• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 16:28:07 UTC
• checking for file ‘neotoma2/DESCRIPTION’ ... OK
• this is package ‘neotoma2’ version ‘1.0.12’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/3s] NOTE Maintainer: ‘Dominguez Vidana Socorro <dominguezvid@wisc.edu>’ Problems when reading CITATION file:   Replacing special names ‘.Names’ is deprecated; use ‘names’ instead.
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘neotoma2’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s/3s] OK
• checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
• checking whether the package can be unloaded cleanly ... [2s/2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
• checking loading without being on the library search path ... [2s/2s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [14s/17s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [2s/2s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [5s/6s] OK   Running ‘testthat.R’ [5s/6s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [3s/4s] OK
• checking PDF version of manual ... [5s/8s] OK
• checking HTML version of manual ... [2s/2s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp00vamR’ ‘~/tmp/scratch/Rtmp0PfY7n’   ‘~/tmp/scratch/Rtmp0Sk2n9’ ‘~/tmp/scratch/Rtmp0eEoSx’   ‘~/tmp/scratch/Rtmp0r3eq6’ ‘~/tmp/scratch/Rtmp156erh’   ‘~/tmp/scratch/Rtmp1HjXL9’ ‘~/tmp/scratch/Rtmp1e1Mdu’   ‘~/tmp/scratch/Rtmp1sNHHi’ ‘~/tmp/scratch/Rtmp1w3Fp3’   ‘~/tmp/scratch/Rtmp3HCoPf’ ‘~/tmp/scratch/Rtmp3XQIuL’   ‘~/tmp/scratch/Rtmp3xmEds’ ‘~/tmp/scratch/Rtmp4oc3ap’   ‘~/tmp/scratch/Rtmp4zQQ6x’ ‘~/tmp/scratch/Rtmp55f7Fo’   ‘~/tmp/scratch/Rtmp5IkVOp’ ‘~/tmp/scratch/Rtmp6dzcD8’   ‘~/tmp/scratch/Rtmp7MUvCE’ ‘~/tmp/scratch/Rtmp7zaLkr’   ‘~/tmp/scratch/Rtmp8sklUO’ ‘~/tmp/scratch/Rtmp9MUnte’   ‘~/tmp/scratch/RtmpAPEkon’ ‘~/tmp/scratch/RtmpAWGG5F’   ‘~/tmp/scratch/RtmpB4tWXa’ ‘~/tmp/scratch/RtmpB5MczV’   ‘~/tmp/scratch/RtmpB6oKwQ’ ‘~/tmp/scratch/RtmpBlIKem’   ‘~/tmp/scratch/RtmpC4kfFt’ ‘~/tmp/scratch/RtmpCaGGHb’   ‘~/tmp/scratch/RtmpDqk0zP’ ‘~/tmp/scratch/RtmpDuuHgA’   ‘~/tmp/scratch/RtmpEMGzwS’ ‘~/tmp/scratch/RtmpErIaeu’   ‘~/tmp/scratch/RtmpH0DUUS’ ‘~/tmp/scratch/RtmpHWVCBz’   ‘~/tmp/scratch/RtmpHZgRJQ’ ‘~/tmp/scratch/RtmpIHCNbb’   ‘~/tmp/scratch/RtmpIcZx6g’ ‘~/tmp/scratch/RtmpIfkVEC’   ‘~/tmp/scratch/RtmpJGwQRO’ ‘~/tmp/scratch/RtmpJVVTy2’   ‘~/tmp/scratch/RtmpJyouf8’ ‘~/tmp/scratch/RtmpJyyMJa’   ‘~/tmp/scratch/RtmpKRBBlo’ ‘~/tmp/scratch/RtmpLOfDkI’   ‘~/tmp/scratch/RtmpLahHM1’ ‘~/tmp/scratch/RtmpM2Ssk6’   ‘~/tmp/scratch/RtmpMap0Ym’ ‘~/tmp/scratch/RtmpMxwXI3’   ‘~/tmp/scratch/RtmpN1Nkjq’ ‘~/tmp/scratch/RtmpNbcyn6’   ‘~/tmp/scratch/RtmpOLgQJT’ ‘~/tmp/scratch/RtmpOxlqzg’   ‘~/tmp/scratch/RtmpPxwvQN’ ‘~/tmp/scratch/RtmpQaqyIG’   ‘~/tmp/scratch/RtmpRDekGJ’ ‘~/tmp/scratch/RtmpRGJNGg’   ‘~/tmp/scratch/RtmpRNQMJZ’ ‘~/tmp/scratch/RtmpT0Rebd’   ‘~/tmp/scratch/RtmpTPxHsC’ ‘~/tmp/scratch/RtmpTQkvkx’   ‘~/tmp/scratch/RtmpTWbv2r’ ‘~/tmp/scratch/RtmpTYcQUQ’   ‘~/tmp/scratch/RtmpU2Y38C’ ‘~/tmp/scratch/RtmpU6bxxo’   ‘~/tmp/scratch/RtmpUmLQzD’ ‘~/tmp/scratch/RtmpUqSlGK’   ‘~/tmp/scratch/RtmpVbF7zr’ ‘~/tmp/scratch/RtmpWoinff’   ‘~/tmp/scratch/RtmpWpnk0n’ ‘~/tmp/scratch/RtmpX43fnD’   ‘~/tmp/scratch/RtmpXS7VYc’ ‘~/tmp/scratch/RtmpXdZAfZ’   ‘~/tmp/scratch/RtmpXlwXZY’ ‘~/tmp/scratch/RtmpY3cO7S’   ‘~/tmp/scratch/RtmpY8AjO9’ ‘~/tmp/scratch/RtmpZcHCUJ’   ‘~/tmp/scratch/RtmpaEnX1m’ ‘~/tmp/scratch/RtmpcHMBx5’   ‘~/tmp/scratch/RtmpcMRmDV’ ‘~/tmp/scratch/RtmpckfeEE’   ‘~/tmp/scratch/Rtmpd1xqEL’ ‘~/tmp/scratch/Rtmpd7SXKh’   ‘~/tmp/scratch/Rtmpd9UuLv’ ‘~/tmp/scratch/RtmpdC8Be7’   ‘~/tmp/scratch/Rtmpdegew2’ ‘~/tmp/scratch/RtmpdfAhpd’   ‘~/tmp/scratch/Rtmpdh87w3’ ‘~/tmp/scratch/RtmpdlTrXX’   ‘~/tmp/scratch/Rtmpds1EJD’ ‘~/tmp/scratch/RtmpeBeN8O’   ‘~/tmp/scratch/Rtmpeoya2i’ ‘~/tmp/scratch/RtmpfXWRhm’   ‘~/tmp/scratch/Rtmpg1mHcH’ ‘~/tmp/scratch/Rtmph6v9X8’   ‘~/tmp/scratch/RtmphUMx65’ ‘~/tmp/scratch/RtmpiEnwgH’   ‘~/tmp/scratch/RtmpiKrUl9’ ‘~/tmp/scratch/RtmpiTZFnl’   ‘~/tmp/scratch/Rtmpibomc1’ ‘~/tmp/scratch/RtmpignnhM’   ‘~/tmp/scratch/RtmpjFrs39’ ‘~/tmp/scratch/RtmpjMUvMF’   ‘~/tmp/scratch/RtmpjQRlme’ ‘~/tmp/scratch/RtmpjewFhH’   ‘~/tmp/scratch/Rtmpk5s8Ks’ ‘~/tmp/scratch/RtmpkKV6ig’   ‘~/tmp/scratch/RtmpkVrNSX’ ‘~/tmp/scratch/RtmpkzhOl1’   ‘~/tmp/scratch/RtmplpLX1a’ ‘~/tmp/scratch/RtmpmQJ2pW’   ‘~/tmp/scratch/RtmpmlyBTO’ ‘~/tmp/scratch/Rtmpne8FKH’   ‘~/tmp/scratch/RtmpnsXIqX’ ‘~/tmp/scratch/Rtmpnt1vK9’   ‘~/tmp/scratch/Rtmpo6zdKY’ ‘~/tmp/scratch/Rtmpod2nVE’   ‘~/tmp/scratch/Rtmpog9sTm’ ‘~/tmp/scratch/RtmppJhKmW’   ‘~/tmp/scratch/RtmppQiTaP’ ‘~/tmp/scratch/RtmppU1o6i’   ‘~/tmp/scratch/RtmpruUQh7’ ‘~/tmp/scratch/Rtmps2cUL6’   ‘~/tmp/scratch/RtmpspjU1q’ ‘~/tmp/scratch/RtmptgZgsT’   ‘~/tmp/scratch/RtmptguH4i’ ‘~/tmp/scratch/RtmptwGKAD’   ‘~/tmp/scratch/RtmpuAIvED’ ‘~/tmp/scratch/RtmpuBiqDA’   ‘~/tmp/scratch/RtmpuRh1TE’ ‘~/tmp/scratch/Rtmpukqkqu’   ‘~/tmp/scratch/RtmpuwHnNL’ ‘~/tmp/scratch/Rtmpv5LvW7’   ‘~/tmp/scratch/RtmpvCaTzt’ ‘~/tmp/scratch/RtmpvJ6pP1’   ‘~/tmp/scratch/RtmpvnUm8j’ ‘~/tmp/scratch/RtmpwpevUy’   ‘~/tmp/scratch/RtmpwstvIl’ ‘~/tmp/scratch/RtmpxEC454’   ‘~/tmp/scratch/RtmpxvKC8G’ ‘~/tmp/scratch/RtmpyR7SdH’   ‘~/tmp/scratch/RtmpyvN4sB’ ‘~/tmp/scratch/Rtmpz89psm’   ‘~/tmp/scratch/RtmpzSfjr1’ ‘~/tmp/scratch/RtmpzSnpmO’   ‘~/tmp/scratch/quarto-session77f05521f003f882’   ‘~/tmp/scratch/xvfb-run.0WD7l8’ ‘~/tmp/scratch/xvfb-run.23Gddf’   ‘~/tmp/scratch/xvfb-run.2Hp0HB’ ‘~/tmp/scratch/xvfb-run.3V04OI’   ‘~/tmp/scratch/xvfb-run.4KMAWo’ ‘~/tmp/scratch/xvfb-run.4wHgBf’   ‘~/tmp/scratch/xvfb-run.5GRZa9’ ‘~/tmp/scratch/xvfb-run.7lmWFO’   ‘~/tmp/scratch/xvfb-run.8itqdd’ ‘~/tmp/scratch/xvfb-run.9Nfrie’   ‘~/tmp/scratch/xvfb-run.AaztNG’ ‘~/tmp/scratch/xvfb-run.Brh7nc’   ‘~/tmp/scratch/xvfb-run.CJnl8K’ ‘~/tmp/scratch/xvfb-run.D6MQZa’   ‘~/tmp/scratch/xvfb-run.DTEQGa’ ‘~/tmp/scratch/xvfb-run.DqPOYs’   ‘~/tmp/scratch/xvfb-run.Dt5W8l’ ‘~/tmp/scratch/xvfb-run.E68fdw’   ‘~/tmp/scratch/xvfb-run.Heby0P’ ‘~/tmp/scratch/xvfb-run.IVV05S’   ‘~/tmp/scratch/xvfb-run.J7EyRJ’ ‘~/tmp/scratch/xvfb-run.Lsnf5P’   ‘~/tmp/scratch/xvfb-run.MAKWMU’ ‘~/tmp/scratch/xvfb-run.NzrQ3I’   ‘~/tmp/scratch/xvfb-run.OkhdHH’ ‘~/tmp/scratch/xvfb-run.P3xW5X’   ‘~/tmp/scratch/xvfb-run.PbdAzR’ ‘~/tmp/scratch/xvfb-run.Po7tGr’   ‘~/tmp/scratch/xvfb-run.QXfUEX’ ‘~/tmp/scratch/xvfb-run.RP6bez’   ‘~/tmp/scratch/xvfb-run.RTKJvO’ ‘~/tmp/scratch/xvfb-run.V27Vcf’   ‘~/tmp/scratch/xvfb-run.VVdzrg’ ‘~/tmp/scratch/xvfb-run.XAYRvs’   ‘~/tmp/scratch/xvfb-run.aW1DUM’ ‘~/tmp/scratch/xvfb-run.baBczW’   ‘~/tmp/scratch/xvfb-run.cnMIcm’ ‘~/tmp/scratch/xvfb-run.dE5Rwr’   ‘~/tmp/scratch/xvfb-run.e72eJg’ ‘~/tmp/scratch/xvfb-run.gQ6e8p’   ‘~/tmp/scratch/xvfb-run.gQNgGS’ ‘~/tmp/scratch/xvfb-run.ggctIt’   ‘~/tmp/scratch/xvfb-run.iJecii’ ‘~/tmp/scratch/xvfb-run.iuXUgd’   ‘~/tmp/scratch/xvfb-run.kIjzMR’ ‘~/tmp/scratch/xvfb-run.lk1dh3’   ‘~/tmp/scratch/xvfb-run.nXVxSh’ ‘~/tmp/scratch/xvfb-run.nqSpNV’   ‘~/tmp/scratch/xvfb-run.p5HRIo’ ‘~/tmp/scratch/xvfb-run.p7PTQg’   ‘~/tmp/scratch/xvfb-run.q6FwZ5’ ‘~/tmp/scratch/xvfb-run.rrf3JX’   ‘~/tmp/scratch/xvfb-run.rxnrxa’ ‘~/tmp/scratch/xvfb-run.sMIWzp’   ‘~/tmp/scratch/xvfb-run.sOppdd’ ‘~/tmp/scratch/xvfb-run.t8z7qB’   ‘~/tmp/scratch/xvfb-run.w4ngTP’ ‘~/tmp/scratch/xvfb-run.yuX6Vg’   ‘~/tmp/scratch/xvfb-run.zmyPtt’
• DONE

Status: 2 NOTEs