpNIl9G2’ ‘~/tmp/scratch/RtmpNSPuvq’ ‘~/tmp/scratch/RtmpNZ1jGq’ ‘~/tmp/scratch/RtmpNbIeI7’ ‘~/tmp/scratch/RtmpNnu0rB’ ‘~/tmp/scratch/RtmpNsI0X3’ ‘~/tmp/scratch/RtmpO6L2y7’ ‘~/tmp/scratch/RtmpOcsEm4’ ‘~/tmp/scratch/RtmpP1YG2B’ ‘~/tmp/scratch/RtmpPZO7pW’ ‘~/tmp/scratch/RtmpPachJe’ ‘~/tmp/scratch/RtmpPe1pT3’ ‘~/tmp/scratch/RtmpR4QLaa’ ‘~/tmp/scratch/RtmpRDBbJr’ ‘~/tmp/scratch/RtmpRN1JI8’ ‘~/tmp/scratch/RtmpSKqaAx’ ‘~/tmp/scratch/RtmpSceQbx’ ‘~/tmp/scratch/RtmpSwIyQU’ ‘~/tmp/scratch/RtmpTXOHBc’ ‘~/tmp/scratch/RtmpTXnxBk’ ‘~/tmp/scratch/RtmpU69vnM’ ‘~/tmp/scratch/RtmpU8Loy7’ ‘~/tmp/scratch/RtmpUCEjIr’ ‘~/tmp/scratch/RtmpV9RHKH’ ‘~/tmp/scratch/RtmpVxcUMH’ ‘~/tmp/scratch/RtmpWB6tY8’ ‘~/tmp/scratch/RtmpWRm2mn’ ‘~/tmp/scratch/RtmpWnfM0z’ ‘~/tmp/scratch/RtmpXXyAvX’ ‘~/tmp/scratch/RtmpXhfgnK’ ‘~/tmp/scratch/RtmpYEwfHc’ ‘~/tmp/scratch/RtmpYFc2YN’ ‘~/tmp/scratch/RtmpYW3tJJ’ ‘~/tmp/scratch/RtmpYZP3ty’ ‘~/tmp/scratch/RtmpYnKY8S’ ‘~/tmp/scratch/RtmpZdA6Bu’ ‘~/tmp/scratch/RtmpZo2MSe’ ‘~/tmp/scratch/Rtmpa5euVu’ ‘~/tmp/scratch/RtmpaYDHlW’ ‘~/tmp/scratch/Rtmpaefn1H’ ‘~/tmp/scratch/RtmpajtTZy’ ‘~/tmp/scratch/Rtmparf6bi’ ‘~/tmp/scratch/RtmpcLBPsA’ ‘~/tmp/scratch/Rtmpd63idV’ ‘~/tmp/scratch/RtmpdCiVoX’ ‘~/tmp/scratch/Rtmpe7iHGx’ ‘~/tmp/scratch/RtmpeBNppP’ ‘~/tmp/scratch/RtmpfkgwsU’ ‘~/tmp/scratch/Rtmpg9n4BT’ ‘~/tmp/scratch/RtmpgAX2y2’ ‘~/tmp/scratch/RtmpgKQP0R’ ‘~/tmp/scratch/RtmpgML8nf’ ‘~/tmp/scratch/RtmpgjFJxu’ ‘~/tmp/scratch/RtmpglcMvO’ ‘~/tmp/scratch/RtmphFlHUP’ ‘~/tmp/scratch/RtmphdyT6Y’ ‘~/tmp/scratch/RtmphqhXZm’ ‘~/tmp/scratch/Rtmpi2F8Px’ ‘~/tmp/scratch/RtmpiE61kc’ ‘~/tmp/scratch/Rtmpj43Ug8’ ‘~/tmp/scratch/RtmpkPZoFN’ ‘~/tmp/scratch/RtmpkaRdLe’ ‘~/tmp/scratch/Rtmpkob1mQ’ ‘~/tmp/scratch/RtmplNHOlh’ ‘~/tmp/scratch/RtmplVh2T0’ ‘~/tmp/scratch/RtmpllU1YP’ ‘~/tmp/scratch/Rtmpm1VJHK’ ‘~/tmp/scratch/RtmpmEesRj’ ‘~/tmp/scratch/Rtmpn4yu6i’ ‘~/tmp/scratch/RtmpnQe3UZ’ ‘~/tmp/scratch/RtmpnTz3Iq’ ‘~/tmp/scratch/Rtmpp1oB9t’ ‘~/tmp/scratch/Rtmppf7A5g’ ‘~/tmp/scratch/Rtmppirps4’ ‘~/tmp/scratch/Rtmpq2sSt5’ ‘~/tmp/scratch/RtmpqDZYjt’ ‘~/tmp/scratch/RtmpqXWn37’ ‘~/tmp/scratch/RtmpqrObXG’ ‘~/tmp/scratch/RtmprPLiGw’ ‘~/tmp/scratch/Rtmps6nVP2’ ‘~/tmp/scratch/RtmpsIJnSQ’ ‘~/tmp/scratch/RtmpsVpR70’ ‘~/tmp/scratch/RtmpsujQMt’ ‘~/tmp/scratch/Rtmptpzgjt’ ‘~/tmp/scratch/Rtmptxqu8U’ ‘~/tmp/scratch/RtmpuPLfx9’ ‘~/tmp/scratch/RtmpuXMbz1’ ‘~/tmp/scratch/RtmpukOf6Z’ ‘~/tmp/scratch/RtmpvBoQMg’ ‘~/tmp/scratch/RtmpvVZT6R’ ‘~/tmp/scratch/Rtmpvf3oAj’ ‘~/tmp/scratch/Rtmpvpk0eV’ ‘~/tmp/scratch/Rtmpw1HpW1’ ‘~/tmp/scratch/RtmpwjIX0o’ ‘~/tmp/scratch/Rtmpx2irQX’ ‘~/tmp/scratch/RtmpxE7FKQ’ ‘~/tmp/scratch/RtmpxS8Z55’ ‘~/tmp/scratch/RtmpyPYYGd’ ‘~/tmp/scratch/Rtmpyfe0am’ ‘~/tmp/scratch/RtmpykRCev’ ‘~/tmp/scratch/Rtmpz1IfbI’ ‘~/tmp/scratch/RtmpzK1BKD’ ‘~/tmp/scratch/RtmpzVUbtZ’ ‘~/tmp/scratch/RtmpzZtPtN’ ‘~/tmp/scratch/RtmpzpXBdB’ ‘~/tmp/scratch/RtmpzpXsnE’ ‘~/tmp/scratch/RtmpzwZJY8’ ‘~/tmp/scratch/xvfb-run.0BAGDL’ ‘~/tmp/scratch/xvfb-run.0GeFVG’ ‘~/tmp/scratch/xvfb-run.131tm8’ ‘~/tmp/scratch/xvfb-run.1V1PZ5’ ‘~/tmp/scratch/xvfb-run.1XCclZ’ ‘~/tmp/scratch/xvfb-run.1oaDUo’ ‘~/tmp/scratch/xvfb-run.2sgJGz’ ‘~/tmp/scratch/xvfb-run.5BvY1q’ ‘~/tmp/scratch/xvfb-run.5wX7OV’ ‘~/tmp/scratch/xvfb-run.5y3ybs’ ‘~/tmp/scratch/xvfb-run.6jrPcs’ ‘~/tmp/scratch/xvfb-run.92s6b3’ ‘~/tmp/scratch/xvfb-run.AKCkxA’ ‘~/tmp/scratch/xvfb-run.APAi0A’ ‘~/tmp/scratch/xvfb-run.Ar52TX’ ‘~/tmp/scratch/xvfb-run.CAGMk4’ ‘~/tmp/scratch/xvfb-run.DHvMBj’ ‘~/tmp/scratch/xvfb-run.FClxTf’ ‘~/tmp/scratch/xvfb-run.FbpKlL’ ‘~/tmp/scratch/xvfb-run.FjvFFJ’ ‘~/tmp/scratch/xvfb-run.GGFPkH’ ‘~/tmp/scratch/xvfb-run.GpezSq’ ‘~/tmp/scratch/xvfb-run.H5WEAK’ ‘~/tmp/scratch/xvfb-run.KWaMlF’ ‘~/tmp/scratch/xvfb-run.Ktq1a4’ ‘~/tmp/scratch/xvfb-run.L5IBVP’ ‘~/tmp/scratch/xvfb-run.L7bOtr’ ‘~/tmp/scratch/xvfb-run.LW9Zt0’ ‘~/tmp/scratch/xvfb-run.LdYURe’ ‘~/tmp/scratch/xvfb-run.M8YmXS’ ‘~/tmp/scratch/xvfb-run.MGWD2j’ ‘~/tmp/scratch/xvfb-run.McM8vx’ ‘~/tmp/scratch/xvfb-run.MrNCUB’ ‘~/tmp/scratch/xvfb-run.NSX7Ut’ ‘~/tmp/scratch/xvfb-run.Ne1VOj’ ‘~/tmp/scratch/xvfb-run.P2ldxa’ ‘~/tmp/scratch/xvfb-run.PDilAc’ ‘~/tmp/scratch/xvfb-run.Q7NqgK’ ‘~/tmp/scratch/xvfb-run.QDirou’ ‘~/tmp/scratch/xvfb-run.SdUyO4’ ‘~/tmp/scratch/xvfb-run.ShP8Qg’ ‘~/tmp/scratch/xvfb-run.SnUSOy’ ‘~/tmp/scratch/xvfb-run.T8rH6O’ ‘~/tmp/scratch/xvfb-run.TLqldn’ ‘~/tmp/scratch/xvfb-run.V0xDFi’ ‘~/tmp/scratch/xvfb-run.VXT7PT’ ‘~/tmp/scratch/xvfb-run.WJBh2g’ ‘~/tmp/scratch/xvfb-run.WfOcc7’ ‘~/tmp/scratch/xvfb-run.YMSAr3’ ‘~/tmp/scratch/xvfb-run.YtjgtO’ ‘~/tmp/scratch/xvfb-run.aXa1PV’ ‘~/tmp/scratch/xvfb-run.bOC5UZ’ ‘~/tmp/scratch/xvfb-run.bjAQmD’ ‘~/tmp/scratch/xvfb-run.btUi11’ ‘~/tmp/scratch/xvfb-run.dhao20’ ‘~/tmp/scratch/xvfb-run.fqP9LA’ ‘~/tmp/scratch/xvfb-run.g4nDyA’ ‘~/tmp/scratch/xvfb-run.gPtwZ3’ ‘~/tmp/scratch/xvfb-run.i0ItNL’ ‘~/tmp/scratch/xvfb-run.iP64jl’ ‘~/tmp/scratch/xvfb-run.jhMIni’ ‘~/tmp/scratch/xvfb-run.jlwWax’ ‘~/tmp/scratch/xvfb-run.kLVW1M’ ‘~/tmp/scratch/xvfb-run.kg1OYj’ ‘~/tmp/scratch/xvfb-run.lETCTy’ ‘~/tmp/scratch/xvfb-run.ldMqLt’ ‘~/tmp/scratch/xvfb-run.oceOzn’ ‘~/tmp/scratch/xvfb-run.owaAW4’ ‘~/tmp/scratch/xvfb-run.pJAPYD’ ‘~/tmp/scratch/xvfb-run.q4VlkA’ ‘~/tmp/scratch/xvfb-run.qr5fr7’ ‘~/tmp/scratch/xvfb-run.rUlBzA’ ‘~/tmp/scratch/xvfb-run.s2ZzZt’ ‘~/tmp/scratch/xvfb-run.sTPsp7’ ‘~/tmp/scratch/xvfb-run.uoCRiE’ ‘~/tmp/scratch/xvfb-run.vGsoV8’ ‘~/tmp/scratch/xvfb-run.vv7zQC’ ‘~/tmp/scratch/xvfb-run.xCyQnh’ ‘~/tmp/scratch/xvfb-run.yNXWy3’ ‘~/tmp/scratch/xvfb-run.z6WPnp’ ‘~/tmp/scratch/xvfb-run.zLW78L’ ‘/dev/shm/sm_segment.gimli1.1001.21a60000.0’ ‘/dev/shm/sm_segment.gimli1.1001.3e230000.0’ ‘/dev/shm/sm_segment.gimli1.1001.48be0000.0’ ‘/dev/shm/sm_segment.gimli1.1001.51bf0000.0’ ‘/dev/shm/sm_segment.gimli1.1001.56e60000.0’ ‘/dev/shm/sm_segment.gimli1.1001.59510000.0’ ‘/dev/shm/sm_segment.gimli1.1001.5ad30000.0’ ‘/dev/shm/sm_segment.gimli1.1001.6c710000.0’ ‘/dev/shm/sm_segment.gimli1.1001.78b70000.0’ ‘/dev/shm/sm_segment.gimli1.1001.99e00000.0’ ‘/dev/shm/sm_segment.gimli1.1001.9efb0000.0’ ‘/dev/shm/sm_segment.gimli1.1001.be50000.0’ ‘/dev/shm/sm_segment.gimli1.1001.d0d40000.0’ ‘/dev/shm/sm_segment.gimli1.1001.de0e0000.0’ ‘/dev/shm/sm_segment.gimli1.1001.e6640000.0’ ‘/dev/shm/sm_segment.gimli1.1001.f1fa0000.0’ ‘~/.cache/pocl/uncached/tempfile_1xMkXc’ ‘~/.cache/pocl/uncached/tempfile_31YUI5’ ‘~/.cache/pocl/uncached/tempfile_5NKzn6’ ‘~/.cache/pocl/uncached/tempfile_8JUlZo’ ‘~/.cache/pocl/uncached/tempfile_DzT8TP’ ‘~/.cache/pocl/uncached/tempfile_LI14Ob’ ‘~/.cache/pocl/uncached/tempfile_N4M0va’ ‘~/.cache/pocl/uncached/tempfile_RHb5N9’ ‘~/.cache/pocl/uncached/tempfile_SDHoQi’ ‘~/.cache/pocl/uncached/tempfile_TnN3jE’ ‘~/.cache/pocl/uncached/tempfile_YALUlu’ ‘~/.cache/pocl/uncached/tempfile_cv9jF2’ ‘~/.cache/pocl/uncached/tempfile_e6MKRk’ ‘~/.cache/pocl/uncached/tempfile_h7inXj’ ‘~/.cache/pocl/uncached/tempfile_nMgM5T’ ‘~/.cache/pocl/uncached/tempfile_tybkm7’ ‘~/.cache/pocl/uncached/tempfile_xpPm8O’
DONE

Status: 2 NOTEs